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The map label for this gene is intD [C]

Identifier: 116688949

GI number: 116688949

Start: 1032954

End: 1034099

Strand: Reverse

Name: intD [C]

Synonym: Bcen2424_0926

Alternate gene names: 116688949

Gene position: 1034099-1032954 (Counterclockwise)

Preceding gene: 116688950

Following gene: 116688944

Centisome position: 29.68

GC content: 56.37

Gene sequence:

>1146_bases
ATGACACTCATCCGTCGAAACAACAGCAAGAACTGGTACTACCAGTTCCAGATTCAAGGCAAGAAGTTCTTCGGCTCGAC
CGGGACGCCGAACAAGACGAAGGCCGCTCAGGTCGAACGTGAGATGCGCAATCGCGCCCACGCCGAGCAGTACCTCGGGG
ATGCGCAGCCCATCACGCTCAAAGATGCGCTGGAACAATATGTCGAGGCACGAAGCGAAACGTCCTATCACCGGAACATG
TGCTCGATCGTTCGGAAAACGCTCGGCTATAAGCTTCATCCGAGAACGAAGGCCAAGCTCCCCTGCTATGGCATGTCGCC
TGATACGCTGCTTCATGAACTGACAACGCGGTATTTCGATCTTCTCGTTGCGAAGCGCAAGGCTGAGGGCGACAAGCCTG
CGACGATCAAGCACGAGATCGGACTGCTTCGCGCGACGATCAACGAGATGGCGAAGCTCGGATTCAAAGTCAGTCGTGAG
ATCGTTTTTCCAGAGCTTAGGACTTCGTATAGGCTTCGATATCTGGATTCTAACGACGAGTCGGCGTTATTGCGCGAACT
CGATCCGGAACGGCTTAGAGCGCGTATAAACGCGTCTAAACCGCAAACACCTGAAATGACGCGAAATATGCAGGATAACT
ACGATATCACGGTTTTCCTGCTCGATACGGGGTGCCGTTACTCGGAGGTCGCGAACACTCCGTGGTCGGCGATCAACCTC
GACGCGTGCACGATCAGCCTCTATCGGAGCAAGGTGCGGAATGAAGATGTGCTGCACATGACCTCCCGACTCGAAGCGAT
CCTCCGTCGGCGGTGGGAAGAACGCAGGACCGGACAGCGATACGTATTCGAAGACCGCACCGGCAACGAGCGCGGCTACA
GCACGAAGTCGATCAAGAAAGCAATCGAGCGCGCTGGGCTCAACGATCCGGTTCTGGTCAAGGAACGCGGCGGGCGCGTT
ACGCTGCACACGCTCCGTCACACGTTCGCGAGCAAGCTGGTCAAAGCGGGTGTCAGTCTCTATGAGGTATCGGTCCTGCT
CGGGCACAGCGATCCGAAAATGACGCAGCGCTATGCGCATCTGAGCCCGAACGATGCGAGCCGGAAAGCGGTCAAGATCA
TCGATTCGCTGCTCGAATCTGCTTGA

Upstream 100 bases:

>100_bases
TCCATTTTTTTGCATCTGGCATGGGCGGAAGCTGTTGTCATACCCCGGTCTCAGCCCGGATGGTGTTGCTCATCAATTAC
ATTCCGTAAGGAGCAACACG

Downstream 100 bases:

>100_bases
ATGTCGGGCGGGCCCTACGGGGCCGACTCAGAACCAACCAATCGTGTAAGGAAGTTGCTCTGTCATCATTTGAATCCCGG
ATGCCTCCCCCACTTGCCAG

Product: phage integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase XerD; Site-Specific Recombinase/Integrase; Tyrosine Recombinase XerD; Bacteriophage Integrase; Site Specific Recombinase

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITLKDALEQYVEARSETSYHRNM
CSIVRKTLGYKLHPRTKAKLPCYGMSPDTLLHELTTRYFDLLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSRE
IVFPELRTSYRLRYLDSNDESALLRELDPERLRARINASKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANTPWSAINL
DACTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKKAIERAGLNDPVLVKERGGRV
TLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAHLSPNDASRKAVKIIDSLLESA

Sequences:

>Translated_381_residues
MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITLKDALEQYVEARSETSYHRNM
CSIVRKTLGYKLHPRTKAKLPCYGMSPDTLLHELTTRYFDLLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSRE
IVFPELRTSYRLRYLDSNDESALLRELDPERLRARINASKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANTPWSAINL
DACTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKKAIERAGLNDPVLVKERGGRV
TLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAHLSPNDASRKAVKIIDSLLESA
>Mature_380_residues
TLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITLKDALEQYVEARSETSYHRNMC
SIVRKTLGYKLHPRTKAKLPCYGMSPDTLLHELTTRYFDLLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSREI
VFPELRTSYRLRYLDSNDESALLRELDPERLRARINASKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANTPWSAINLD
ACTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKKAIERAGLNDPVLVKERGGRVT
LHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAHLSPNDASRKAVKIIDSLLESA

Specific function: Integrase From The Cryptic Lambdoic Prophage Dlp12. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From Th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43905; Mature: 43774

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITL
CCEEEECCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEH
KDALEQYVEARSETSYHRNMCSIVRKTLGYKLHPRTKAKLPCYGMSPDTLLHELTTRYFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
LLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSREIVFPELRTSYRLRYLDSNDE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCH
SALLRELDPERLRARINASKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANTPWSAINL
HHHHHHCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEC
DACTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH
AIERAGLNDPVLVKERGGRVTLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAH
HHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHC
LSPNDASRKAVKIIDSLLESA
CCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLIRRNNSKNWYYQFQIQGKKFFGSTGTPNKTKAAQVEREMRNRAHAEQYLGDAQPITL
CEEEECCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEH
KDALEQYVEARSETSYHRNMCSIVRKTLGYKLHPRTKAKLPCYGMSPDTLLHELTTRYFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
LLVAKRKAEGDKPATIKHEIGLLRATINEMAKLGFKVSREIVFPELRTSYRLRYLDSNDE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEECCCCH
SALLRELDPERLRARINASKPQTPEMTRNMQDNYDITVFLLDTGCRYSEVANTPWSAINL
HHHHHHCCHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCCEEEC
DACTISLYRSKVRNEDVLHMTSRLEAILRRRWEERRTGQRYVFEDRTGNERGYSTKSIKK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHH
AIERAGLNDPVLVKERGGRVTLHTLRHTFASKLVKAGVSLYEVSVLLGHSDPKMTQRYAH
HHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHC
LSPNDASRKAVKIIDSLLESA
CCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA