| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688943
Identifier: 116688943
GI number: 116688943
Start: 1028847
End: 1029791
Strand: Reverse
Name: 116688943
Synonym: Bcen2424_0920
Alternate gene names: NA
Gene position: 1029791-1028847 (Counterclockwise)
Preceding gene: 116688944
Following gene: 116688941
Centisome position: 29.56
GC content: 49.21
Gene sequence:
>945_bases ATGGCAAAACGAGTCAGCATTATTAATTTCAAAGGTGGCGTTGGGAAAACGACGTTGTCATTTCAATTTGCCGCCGGTTT AGCCCGGTATCATCAAGCACGAGTTTTAATGGTGGACATGGACCACCAAAGCAGTCTCTCGATCGTCAGCTTGACGGCCC CGATATGGCAAAATTTGGTTGCGAGTAGTCGAACGGTCAATGAAATTTTTAAGCCATTCATCGGACAGAGCCCGACATTC CCGACTAGTTCGCTGATTGAACGTAGTGCCATAAAACAAGCCGGAATCGCTCGACATTATTCTACCCTCGATATCGTTCC AGCCAGTCTCCAATTGGACGATATCGAGATCGATCTAACAGCATCGCATCATGGTAATGCAATTCACTCCGAGTGGGATA AACGGACACTCGTGTGTCGCTGGTTAGAAGAGGCGGGAATCGACGAGACATATGATTACATTATCTTTGATTGCCCTCCT GCCACGAAACTTGTATCACAGAACGCCATTGCAGCAAGTCACGGATATATCATCCCGGTCATCCCAGAAGCTGTGATGGA GCGAGGTGCACCACACCTTAAATCTATGATTCAAAGTGGCATCGACACCAAGCTGAAAGCTCTTGCCACAATGGGAGCAC CTAGGTCTATGCACGTCCCTGATACCAAGCTTGCCGGTGTTGTGATCACGAGAATCAAGCCGCATGGCCCCGCTCACTCT GGATACACGGACGACCACACCCGGCACTTGGCCTCTCTCACGAGAGTATTCAACAATGATCTGCTTACGCCGTATATCCA TGACGGCACCGGCATCTCGCAGGCTCTTGATGATGGCGTACCAGTTTACGATAGACACTACACTCAAAATATCGGCAATC GTGGCCTCGACGTTATGTACAAAGACCTGACCGATGTACTGAAAACTCGTGTGGATGCCCTGTGA
Upstream 100 bases:
>100_bases CGGCAACACGATCTTGACGTGAGCAGCCTACCTACCAGCGAGAGAAGTTTTCCGCAACTGCCTGACCAGCAACGGAAACT ACAAAAAAACGGGGACATCA
Downstream 100 bases:
>100_bases ATAAACGCCGCAAGATTTCGATACGCAATCACAGCCGCGCTGGCAAGAAATTGTCCAATGCAGCCTTGGCCAATTATCTG GTCAGCCTTGCGGACGTGAA
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MAKRVSIINFKGGVGKTTLSFQFAAGLARYHQARVLMVDMDHQSSLSIVSLTAPIWQNLVASSRTVNEIFKPFIGQSPTF PTSSLIERSAIKQAGIARHYSTLDIVPASLQLDDIEIDLTASHHGNAIHSEWDKRTLVCRWLEEAGIDETYDYIIFDCPP ATKLVSQNAIAASHGYIIPVIPEAVMERGAPHLKSMIQSGIDTKLKALATMGAPRSMHVPDTKLAGVVITRIKPHGPAHS GYTDDHTRHLASLTRVFNNDLLTPYIHDGTGISQALDDGVPVYDRHYTQNIGNRGLDVMYKDLTDVLKTRVDAL
Sequences:
>Translated_314_residues MAKRVSIINFKGGVGKTTLSFQFAAGLARYHQARVLMVDMDHQSSLSIVSLTAPIWQNLVASSRTVNEIFKPFIGQSPTF PTSSLIERSAIKQAGIARHYSTLDIVPASLQLDDIEIDLTASHHGNAIHSEWDKRTLVCRWLEEAGIDETYDYIIFDCPP ATKLVSQNAIAASHGYIIPVIPEAVMERGAPHLKSMIQSGIDTKLKALATMGAPRSMHVPDTKLAGVVITRIKPHGPAHS GYTDDHTRHLASLTRVFNNDLLTPYIHDGTGISQALDDGVPVYDRHYTQNIGNRGLDVMYKDLTDVLKTRVDAL >Mature_313_residues AKRVSIINFKGGVGKTTLSFQFAAGLARYHQARVLMVDMDHQSSLSIVSLTAPIWQNLVASSRTVNEIFKPFIGQSPTFP TSSLIERSAIKQAGIARHYSTLDIVPASLQLDDIEIDLTASHHGNAIHSEWDKRTLVCRWLEEAGIDETYDYIIFDCPPA TKLVSQNAIAASHGYIIPVIPEAVMERGAPHLKSMIQSGIDTKLKALATMGAPRSMHVPDTKLAGVVITRIKPHGPAHSG YTDDHTRHLASLTRVFNNDLLTPYIHDGTGISQALDDGVPVYDRHYTQNIGNRGLDVMYKDLTDVLKTRVDAL
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR009061 - InterPro: IPR000551 - InterPro: IPR017818 [H]
Pfam domain/function: PF01656 CbiA; PF00376 MerR [H]
EC number: NA
Molecular weight: Translated: 34531; Mature: 34400
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRVSIINFKGGVGKTTLSFQFAAGLARYHQARVLMVDMDHQSSLSIVSLTAPIWQNLV CCCEEEEEEECCCCCCEEEEHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEHHHHHHHHH ASSRTVNEIFKPFIGQSPTFPTSSLIERSAIKQAGIARHYSTLDIVPASLQLDDIEIDLT HCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCEEEECEEEEEE ASHHGNAIHSEWDKRTLVCRWLEEAGIDETYDYIIFDCPPATKLVSQNAIAASHGYIIPV ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCEECCCCEEEEE IPEAVMERGAPHLKSMIQSGIDTKLKALATMGAPRSMHVPDTKLAGVVITRIKPHGPAHS CCHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHCCEEEEEECCCCCCCC GYTDDHTRHLASLTRVFNNDLLTPYIHDGTGISQALDDGVPVYDRHYTQNIGNRGLDVMY CCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHH KDLTDVLKTRVDAL HHHHHHHHHHHCCC >Mature Secondary Structure AKRVSIINFKGGVGKTTLSFQFAAGLARYHQARVLMVDMDHQSSLSIVSLTAPIWQNLV CCEEEEEEECCCCCCEEEEHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEHHHHHHHHH ASSRTVNEIFKPFIGQSPTFPTSSLIERSAIKQAGIARHYSTLDIVPASLQLDDIEIDLT HCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEECCEEEECEEEEEE ASHHGNAIHSEWDKRTLVCRWLEEAGIDETYDYIIFDCPPATKLVSQNAIAASHGYIIPV ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCEECCCCEEEEE IPEAVMERGAPHLKSMIQSGIDTKLKALATMGAPRSMHVPDTKLAGVVITRIKPHGPAHS CCHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHCCEEEEEECCCCCCCC GYTDDHTRHLASLTRVFNNDLLTPYIHDGTGISQALDDGVPVYDRHYTQNIGNRGLDVMY CCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCHHHHH KDLTDVLKTRVDAL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]