Click here to switch to the map view.

The map label for this gene is 116688950

Identifier: 116688950

GI number: 116688950

Start: 1034227

End: 1036467

Strand: Reverse

Name: 116688950

Synonym: Bcen2424_0927

Alternate gene names: NA

Gene position: 1036467-1034227 (Counterclockwise)

Preceding gene: 116688951

Following gene: 116688949

Centisome position: 29.75

GC content: 56.85

Gene sequence:

>2241_bases
ATGTATACCGATCCAATTAAAAAATATTCTGACCTTGCCACCAAGGGCTTCGCCTGTTTCCCGATTGTTCCGAACGAAAA
GCGCCCCCTCACGCCGAACGGATTCAAGGACGCGAGCCTCGACCCCGAACAGCATCGGGCATGGGCGGAGCAATTCCCCA
GCTCGAACATTGCCTATGCAACTGGCGCTCCGTCCGGTCGCCTGATCGTGATCGACGTCGATGTGAAGAACAACAAGTCT
GGCGCAAAGTCGCTTGTCGCACTTCAGAAAAAACACGGTCCGTTGCCTGCTACTCGCACCGTCATCACGCCATCTGGAGG
TATCCACCTGCTTTTCACTTACCCTGAAGGCATGAAGATTCAGTGTAAGGTCGGCTTCCGCGATGGCATCGACATCCGCG
CCGACGGGGGCTATTGCGGCGCTCCGCCATCAACCATCGAAGGCAACCCGTATGAGTGGGTCGATGAAACCGTACCTATT
GCGCCTGCTCCTGCATGGTTGCTCGAAGAATTCGCCAAGCAGGGTACGACACGCCGCAAGCGGAAATCGCGCAAGACCGC
AATCGTCCCTGCCGGCAATCGCAACCAGTCGGTCATGCTCCACGCGTTCTCGCTGCTTAACGGTGGTCTGGACTACGAGC
GGCTGGAGGAAGAACTGCTTGAATATAACGCGGCCTGCTGCAACCCGCCGCTCTCCGAGTCGGAGGTATCACAGGTCGCC
GTGAACGTTATCAGGTCGCATCAGGAGAACAGTGGCAGCAATCAGCACACGACCGATCTTGGCAATGCTCGGCGGATGAG
CGATCTGTTCGGCGACGAACTCCGTTACGTTCCTCAGACCAAGCAATGGCTGAAAAAACGGGAATCCGGTGTCTGGCAGC
GCGTCGATGAACTGCACGTACTCCTCCTCGCCCGCCAACTCCTTCCCCTGATCTACGAGGAGTTGTCTCGCCTGTCCCCG
GGAAACCGGGTGGAAATGTTCGAGCACGCGAAATATACCGAGAGCAATACGGGCCTGAAATATGCAGTGGAGCTCTTCAG
GTCGGAACCCGGCATTGCTGTTTCTGCGGGTGATCTCGATCAGGGTGAATGGATGCTCCCAGTACGCAATGGACTCATCG
ATTTGCGGACGGGCTCGTTCATGCCGATGGATCCGAAGCTGCACATTACCTATACAGCAGCAGTCGATTACGACCCGGAT
GCGACATGTCCGTTGTGGGAAGCATTCCTGCTTGAGATCATGAACCGGAACGTTGAGCTTGTGGAGTACGTGCGCCGCGC
TATCGGCTATACGCTGACGACACTGACGTCGGAACACGCCCTGTTCTTCGCATTCGGCAGTGGCGCAAACGGGAAATCGA
CCTTTCTGAACGTACTGCGCGCCCTGTTCGGTGATTTGGGCGCTCAGGCCAACGGCGACATGCTGCTCGACAAGAACGGT
GGGGCGGCTATGAGTTCAAACGCAGCGAGCAGCGAAGTCGCACGTCTCGCGGGAAAGCGTCTGGTCGCCATGAGTGAGGT
CGAAGAAGGACGCCACTTTAGCGAGAAAACCGTGAAGTGGTACACGGGCGGCGAAGACATCACCGCTCGCTTGCTTTACG
GGAATGCCTTCGAGTTCAAGCCTCGTTTCAAGCTCTGGCTCGCCGGTAACTACAAGCCGACGATCAAGGGCAACGATCAC
GGCATCTGGCGTCGCATGAAGCTGATCCCGTTCACAGTGACGATTCCGCCCGAGAAACGCGACCCCGACCTTGAGCGCAA
GCTGCGCGACGAACTCCCGGGTATCCTGAACTGGGCGCTCGTGGGCTGCAAGCAATGGCGCGAGAACGGCAACAAGCTCA
ATGAGCCGAAGGCCATCACGAACGAAGTGTCCGAGTACCGTGGCGAAATGGATGTAGTCGAAAGCTGGTTGTCAGAATTC
ACTCGCAATGATCCGGACGGGGAAATCCATTTCGGCGACACCTACAAGTTCTTCAAGGCGTGGAGCGAGTCGCAGTACAA
TTTTTCCTATTCCGGCAAGCGGTTCGGCATGATCCTGGCAGATAAGGGGTACAAGCCCGCATCGAAACCCCATCGGGTCT
ACAAGGGCCTGAGGCTGATCGTGGATCTGCAATTCAATGAGAACACGAAGGCCTACGTCGGACACGAATTCATCGACACG
GAGATCGAGAAGCGGAAGTTGGATTGGCAGAAAACTGTGCTTGCCGCCATGACCGACGACTCGGAGGTGGAACCCACGTA
A

Upstream 100 bases:

>100_bases
CCCGATCACCGGCGAATAACACCCGAAATCCGAGTTACCCCATGACAGGGATGATTGCACGGCCGCAATCTCCCTGTCAT
TAATTTCGCACTCCATAATT

Downstream 100 bases:

>100_bases
CTCTGAACGGATCGCGCTCTCGCGCGGTCCATTTTTTTGCATCTGGCATGGGCGGAAGCTGTTGTCATACCCCGGTCTCA
GCCCGGATGGTGTTGCTCAT

Product: P4 family phage/plasmid primase

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; Bifunctional DNA Primase/Polymerase; DNA Primase/Helicase; Primase; Phage DNA Polymerase; Phage Primase; Phage/Plasmid Primase; Phage-Associated Protein; Phage Associated DNA Primase; Prophage Lp4 DNA Replication; Phage/Plasmid DNA Primase; Phage-Like Protein; Nucleoside Triphosphatase D5 Family; N- Superfamily Bifunctional DNA Primase/Polymerase; Hyphotheical Protein; Phage/Plasmid Primase P4-Like; Bacteriophage-Related Protein; Phage Or Plasmid Primase P4-Like; D5 N-Terminal Domain Family Protein; Bifunctional Primase/DNA Polymerase Protein; Phage/Plasmid Primase P4 C-Terminal Protein; Phage-Related DNA Replication Protein; DNA-Polymerase Or DNA-Primase; Bacteriophage Related Protein; Phage Protein; DNA Primase Phage/Plasmid; Phage/Plasmid Primase P4-Like Protein; Prophage; DNA Primase; Plasmid/Phage Primase; Bacteriophage Protein; Primase P4-Like Protein; Bifunctional DNA Primase/Polymerase N-Terminal Family

Number of amino acids: Translated: 746; Mature: 746

Protein sequence:

>746_residues
MYTDPIKKYSDLATKGFACFPIVPNEKRPLTPNGFKDASLDPEQHRAWAEQFPSSNIAYATGAPSGRLIVIDVDVKNNKS
GAKSLVALQKKHGPLPATRTVITPSGGIHLLFTYPEGMKIQCKVGFRDGIDIRADGGYCGAPPSTIEGNPYEWVDETVPI
APAPAWLLEEFAKQGTTRRKRKSRKTAIVPAGNRNQSVMLHAFSLLNGGLDYERLEEELLEYNAACCNPPLSESEVSQVA
VNVIRSHQENSGSNQHTTDLGNARRMSDLFGDELRYVPQTKQWLKKRESGVWQRVDELHVLLLARQLLPLIYEELSRLSP
GNRVEMFEHAKYTESNTGLKYAVELFRSEPGIAVSAGDLDQGEWMLPVRNGLIDLRTGSFMPMDPKLHITYTAAVDYDPD
ATCPLWEAFLLEIMNRNVELVEYVRRAIGYTLTTLTSEHALFFAFGSGANGKSTFLNVLRALFGDLGAQANGDMLLDKNG
GAAMSSNAASSEVARLAGKRLVAMSEVEEGRHFSEKTVKWYTGGEDITARLLYGNAFEFKPRFKLWLAGNYKPTIKGNDH
GIWRRMKLIPFTVTIPPEKRDPDLERKLRDELPGILNWALVGCKQWRENGNKLNEPKAITNEVSEYRGEMDVVESWLSEF
TRNDPDGEIHFGDTYKFFKAWSESQYNFSYSGKRFGMILADKGYKPASKPHRVYKGLRLIVDLQFNENTKAYVGHEFIDT
EIEKRKLDWQKTVLAAMTDDSEVEPT

Sequences:

>Translated_746_residues
MYTDPIKKYSDLATKGFACFPIVPNEKRPLTPNGFKDASLDPEQHRAWAEQFPSSNIAYATGAPSGRLIVIDVDVKNNKS
GAKSLVALQKKHGPLPATRTVITPSGGIHLLFTYPEGMKIQCKVGFRDGIDIRADGGYCGAPPSTIEGNPYEWVDETVPI
APAPAWLLEEFAKQGTTRRKRKSRKTAIVPAGNRNQSVMLHAFSLLNGGLDYERLEEELLEYNAACCNPPLSESEVSQVA
VNVIRSHQENSGSNQHTTDLGNARRMSDLFGDELRYVPQTKQWLKKRESGVWQRVDELHVLLLARQLLPLIYEELSRLSP
GNRVEMFEHAKYTESNTGLKYAVELFRSEPGIAVSAGDLDQGEWMLPVRNGLIDLRTGSFMPMDPKLHITYTAAVDYDPD
ATCPLWEAFLLEIMNRNVELVEYVRRAIGYTLTTLTSEHALFFAFGSGANGKSTFLNVLRALFGDLGAQANGDMLLDKNG
GAAMSSNAASSEVARLAGKRLVAMSEVEEGRHFSEKTVKWYTGGEDITARLLYGNAFEFKPRFKLWLAGNYKPTIKGNDH
GIWRRMKLIPFTVTIPPEKRDPDLERKLRDELPGILNWALVGCKQWRENGNKLNEPKAITNEVSEYRGEMDVVESWLSEF
TRNDPDGEIHFGDTYKFFKAWSESQYNFSYSGKRFGMILADKGYKPASKPHRVYKGLRLIVDLQFNENTKAYVGHEFIDT
EIEKRKLDWQKTVLAAMTDDSEVEPT
>Mature_746_residues
MYTDPIKKYSDLATKGFACFPIVPNEKRPLTPNGFKDASLDPEQHRAWAEQFPSSNIAYATGAPSGRLIVIDVDVKNNKS
GAKSLVALQKKHGPLPATRTVITPSGGIHLLFTYPEGMKIQCKVGFRDGIDIRADGGYCGAPPSTIEGNPYEWVDETVPI
APAPAWLLEEFAKQGTTRRKRKSRKTAIVPAGNRNQSVMLHAFSLLNGGLDYERLEEELLEYNAACCNPPLSESEVSQVA
VNVIRSHQENSGSNQHTTDLGNARRMSDLFGDELRYVPQTKQWLKKRESGVWQRVDELHVLLLARQLLPLIYEELSRLSP
GNRVEMFEHAKYTESNTGLKYAVELFRSEPGIAVSAGDLDQGEWMLPVRNGLIDLRTGSFMPMDPKLHITYTAAVDYDPD
ATCPLWEAFLLEIMNRNVELVEYVRRAIGYTLTTLTSEHALFFAFGSGANGKSTFLNVLRALFGDLGAQANGDMLLDKNG
GAAMSSNAASSEVARLAGKRLVAMSEVEEGRHFSEKTVKWYTGGEDITARLLYGNAFEFKPRFKLWLAGNYKPTIKGNDH
GIWRRMKLIPFTVTIPPEKRDPDLERKLRDELPGILNWALVGCKQWRENGNKLNEPKAITNEVSEYRGEMDVVESWLSEF
TRNDPDGEIHFGDTYKFFKAWSESQYNFSYSGKRFGMILADKGYKPASKPHRVYKGLRLIVDLQFNENTKAYVGHEFIDT
EIEKRKLDWQKTVLAAMTDDSEVEPT

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83844; Mature: 83844

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTDPIKKYSDLATKGFACFPIVPNEKRPLTPNGFKDASLDPEQHRAWAEQFPSSNIAYA
CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE
TGAPSGRLIVIDVDVKNNKSGAKSLVALQKKHGPLPATRTVITPSGGIHLLFTYPEGMKI
ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCEE
QCKVGFRDGIDIRADGGYCGAPPSTIEGNPYEWVDETVPIAPAPAWLLEEFAKQGTTRRK
EEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHH
RKSRKTAIVPAGNRNQSVMLHAFSLLNGGLDYERLEEELLEYNAACCNPPLSESEVSQVA
HHCCCEEEEECCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VNVIRSHQENSGSNQHTTDLGNARRMSDLFGDELRYVPQTKQWLKKRESGVWQRVDELHV
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LLLARQLLPLIYEELSRLSPGNRVEMFEHAKYTESNTGLKYAVELFRSEPGIAVSAGDLD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCC
QGEWMLPVRNGLIDLRTGSFMPMDPKLHITYTAAVDYDPDATCPLWEAFLLEIMNRNVEL
CCCEEEEHHCCEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHH
VEYVRRAIGYTLTTLTSEHALFFAFGSGANGKSTFLNVLRALFGDLGAQANGDMLLDKNG
HHHHHHHHCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCC
GAAMSSNAASSEVARLAGKRLVAMSEVEEGRHFSEKTVKWYTGGEDITARLLYGNAFEFK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCEEEEC
PRFKLWLAGNYKPTIKGNDHGIWRRMKLIPFTVTIPPEKRDPDLERKLRDELPGILNWAL
CCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHH
VGCKQWRENGNKLNEPKAITNEVSEYRGEMDVVESWLSEFTRNDPDGEIHFGDTYKFFKA
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
WSESQYNFSYSGKRFGMILADKGYKPASKPHRVYKGLRLIVDLQFNENTKAYVGHEFIDT
HCCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHCCEEEEEEEEECCCCCEEECCHHHHH
EIEKRKLDWQKTVLAAMTDDSEVEPT
HHHHHHCCHHHHHHEEECCCCCCCCC
>Mature Secondary Structure
MYTDPIKKYSDLATKGFACFPIVPNEKRPLTPNGFKDASLDPEQHRAWAEQFPSSNIAYA
CCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE
TGAPSGRLIVIDVDVKNNKSGAKSLVALQKKHGPLPATRTVITPSGGIHLLFTYPEGMKI
ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCEE
QCKVGFRDGIDIRADGGYCGAPPSTIEGNPYEWVDETVPIAPAPAWLLEEFAKQGTTRRK
EEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHH
RKSRKTAIVPAGNRNQSVMLHAFSLLNGGLDYERLEEELLEYNAACCNPPLSESEVSQVA
HHCCCEEEEECCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VNVIRSHQENSGSNQHTTDLGNARRMSDLFGDELRYVPQTKQWLKKRESGVWQRVDELHV
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LLLARQLLPLIYEELSRLSPGNRVEMFEHAKYTESNTGLKYAVELFRSEPGIAVSAGDLD
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCC
QGEWMLPVRNGLIDLRTGSFMPMDPKLHITYTAAVDYDPDATCPLWEAFLLEIMNRNVEL
CCCEEEEHHCCEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHH
VEYVRRAIGYTLTTLTSEHALFFAFGSGANGKSTFLNVLRALFGDLGAQANGDMLLDKNG
HHHHHHHHCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCC
GAAMSSNAASSEVARLAGKRLVAMSEVEEGRHFSEKTVKWYTGGEDITARLLYGNAFEFK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCEEEEC
PRFKLWLAGNYKPTIKGNDHGIWRRMKLIPFTVTIPPEKRDPDLERKLRDELPGILNWAL
CCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHH
VGCKQWRENGNKLNEPKAITNEVSEYRGEMDVVESWLSEFTRNDPDGEIHFGDTYKFFKA
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
WSESQYNFSYSGKRFGMILADKGYKPASKPHRVYKGLRLIVDLQFNENTKAYVGHEFIDT
HCCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHCCEEEEEEEEECCCCCEEECCHHHHH
EIEKRKLDWQKTVLAAMTDDSEVEPT
HHHHHHCCHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA