| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is bcr [H]
Identifier: 116688987
GI number: 116688987
Start: 1069923
End: 1071140
Strand: Direct
Name: bcr [H]
Synonym: Bcen2424_0964
Alternate gene names: 116688987
Gene position: 1069923-1071140 (Clockwise)
Preceding gene: 116688976
Following gene: 116688991
Centisome position: 30.71
GC content: 70.61
Gene sequence:
>1218_bases ATGTCCCACGTCGTCCGGCGCCGGCCCGATGCCCGGCTGATCCTGTTGCTCGGCGCGCTCGCGGCCTGCGGGCCGATCGC CACCGACATGTACCTGCCGAGCCTGCCGTCGATCGCCGCGGGCTTCTCCGTCAGCGCCGGCGCCGCGCAGCGCACGCTGA CGAGCTTCATGGCCGGCTTCTCGATCGGCATGCTGCTGTACGGCCCGCTGTCCGACACGTGGGGCCGCCGCCCCGTGCTG CTCGGCGGGATCGCGCTGTTCACGCTCGCGAGTATCGGCTGCTTCGTGGCGGGTTCGATCGACATGCTGATCGTCGTGCG CTTTTTGCAGGCGCTCGGCGCCGGCGCCGCGTCGGTGCTCGCGCGGGCGATCGCGCGCGACGCGCACGAGCCGAGCGACG CGGCGAAGGTGCTGTCGATGGTCGCGATCGTTACCGCGGTCGGGCCGCTGCTCGCGCCGCTGATCGGCGGCCAGATCCTG CGTTTCTCCGGCTGGCGCGGCGTGTTCGTCGTGCTGGCCGTGTTCGGCGCGCTCTGCGCGACGACCGCGTACCTGCGCGT GCCCGAAACCTGGCCGAAGGAGCGGCGCAAGAGCGCGGCCGTGCTCGCGTCGTTCGCGTCGTACGGGCGCATCCTGTCCG ACCCCGTCGCATGGGGGCACATGCTGTGCGGCGGGATGGCGTTCGCATCGATGTTCTCGTACATCACCGCGACGCCGTTC GTGTACATCGAGTATTTCCACGTGTCGCCGCAGCACTACGGGCTGCTGTTCGGCCTGAACGTCGTCGGGATCATGATCGG CAACTTCGCGAACTCGCGGCTCGTCGGCCGCATCGGTTCGCTGCGCATCATCGCGGCCGCGTCGCTCGTGAGCTGCATCG CGTCGCTCGCGGTCGCGTTCGTCGCGCTGACCGGATTGGGCGGGCTGTGGTCGATCGTCGTGTGCCTGTTCTTCGTCGTC GGCGTGGTCGGGATCCTGTCCGCGAACTGCACGACCGACCTGATGCATCGCTATCCGCACAACGCGGGCGCGTCGGCGGC CGTGTTCGGCGCGATGCAGCTCGCGCTCGGCGCGCTGGCGAGCGTCGCGATCGGCGCACTCGCGGACGGCACGCCGTTCG CGATGGGCGTGACGATCGGTGTGTCGGGCCTGCTGTGCTTCGCCGGGCGCTATCTGGTGCTGCGCTGGCACGGCCGGCCG GTGAAAGCGGGCGCCTGA
Upstream 100 bases:
>100_bases CGCGTACAATCATGGGCCTGAACGCGCCGCTTGCGGCGCGGCTTCCCGTCTTCACCGCCACGCGTGCCCCGATGCGCGCG GGCTCCCATTCCGGATACCC
Downstream 100 bases:
>100_bases ACCGCGCCGCCCGCCGGGTCGCACAATGAAAAACGCCACCGCGCGCGATGCGCCGGTGGCGTTTTTCGTTGGGACGCGTG AAGCGGCTGACGCCGCGCCA
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSHVVRRRPDARLILLLGALAACGPIATDMYLPSLPSIAAGFSVSAGAAQRTLTSFMAGFSIGMLLYGPLSDTWGRRPVL LGGIALFTLASIGCFVAGSIDMLIVVRFLQALGAGAASVLARAIARDAHEPSDAAKVLSMVAIVTAVGPLLAPLIGGQIL RFSGWRGVFVVLAVFGALCATTAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANSRLVGRIGSLRIIAAASLVSCIASLAVAFVALTGLGGLWSIVVCLFFVV GVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGVSGLLCFAGRYLVLRWHGRP VKAGA
Sequences:
>Translated_405_residues MSHVVRRRPDARLILLLGALAACGPIATDMYLPSLPSIAAGFSVSAGAAQRTLTSFMAGFSIGMLLYGPLSDTWGRRPVL LGGIALFTLASIGCFVAGSIDMLIVVRFLQALGAGAASVLARAIARDAHEPSDAAKVLSMVAIVTAVGPLLAPLIGGQIL RFSGWRGVFVVLAVFGALCATTAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANSRLVGRIGSLRIIAAASLVSCIASLAVAFVALTGLGGLWSIVVCLFFVV GVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGVSGLLCFAGRYLVLRWHGRP VKAGA >Mature_404_residues SHVVRRRPDARLILLLGALAACGPIATDMYLPSLPSIAAGFSVSAGAAQRTLTSFMAGFSIGMLLYGPLSDTWGRRPVLL GGIALFTLASIGCFVAGSIDMLIVVRFLQALGAGAASVLARAIARDAHEPSDAAKVLSMVAIVTAVGPLLAPLIGGQILR FSGWRGVFVVLAVFGALCATTAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPFV YIEYFHVSPQHYGLLFGLNVVGIMIGNFANSRLVGRIGSLRIIAAASLVSCIASLAVAFVALTGLGGLWSIVVCLFFVVG VVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALASVAIGALADGTPFAMGVTIGVSGLLCFAGRYLVLRWHGRPV KAGA
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=397, Percent_Identity=35.7682619647355, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI48994889, Length=395, Percent_Identity=29.620253164557, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1790146, Length=202, Percent_Identity=34.6534653465347, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI87082312, Length=344, Percent_Identity=28.1976744186047, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787065, Length=257, Percent_Identity=27.6264591439689, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1790794, Length=223, Percent_Identity=24.6636771300448, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790195, Length=138, Percent_Identity=29.7101449275362, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319657, Length=168, Percent_Identity=27.9761904761905, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324264, Length=178, Percent_Identity=24.7191011235955, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322071, Length=165, Percent_Identity=28.4848484848485, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42038; Mature: 41907
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVVRRRPDARLILLLGALAACGPIATDMYLPSLPSIAAGFSVSAGAAQRTLTSFMAGF CCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHH SIGMLLYGPLSDTWGRRPVLLGGIALFTLASIGCFVAGSIDMLIVVRFLQALGAGAASVL HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHH ARAIARDAHEPSDAAKVLSMVAIVTAVGPLLAPLIGGQILRFSGWRGVFVVLAVFGALCA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH TTAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCE VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANSRLVGRIGSLRIIAAASLVSCIASLAVAF EEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH VALTGLGGLWSIVVCLFFVVGVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALA HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SVAIGALADGTPFAMGVTIGVSGLLCFAGRYLVLRWHGRPVKAGA HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC >Mature Secondary Structure SHVVRRRPDARLILLLGALAACGPIATDMYLPSLPSIAAGFSVSAGAAQRTLTSFMAGF CCCHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHH SIGMLLYGPLSDTWGRRPVLLGGIALFTLASIGCFVAGSIDMLIVVRFLQALGAGAASVL HHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHH ARAIARDAHEPSDAAKVLSMVAIVTAVGPLLAPLIGGQILRFSGWRGVFVVLAVFGALCA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH TTAYLRVPETWPKERRKSAAVLASFASYGRILSDPVAWGHMLCGGMAFASMFSYITATPF HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCE VYIEYFHVSPQHYGLLFGLNVVGIMIGNFANSRLVGRIGSLRIIAAASLVSCIASLAVAF EEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH VALTGLGGLWSIVVCLFFVVGVVGILSANCTTDLMHRYPHNAGASAAVFGAMQLALGALA HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SVAIGALADGTPFAMGVTIGVSGLLCFAGRYLVLRWHGRPVKAGA HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]