| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688547
Identifier: 116688547
GI number: 116688547
Start: 582370
End: 583569
Strand: Direct
Name: 116688547
Synonym: Bcen2424_0523
Alternate gene names: NA
Gene position: 582370-583569 (Clockwise)
Preceding gene: 116688546
Following gene: 116688549
Centisome position: 16.72
GC content: 69.33
Gene sequence:
>1200_bases ATGGGGACGGTGCACGAATCGGGCAATCGCGCGGTCGACGCGCGGCGCGTCGGCACGTATGCAGCCGCGGTACTCGCGCT GCAGATCGTCGTTCTGGCTGTCTGGGCGATGAGGTACTACGGCTGGCACGATCGCTCGTCCCCGATGGTCGGCTCGGACT TCGCGATTTTTTGGGCGGCGGCCCGTGTCGCGATCGAGCACGGCGCCGCGGCGATCTTCTCGCCCGGGTGGATGCAGCCG ATCGAAGCCGCCCTGCGGCCGTTCGACGACTTCGCTCCGTGGCCGTATCCGCCGACGTTCCTGCTCGTCATCCTCCCGTT CGGCCTCGTGCCGTTCGCCTTCGCGCTCGTGGTGTTCGCGACACTGCAGATCGCCTGTTATGCGGCGGTCGTCGCGCGTG TCGTGCGCCCGCTCGACACGCAGCTGCGCGTCGCGATTGCCGCATTTCCGGGGCTGCTCGGCGCGGCGCTCACGATGCAA AATTCCTTCATGACGGTCGCGGCGGCGGCCGCGGCGCTGCTCCTGCTCGAATCGAGCCCGGTTCTGGCGGGCGCATGCAT TGCGGTGCTGATCGTGAAGCCGCAATTCGGCGTGCTGTTCCCGTTGGCGCTCGTCTGCGGGCGCCACTGGAAGGCGTTGA TATCGGCCGGCGCGTTCAGCGCCGGCATCGTCGCGGTGTCGCTGGCGGCGTTTGGCGTGCGGGCGTGGGCCGCGTTTTTC GCGTTCATGCCGGCGTTCCACCACAACGTGGTCGAGTACGGCGACACGCTTCGGCGGGCCATGCCGTCGACGATCTCGCT CGCCCGGGCAGCCGGGCTGTCCGTCGGGCCAGCCTATGCCGTGCATGCGGTGGTCGGGGTACTGGCGGTCGCGGTGGTCA TCGACGTCTGGATTCGCCGCTCGCGCTTCGCGCTGCGCGCCGCCGCGCTGGCCGCCGGTACGCTGCTCGTGCAGCCTTAC TATGTGTACTACGACCTGCTCTGGCTGGTATTGCCGGTTGCATTCCTGCTGCTGGACGCGCGGAACGTCCCGTTGCGCCG AGCCGAGATCGTGATCGTCGTGCTGGCCTGGCTCGCGCCGGCGCAGGCCTTCATCGCGGTGATTAGCGGCACGGGTTGGC CGGTCGCGTCGGCGATGCTGGTCGCGCTGCTCGCGATGATCGTGCGCCGGAGTCGCGCGCCGGCGCCGGTGGCTGCGTAG
Upstream 100 bases:
>100_bases CGATCCTGGGCGACGCGCGCTGCTGCGTGCCGGCGGAACGTCGTCTGCCAAAACGATCGTCGCCTATACTCGACGAGAAG AAAAATCGCGGGGGTGGGCG
Downstream 100 bases:
>100_bases CGGTTGCCGGGTGAGCGGGTGAGCGCATGTTGCTGCAGTCGGTCGACCCGAGCGGAACGATGCCGGGCGCATGAAACAGA AAACCCCTTGCGGCGCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MGTVHESGNRAVDARRVGTYAAAVLALQIVVLAVWAMRYYGWHDRSSPMVGSDFAIFWAAARVAIEHGAAAIFSPGWMQP IEAALRPFDDFAPWPYPPTFLLVILPFGLVPFAFALVVFATLQIACYAAVVARVVRPLDTQLRVAIAAFPGLLGAALTMQ NSFMTVAAAAAALLLLESSPVLAGACIAVLIVKPQFGVLFPLALVCGRHWKALISAGAFSAGIVAVSLAAFGVRAWAAFF AFMPAFHHNVVEYGDTLRRAMPSTISLARAAGLSVGPAYAVHAVVGVLAVAVVIDVWIRRSRFALRAAALAAGTLLVQPY YVYYDLLWLVLPVAFLLLDARNVPLRRAEIVIVVLAWLAPAQAFIAVISGTGWPVASAMLVALLAMIVRRSRAPAPVAA
Sequences:
>Translated_399_residues MGTVHESGNRAVDARRVGTYAAAVLALQIVVLAVWAMRYYGWHDRSSPMVGSDFAIFWAAARVAIEHGAAAIFSPGWMQP IEAALRPFDDFAPWPYPPTFLLVILPFGLVPFAFALVVFATLQIACYAAVVARVVRPLDTQLRVAIAAFPGLLGAALTMQ NSFMTVAAAAAALLLLESSPVLAGACIAVLIVKPQFGVLFPLALVCGRHWKALISAGAFSAGIVAVSLAAFGVRAWAAFF AFMPAFHHNVVEYGDTLRRAMPSTISLARAAGLSVGPAYAVHAVVGVLAVAVVIDVWIRRSRFALRAAALAAGTLLVQPY YVYYDLLWLVLPVAFLLLDARNVPLRRAEIVIVVLAWLAPAQAFIAVISGTGWPVASAMLVALLAMIVRRSRAPAPVAA >Mature_398_residues GTVHESGNRAVDARRVGTYAAAVLALQIVVLAVWAMRYYGWHDRSSPMVGSDFAIFWAAARVAIEHGAAAIFSPGWMQPI EAALRPFDDFAPWPYPPTFLLVILPFGLVPFAFALVVFATLQIACYAAVVARVVRPLDTQLRVAIAAFPGLLGAALTMQN SFMTVAAAAAALLLLESSPVLAGACIAVLIVKPQFGVLFPLALVCGRHWKALISAGAFSAGIVAVSLAAFGVRAWAAFFA FMPAFHHNVVEYGDTLRRAMPSTISLARAAGLSVGPAYAVHAVVGVLAVAVVIDVWIRRSRFALRAAALAAGTLLVQPYY VYYDLLWLVLPVAFLLLDARNVPLRRAEIVIVVLAWLAPAQAFIAVISGTGWPVASAMLVALLAMIVRRSRAPAPVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42424; Mature: 42293
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVHESGNRAVDARRVGTYAAAVLALQIVVLAVWAMRYYGWHDRSSPMVGSDFAIFWAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH ARVAIEHGAAAIFSPGWMQPIEAALRPFDDFAPWPYPPTFLLVILPFGLVPFAFALVVFA HHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TLQIACYAAVVARVVRPLDTQLRVAIAAFPGLLGAALTMQNSFMTVAAAAAALLLLESSP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VLAGACIAVLIVKPQFGVLFPLALVCGRHWKALISAGAFSAGIVAVSLAAFGVRAWAAFF CHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AFMPAFHHNVVEYGDTLRRAMPSTISLARAAGLSVGPAYAVHAVVGVLAVAVVIDVWIRR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SRFALRAAALAAGTLLVQPYYVYYDLLWLVLPVAFLLLDARNVPLRRAEIVIVVLAWLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AQAFIAVISGTGWPVASAMLVALLAMIVRRSRAPAPVAA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GTVHESGNRAVDARRVGTYAAAVLALQIVVLAVWAMRYYGWHDRSSPMVGSDFAIFWAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH ARVAIEHGAAAIFSPGWMQPIEAALRPFDDFAPWPYPPTFLLVILPFGLVPFAFALVVFA HHHHHHHCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TLQIACYAAVVARVVRPLDTQLRVAIAAFPGLLGAALTMQNSFMTVAAAAAALLLLESSP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VLAGACIAVLIVKPQFGVLFPLALVCGRHWKALISAGAFSAGIVAVSLAAFGVRAWAAFF CHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH AFMPAFHHNVVEYGDTLRRAMPSTISLARAAGLSVGPAYAVHAVVGVLAVAVVIDVWIRR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SRFALRAAALAAGTLLVQPYYVYYDLLWLVLPVAFLLLDARNVPLRRAEIVIVVLAWLAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AQAFIAVISGTGWPVASAMLVALLAMIVRRSRAPAPVAA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA