Click here to switch to the map view.

The map label for this gene is 116688976

Identifier: 116688976

GI number: 116688976

Start: 1059760

End: 1060896

Strand: Direct

Name: 116688976

Synonym: Bcen2424_0953

Alternate gene names: NA

Gene position: 1059760-1060896 (Clockwise)

Preceding gene: 116688973

Following gene: 116688987

Centisome position: 30.42

GC content: 68.87

Gene sequence:

>1137_bases
ATGAACGCTTGGTTATCGTGGCGTCCCACTGAGCAGCATGCGCAAATCGTGCGCAACTTGCTGCGTCGCGGGACGCGTGT
CAGTCACCATCTATTCAGCGTTGTCGGCTGTTTCGCTGTCGCGGTTGCGCTTGCACTGTGGCTGCTGCCAACCGTCCGCG
GCACGCTTGCCGCGAAGCTGATGCCGGTCGTATCCGCGGCCGTGCAGGCCGGTCCGGCGCGTCTGCTGTCCGGCCATCCG
CTGCCGAACTTCGCGCCTGCCGGTGCGCAGCCGCAGCAGGAAGACGGTCCCGAAACGGATGCGCTGGCGGTCGGCCTCGA
TGTCGCGCCGGAAACCGCCGCGCAGGGCGCTCAAGGCCCGCAGGGCGATGCGTCCGATCCGGCCCGCACCGGCCCGTCGC
CGGTCGCACTGGCCAAGCTGATTCCGATTCAGCGCGTGGCGGCCGATGCCCGCGACGACCGCGCGCTCGCGTCGAACCGC
GAACAGGCGCTCGTTGCCACTTATCTGTCGCGCCGTTACCGCGTCGCGCAGGAGCCGCTCGGCCAACTCGTCAAGGCTGC
GTTCCAGACCGGTCGTGACGTCGGCCTGGACCCGCTGCTGCTGCTGTCCGTGATGGCGATCGAATCGGGCTTCAACCCGT
ATGCCGAAAGCGGTGTCGGCGCGAAGGGGCTGATGCAGGTCATGTCGAAGGTCCATTCCGACAAGTTCGAGTATTTCGGC
GGCACCGACACCGCGCTGCAGCCGCTCGCGAACCTGCAGGTCGGCGCACTGGTGCTGAAGGATTGCATCGCGCGCGGCGG
CTCGCTCGCGAATGGCCTGCGTCTGTATAACGGCTCGACGAACCCCGACGACAACGGCTACGGCTCGAAGGTGATGGCCG
AGCGCGGTCGCCTGCGCGACGTCGCGCGTGGCCGCAGCGTGCCGATCAACGCGCCGCAGGCGCCCGCGCAACCCGCGAAG
CCGATCGTCACCGCCGCTGCCGTGACGGCCGCAGCCGGCGGCGCGAAGCGCGTGCATGCGACGCTCGACGGTACGACCTC
GGTCAAGGCGGCGCCGAAGGAAGCCGCGTCGCAGGACGACGCGAGCGTCGATACCGCGAAGCAGTCGCACGCCGATCATT
CGGAGCTCGGCGCGTAA

Upstream 100 bases:

>100_bases
CCCAACCAAGGCGTGCGGCGTCGTGATTCCGCGGCGCGTTTTCTGTCTCGCCTTCGAGCTGAGCGAGCCGCACGAGTCAT
GTTCATGGGAGATGATCTGA

Downstream 100 bases:

>100_bases
CGTCGCAGGCGCCGTGCGGCTTCGGCCGGCACGACTGGGCATGAGAAAGGCACCCGATTCGGGTGCCTTTTCTTTTTTGC
GGTGTGTGAAGCGCCCGGTG

Product: lytic transglycosylase, catalytic

Products: NA

Alternate protein names: Transglycosylase; Lytic Transglycosylase; Transglycosylase SLT Family Protein; Transglycosylase SLT Family; Transmembrane Transglycosylase SLT Family Protein; Transglycosylase SLT Domain-Containing Lipoprotein; Transmembrane Protein; Transglycosylase Protein; Transglycosylase SLT Domain-Containing

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNAWLSWRPTEQHAQIVRNLLRRGTRVSHHLFSVVGCFAVAVALALWLLPTVRGTLAAKLMPVVSAAVQAGPARLLSGHP
LPNFAPAGAQPQQEDGPETDALAVGLDVAPETAAQGAQGPQGDASDPARTGPSPVALAKLIPIQRVAADARDDRALASNR
EQALVATYLSRRYRVAQEPLGQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAKGLMQVMSKVHSDKFEYFG
GTDTALQPLANLQVGALVLKDCIARGGSLANGLRLYNGSTNPDDNGYGSKVMAERGRLRDVARGRSVPINAPQAPAQPAK
PIVTAAAVTAAAGGAKRVHATLDGTTSVKAAPKEAASQDDASVDTAKQSHADHSELGA

Sequences:

>Translated_378_residues
MNAWLSWRPTEQHAQIVRNLLRRGTRVSHHLFSVVGCFAVAVALALWLLPTVRGTLAAKLMPVVSAAVQAGPARLLSGHP
LPNFAPAGAQPQQEDGPETDALAVGLDVAPETAAQGAQGPQGDASDPARTGPSPVALAKLIPIQRVAADARDDRALASNR
EQALVATYLSRRYRVAQEPLGQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAKGLMQVMSKVHSDKFEYFG
GTDTALQPLANLQVGALVLKDCIARGGSLANGLRLYNGSTNPDDNGYGSKVMAERGRLRDVARGRSVPINAPQAPAQPAK
PIVTAAAVTAAAGGAKRVHATLDGTTSVKAAPKEAASQDDASVDTAKQSHADHSELGA
>Mature_378_residues
MNAWLSWRPTEQHAQIVRNLLRRGTRVSHHLFSVVGCFAVAVALALWLLPTVRGTLAAKLMPVVSAAVQAGPARLLSGHP
LPNFAPAGAQPQQEDGPETDALAVGLDVAPETAAQGAQGPQGDASDPARTGPSPVALAKLIPIQRVAADARDDRALASNR
EQALVATYLSRRYRVAQEPLGQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAKGLMQVMSKVHSDKFEYFG
GTDTALQPLANLQVGALVLKDCIARGGSLANGLRLYNGSTNPDDNGYGSKVMAERGRLRDVARGRSVPINAPQAPAQPAK
PIVTAAAVTAAAGGAKRVHATLDGTTSVKAAPKEAASQDDASVDTAKQSHADHSELGA

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39289; Mature: 39289

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAWLSWRPTEQHAQIVRNLLRRGTRVSHHLFSVVGCFAVAVALALWLLPTVRGTLAAKL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPVVSAAVQAGPARLLSGHPLPNFAPAGAQPQQEDGPETDALAVGLDVAPETAAQGAQGP
HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCC
QGDASDPARTGPSPVALAKLIPIQRVAADARDDRALASNREQALVATYLSRRYRVAQEPL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAKGLMQVMSKVHSDKFEYFG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCC
GTDTALQPLANLQVGALVLKDCIARGGSLANGLRLYNGSTNPDDNGYGSKVMAERGRLRD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
VARGRSVPINAPQAPAQPAKPIVTAAAVTAAAGGAKRVHATLDGTTSVKAAPKEAASQDD
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHCCCCC
ASVDTAKQSHADHSELGA
CHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MNAWLSWRPTEQHAQIVRNLLRRGTRVSHHLFSVVGCFAVAVALALWLLPTVRGTLAAKL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPVVSAAVQAGPARLLSGHPLPNFAPAGAQPQQEDGPETDALAVGLDVAPETAAQGAQGP
HHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCCC
QGDASDPARTGPSPVALAKLIPIQRVAADARDDRALASNREQALVATYLSRRYRVAQEPL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAKGLMQVMSKVHSDKFEYFG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCC
GTDTALQPLANLQVGALVLKDCIARGGSLANGLRLYNGSTNPDDNGYGSKVMAERGRLRD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
VARGRSVPINAPQAPAQPAKPIVTAAAVTAAAGGAKRVHATLDGTTSVKAAPKEAASQDD
HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHCCCCC
ASVDTAKQSHADHSELGA
CHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA