| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is gltI [H]
Identifier: 116688692
GI number: 116688692
Start: 745306
End: 746199
Strand: Direct
Name: gltI [H]
Synonym: Bcen2424_0669
Alternate gene names: 116688692
Gene position: 745306-746199 (Clockwise)
Preceding gene: 116688691
Following gene: 116688693
Centisome position: 21.39
GC content: 61.41
Gene sequence:
>894_bases ATGAAATACCACAAGGCAGTCCTGATGGCCGCAGCGCTGTGCGCGTTCGCAAGCGGCGCGTACGCTCAGGAGACTGGCAC GCTGAAGAAGATCAAGGACACGGGCGTGATCGCGCTGGGCCACCGCGAATCGTCGATTCCGTTCTCCTACTACGACCAGA ACCAGCAGGTGGTCGGCTATTCGCGCGAGTTCCAGCTGAAGATCGTGGACGCGGTGAAGAAGAAGCTGAACCTGCCGAAC CTGCAGGTGAAGAACATCCCCGTCACGTCGCAGAACCGCATTCCGCTGGTGCAGAACGGCACGGTCGACATCGAGTGCGG CTCGACGACCAACAACCTCGAACGTCAGCAGCAGGCCGCGTTCTCCGACACGATCTTCGTGATCGGCACGCGCCTGATGA CGAAGAAGGATTCGGGCGTCAAGGATTTCGCCGACCTGAAGGGCAAGACGGTCGTGACGACCGCCGGCACGACGTCGGAG CGTCTGCTGCGCAAGATGAACAACGACAAGCAGCTCGGCATGAACATCATCAGCGCGAAGGATCACGGCGATTCGTTCAA CACGCTGGAATCGGGCCGCGCGGTCGCGTTCATGATGGACGACGCGCTGCTCGCGGGCGAGCGCGCGAAGGCGAAGCAGC CGGGCGAGTGGGTGATCGTCGGCACGCCGCAATCGGAAGAGGCTTACGGCTGCATGATGCGCAAGGGTGACGCCGACTTC AAGAAGGTCGTCGACGACGCGATCTCGCAAGTCGAGAAGTCGGGCGAAGCCGCGAAGATCTACGCGAAGTGGTTCGAGAA CCCGATTCCGCCGAAGGGGCTGAACCTGAACTTCCCGCTGTCCGATTCGATGAAGAAGCTGTACGCGAACCCGAACGACA AGGCGCTCGACTGA
Upstream 100 bases:
>100_bases GGCTTCGCACAGGGCGATTCGTAGTGCGGTAAACAACCAGTACTTTCAAAAATATTACTTTGATACACTGGCGCGGGTTT TAGCCAAGGAGATGACCAAA
Downstream 100 bases:
>100_bases CCACACGGCCGTTGATGCAGAAATGACGCTAATGAGACGGAAGAGGCCACGCTTCTTCCGTTTCTTTTTGCTGGAGTCTT GCCCATGTCTTACCACTGGA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLKIVDAVKKKLNLPN LQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSE RLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF KKVVDDAISQVEKSGEAAKIYAKWFENPIPPKGLNLNFPLSDSMKKLYANPNDKALD
Sequences:
>Translated_297_residues MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLKIVDAVKKKLNLPN LQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSE RLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF KKVVDDAISQVEKSGEAAKIYAKWFENPIPPKGLNLNFPLSDSMKKLYANPNDKALD >Mature_297_residues MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGYSREFQLKIVDAVKKKLNLPN LQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAAFSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSE RLLRKMNNDKQLGMNIISAKDHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF KKVVDDAISQVEKSGEAAKIYAKWFENPIPPKGLNLNFPLSDSMKKLYANPNDKALD
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=271, Percent_Identity=71.2177121771218, Blast_Score=409, Evalue=1e-116, Organism=Escherichia coli, GI1788228, Length=260, Percent_Identity=26.1538461538462, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788649, Length=241, Percent_Identity=25.3112033195021, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1788648, Length=238, Percent_Identity=25.6302521008403, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787031, Length=268, Percent_Identity=27.2388059701493, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32623; Mature: 32623
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY CCHHHHHHHHHHHHHHHCCCCHHHCCCHHEECCCCEEEECCCCCCCCEEEECCCCEEEEC SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAA CCEEEEEHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHH FSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK HHCEEEEEEEEHEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHCCEEEECC DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF CCCCCCCHHHCCCEEEEEECCHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHEECCCCHH KKVVDDAISQVEKSGEAAKIYAKWFENPIPPKGLNLNFPLSDSMKKLYANPNDKALD HHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure MKYHKAVLMAAALCAFASGAYAQETGTLKKIKDTGVIALGHRESSIPFSYYDQNQQVVGY CCHHHHHHHHHHHHHHHCCCCHHHCCCHHEECCCCEEEECCCCCCCCEEEECCCCEEEEC SREFQLKIVDAVKKKLNLPNLQVKNIPVTSQNRIPLVQNGTVDIECGSTTNNLERQQQAA CCEEEEEHHHHHHHHCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHH FSDTIFVIGTRLMTKKDSGVKDFADLKGKTVVTTAGTTSERLLRKMNNDKQLGMNIISAK HHCEEEEEEEEHEECCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHCCEEEECC DHGDSFNTLESGRAVAFMMDDALLAGERAKAKQPGEWVIVGTPQSEEAYGCMMRKGDADF CCCCCCCHHHCCCEEEEEECCHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHEECCCCHH KKVVDDAISQVEKSGEAAKIYAKWFENPIPPKGLNLNFPLSDSMKKLYANPNDKALD HHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]