| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is gltJ [H]
Identifier: 116688693
GI number: 116688693
Start: 746284
End: 747024
Strand: Direct
Name: gltJ [H]
Synonym: Bcen2424_0670
Alternate gene names: 116688693
Gene position: 746284-747024 (Clockwise)
Preceding gene: 116688692
Following gene: 116688694
Centisome position: 21.42
GC content: 63.43
Gene sequence:
>741_bases ATGTCTTACCACTGGAACTGGGGCATCTTTCTGAGCCCCGTGTCGACCGGCGAGCCGACGACTTATTTCGGATGGCTGAT GTCCGGCTTCTGGGTGACGATCGAAGTGTCGCTCGTCGCCTGGGTCATCGCGCTGATCGTCGGGTCGCTGTTCGGCGTGC TGCGCACCGTGCCGAACAAGTGGCTCGCCGCGATCGGCACCGTGTACGTGTCGATCTTCCGGAACATCCCGCTGATCGTG CAGTTCTTCGTCTGGTATCTCGTGATACCCGAGTTGCTGCCTGCGTCGATCGGCACCTGGATCAAGCAGTTGCCGCCCGG CACGCAGTTCTTTACCGCGTCGATCGTCTGTCTCGGCCTGTTCACGGGCGCGCGCGTGTGCGAACAGGTGCGCTCGGGGA TCAACGCGCTGCCGAAGGGCCAGCGCGCGGCCGGCCTCGCGATGGGCTTCACGCAATGGCAGACGTATCGCTACGTACTG CTGCCCGTCGCGTACCGGATCATCGTGCCGCCGCTCACGTCGGAATTCCTGAACATCTTCAAGAACTCCGCCGTCGCATC GACGATCGGCCTGCTCGACCTGTCCGCACAGGCGCGCCAGCTCGTCGACTACACCGCGCAGACCTACGAGTCGTTCATCG CGGTCACGCTCGCCTACGTGCTGATCAACCTCGTCGTGATGGCGTTCATGCGCTGGATCGAAGGCCGCACGCGGCTGCCC GGCTATATCGGAGGCAAGTGA
Upstream 100 bases:
>100_bases CAAGGCGCTCGACTGACCACACGGCCGTTGATGCAGAAATGACGCTAATGAGACGGAAGAGGCCACGCTTCTTCCGTTTC TTTTTGCTGGAGTCTTGCCC
Downstream 100 bases:
>100_bases TGCATCAGTTCGACTGGAGTAGTATTCCCGGCGCGCTGCCGACGCTGTGGTCGGGGGCGGTCGTCACGTTCAAGATCACG CTGATCGCGATCGTGATCGG
Product: polar amino acid ABC transporter, inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNIPLIV QFFVWYLVIPELLPASIGTWIKQLPPGTQFFTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVL LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTRLP GYIGGK
Sequences:
>Translated_246_residues MSYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNIPLIV QFFVWYLVIPELLPASIGTWIKQLPPGTQFFTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVL LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTRLP GYIGGK >Mature_245_residues SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNIPLIVQ FFVWYLVIPELLPASIGTWIKQLPPGTQFFTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLL PVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTRLPG YIGGK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=247, Percent_Identity=63.1578947368421, Blast_Score=323, Evalue=5e-90, Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=29.3023255813954, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1786873, Length=217, Percent_Identity=27.1889400921659, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=29.3023255813954, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI48994930, Length=127, Percent_Identity=36.2204724409449, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1788645, Length=224, Percent_Identity=28.125, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87082239, Length=175, Percent_Identity=28, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=26.4840182648402, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=23.7668161434978, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787086, Length=221, Percent_Identity=23.9819004524887, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27430; Mature: 27298
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNK CCEEECCCEEECCCCCCCCHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCHH WLAAIGTVYVSIFRNIPLIVQFFVWYLVIPELLPASIGTWIKQLPPGTQFFTASIVCLGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GYIGGK CCCCCC >Mature Secondary Structure SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNK CEEECCCEEECCCCCCCCHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCHH WLAAIGTVYVSIFRNIPLIVQFFVWYLVIPELLPASIGTWIKQLPPGTQFFTASIVCLGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GYIGGK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]