Click here to switch to the map view.

The map label for this gene is 116688944

Identifier: 116688944

GI number: 116688944

Start: 1030031

End: 1030429

Strand: Reverse

Name: 116688944

Synonym: Bcen2424_0921

Alternate gene names: NA

Gene position: 1030429-1030031 (Counterclockwise)

Preceding gene: 116688949

Following gene: 116688943

Centisome position: 29.58

GC content: 60.9

Gene sequence:

>399_bases
ATGACTACCCGCCCTAGCTCGCCCCCCGACGATGCCCAAGACGCGCTGCTTGCTGCTCGTGTCGGAACTGCCATTGCCGA
ACAACGACGCGCACGCGGCCTGACACAGGCGAAGCTCGCGGAGATGATCGACCTGGAACAGGAAGCGGTCAGCCGATGGG
AGCGTGGCACTCGTGTGCCGACTTTGCATCGGCTCCAGCAGCTTAGTGATGCACTCAACTGCTCGGTAGACCAGTTGTTG
CAGCGCGGATCGAAGCGACCGGATGACCAACTGGCGATGATTGCGGACGCGCTCGATGGACTGGATAGCGACGAGCGGGA
ACTCGTCGTGAATTTCGTTCAGCAGTTCGCCGACATGCTAAGGGCCAAGCATCCTGCCAAGAAACTGGGGCGCAAGTAG

Upstream 100 bases:

>100_bases
GCACGATACGTCAACATCTCGACAAATTCAACCATATTGGAATACAACATTCCTAAATAGTTGTTCATCGTAATCGGAAT
GAAGACGACCATATCGTCCT

Downstream 100 bases:

>100_bases
CGATACAAGTCGAAGTACGATGCCAGCCTGCACCGGGCATGACGGAAGCAAGCTATGGGCGCATTCGCCGCAACCACCGG
CACTGACTGACGGTACAATA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcription Regulator Protein; Helix-Turn-Helix Domain Transcription Regulator Protein

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTTRPSSPPDDAQDALLAARVGTAIAEQRRARGLTQAKLAEMIDLEQEAVSRWERGTRVPTLHRLQQLSDALNCSVDQLL
QRGSKRPDDQLAMIADALDGLDSDERELVVNFVQQFADMLRAKHPAKKLGRK

Sequences:

>Translated_132_residues
MTTRPSSPPDDAQDALLAARVGTAIAEQRRARGLTQAKLAEMIDLEQEAVSRWERGTRVPTLHRLQQLSDALNCSVDQLL
QRGSKRPDDQLAMIADALDGLDSDERELVVNFVQQFADMLRAKHPAKKLGRK
>Mature_131_residues
TTRPSSPPDDAQDALLAARVGTAIAEQRRARGLTQAKLAEMIDLEQEAVSRWERGTRVPTLHRLQQLSDALNCSVDQLLQ
RGSKRPDDQLAMIADALDGLDSDERELVVNFVQQFADMLRAKHPAKKLGRK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14701; Mature: 14570

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRPSSPPDDAQDALLAARVGTAIAEQRRARGLTQAKLAEMIDLEQEAVSRWERGTRVP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
TLHRLQQLSDALNCSVDQLLQRGSKRPDDQLAMIADALDGLDSDERELVVNFVQQFADML
HHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RAKHPAKKLGRK
HCCCCHHHCCCC
>Mature Secondary Structure 
TTRPSSPPDDAQDALLAARVGTAIAEQRRARGLTQAKLAEMIDLEQEAVSRWERGTRVP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
TLHRLQQLSDALNCSVDQLLQRGSKRPDDQLAMIADALDGLDSDERELVVNFVQQFADML
HHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RAKHPAKKLGRK
HCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA