| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689182
Identifier: 116689182
GI number: 116689182
Start: 1271704
End: 1272768
Strand: Direct
Name: 116689182
Synonym: Bcen2424_1160
Alternate gene names: NA
Gene position: 1271704-1272768 (Clockwise)
Preceding gene: 116689180
Following gene: 116689183
Centisome position: 36.5
GC content: 64.98
Gene sequence:
>1065_bases ATGCGAATCGCCCAAATCGCTCCGTTGCATGAAGCGGTGCCCCCGAAACTGTACGGTGGTACCGAGCGAGTGGTGTCCTA CCTCACCGAAGCACTCGTCGAGATGGGGCATGACGTCACGCTCTTCGCGAGCGGCGATTCGCAGACCTCCGCGAAGCTCG AAGCGTGCTGGCCGCAGGCGCTGCGCCTCGACCCGACGATCCGCGACGTGATGGCCCCGCACATGCTGCTGCTCGAGCAG GTGCGCCGCCGCGCGGAAGAGTTCGACGTCCTGCACTGCCACATCGACTACTACCCGTTCTCGCTGTTCTCGCGTCAGCC GGTCCCGCATCTGACGACGATGCACGGCCGTCTCGACCTGCCGGAACTGCAGCCGATCTTCAATGCGTTCAGCGACGTGC CGGTCGTGTCGATCTCCGACAACCAGCGCATCCCGCTGCCGCAGGCGAACTGGCTGTCGACCGTCTACCACGGCCTGCCG GAAAACCTGCTGACGCCGATCCCGAACGTGAAGCCGAGCTACCTCGCGTTCCTCGGCCGCATCTCGCCGGAAAAGCGCGT CGACACGGCGATCCGCATCGCCGAACAGGCCGGCCTGCCGATCAAGATCGCCGCGAAGCTCGACAAGGCCGACCGCGCGT ACTACGAAGAGAAGATCAAGCCGCTGTTCGCGCTGCCGCACGTCGAGTACATCGGCGAAATCAGCGAGTCGGAGAAGACC GAATTCCTCGGCAACGCGCATGCGCTGCTGTTCCCGATCGACTGGCCGGAGCCCTTCGGCCTGGTGATGATCGAGGCGAT GGCCTGCGGCACGCCGGTGATCGCGTTCAAGCGCGGCTCGGTGCCGGAAGTGATCGACAACGGCGTGTCGGGCTTCGTCG TCGAAGACGAACTGTCGGCCGTCGCCGCGCTCAAGCGCCTCGATACGCTGCCGCGCGAGAAGGTTCGCGCCGCATTCGAA GCCCGTTTCTCGTCGAAGGTGATGGCGCAGAACTACGTGAAGGGCTACGAGGAACTGCTGCGCCAGAAGCGCCGCACGGT GCTCCGCGAAGTCAACGCAAGCTGA
Upstream 100 bases:
>100_bases GGCTGATTCGTCCGAGGTTCGGACGACATGTATCCAGCCCGGACCACCGGCAGGTTGCCGACCCATACCTGGTTTTTTGC CGATTTTTTAGGAGTTACGC
Downstream 100 bases:
>100_bases TTGCGGGCCGCCGCCGCATGGCGGCGCGCGGCCGTCACGACGCCCCGTCCGGGTTTTCCGGCGGGGCGTTGTCACATCTG CGGCGCGGATGTGTTGTATT
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Group 1 Glycosyl Transferase; Glycosyl Transferase; UDP-GlucoseTetrahydrobiopterin Glucosyltransferase; Sugar Transferase; Glycosyl Transferase Group 1 Protein; Group 1 Glycosyl Transferase Protein; Mannose-6-Phosphate Isomerase Bifunctional; Galactosyltransferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyltransferase Group I; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Hydrolase; Hexosyltransferase; Glycosyl Transferase Family Protein; Glycogen Synthase; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Mannose-6-Phosphate Isomerase Type II; UDP-Glycosyltransferase/Glycogen Phosphorylase
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEACWPQALRLDPTIRDVMAPHMLLLEQ VRRRAEEFDVLHCHIDYYPFSLFSRQPVPHLTTMHGRLDLPELQPIFNAFSDVPVVSISDNQRIPLPQANWLSTVYHGLP ENLLTPIPNVKPSYLAFLGRISPEKRVDTAIRIAEQAGLPIKIAAKLDKADRAYYEEKIKPLFALPHVEYIGEISESEKT EFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIDNGVSGFVVEDELSAVAALKRLDTLPREKVRAAFE ARFSSKVMAQNYVKGYEELLRQKRRTVLREVNAS
Sequences:
>Translated_354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEACWPQALRLDPTIRDVMAPHMLLLEQ VRRRAEEFDVLHCHIDYYPFSLFSRQPVPHLTTMHGRLDLPELQPIFNAFSDVPVVSISDNQRIPLPQANWLSTVYHGLP ENLLTPIPNVKPSYLAFLGRISPEKRVDTAIRIAEQAGLPIKIAAKLDKADRAYYEEKIKPLFALPHVEYIGEISESEKT EFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIDNGVSGFVVEDELSAVAALKRLDTLPREKVRAAFE ARFSSKVMAQNYVKGYEELLRQKRRTVLREVNAS >Mature_354_residues MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEACWPQALRLDPTIRDVMAPHMLLLEQ VRRRAEEFDVLHCHIDYYPFSLFSRQPVPHLTTMHGRLDLPELQPIFNAFSDVPVVSISDNQRIPLPQANWLSTVYHGLP ENLLTPIPNVKPSYLAFLGRISPEKRVDTAIRIAEQAGLPIKIAAKLDKADRAYYEEKIKPLFALPHVEYIGEISESEKT EFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIDNGVSGFVVEDELSAVAALKRLDTLPREKVRAAFE ARFSSKVMAQNYVKGYEELLRQKRRTVLREVNAS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39732; Mature: 39732
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEACWPQA CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCHHH LRLDPTIRDVMAPHMLLLEQVRRRAEEFDVLHCHIDYYPFSLFSRQPVPHLTTMHGRLDL HCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCCHHHCCCCCCC PELQPIFNAFSDVPVVSISDNQRIPLPQANWLSTVYHGLPENLLTPIPNVKPSYLAFLGR HHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC ISPEKRVDTAIRIAEQAGLPIKIAAKLDKADRAYYEEKIKPLFALPHVEYIGEISESEKT CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHCCCHHHHHHHCHHHHH EFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIDNGVSGFVVEDELSA HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH VAALKRLDTLPREKVRAAFEARFSSKVMAQNYVKGYEELLRQKRRTVLREVNAS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIAQIAPLHEAVPPKLYGGTERVVSYLTEALVEMGHDVTLFASGDSQTSAKLEACWPQA CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCHHH LRLDPTIRDVMAPHMLLLEQVRRRAEEFDVLHCHIDYYPFSLFSRQPVPHLTTMHGRLDL HCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCCHHHCCCCCCC PELQPIFNAFSDVPVVSISDNQRIPLPQANWLSTVYHGLPENLLTPIPNVKPSYLAFLGR HHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHC ISPEKRVDTAIRIAEQAGLPIKIAAKLDKADRAYYEEKIKPLFALPHVEYIGEISESEKT CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHCCCHHHHHHHCHHHHH EFLGNAHALLFPIDWPEPFGLVMIEAMACGTPVIAFKRGSVPEVIDNGVSGFVVEDELSA HHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCEEEHHHHHH VAALKRLDTLPREKVRAAFEARFSSKVMAQNYVKGYEELLRQKRRTVLREVNAS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA