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The map label for this gene is visC [H]

Identifier: 116688549

GI number: 116688549

Start: 585063

End: 586241

Strand: Direct

Name: visC [H]

Synonym: Bcen2424_0525

Alternate gene names: 116688549

Gene position: 585063-586241 (Clockwise)

Preceding gene: 116688547

Following gene: 116688550

Centisome position: 16.79

GC content: 71.42

Gene sequence:

>1179_bases
ATGCCCGCCATGACTGCCCACCACTCCTTCGACGTCGCCGTGGTCGGCGGCGGGCTCGTCGGCAAGACGGCCGCGCTCGC
GCTGACCCAGTCCGGCTACAAGACAGCCTTGCTCGCCCAGCCGGCCACGCCGCGCCCCGCCGATCTCGCGTTCGACACGC
GCGTCTACGCGCTGTCGTCCAGTTCGCAGGCGTTGCTCGAGCGGCTGCGGGTCTGGCAGGCGCTCGACCACGGCCGGCTC
GCGCCGGTCTACGACATGCGCGTGTATGGCGATGCGCATGCCGAACTGCATTTCTCCGCCTACCAGGCGTCCGTGCCGCA
GCTTGCATGGATCGCCGAATCCTCGCTGGTCGAGGCGTCGCTCGATGCCGCGCTGCGGTTTCAGCCGAACCTGACGTGGT
TCGACTCGCGTGCGCAGGGCTTCGACGTGCGCGACGACGCGGCCGTGCTGACGCTGTCGTCGGGCCAGGTGCTCGAAGCC
GATCTCGTCGTCGGCGCCGACGGCGCGCATTCGTGGGTGCGCTCCCAAATGGGGGCCAGGGTAGAGCGGCGCGACTACCG
GCAAACGGGCGTCGTCGCGAACTTCAAGGCATCGCTGCCGCACCGCGAGACCGCGTACCAGTGGTTCCACGAAGGCGAGA
TCGTCGCGCTGCTGCCGCTGCCGGACGGCCACGTGTCGCTCGTGTGGTCCGCGCACACCGCGCATGCCGACGCACTGCTC
GCCCTCGATCCGGCGCAGCTCGCGGCCGAGGTCGAGCGCGTGTCGCACGGCCAGGTCGGCACGCTCGAATGCGTGACTCC
GGCCGCCGGCTTCCCGCTGGCGCTGCAGACGGTCGACAAGCTGATCGCGCCGCGCGTCGCGCTGGTGGGCGATGCCGCGC
ACCTGATCCACCCGCTCGCGGGGCAGGGGATGAACCTCGGGCTGCGCGACGTCGCCGCGCTCGCCGACGCGATCGCGGGC
AAGGAAAGCTTCCGCAATCTCGGCGATACGGTGCTGCTGCGCCGCTACGAACGTTCGCGCCGCGAGGACATCCGCGCGCT
GATGGTCGCCACCGACGGCCTGCAGCGGCTGTTCGCGGTGCCGGGCTCGCTCGCGAAGGCGGTGCGCAATGCGGGCATGG
CGTTCGTCGGCGCGCAGCCGCTCGTGAAGCGCTGGCTCGTGTCGGCCGCGCTCGGCTGA

Upstream 100 bases:

>100_bases
AACGGCCGATGCGTCGGGCCGCCGCGCGGGCGCACCGGCCCGCGATTCTGCTGATTTCCCGCAAAGTCCGGCCGCGTAAG
GGTTTGGCCCCGCGGCTATA

Downstream 100 bases:

>100_bases
GCGAACCTTCCGCCGCCGCGCCGGTCGGAGTCGGTTCCGTTACGGCGTACACTGTGCCGTGCACTCCGATTGAGCTGAAG
GAAGATTTCAATGAAAAAAA

Product: ubiquinone biosynthesis hydroxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPAMTAHHSFDVAVVGGGLVGKTAALALTQSGYKTALLAQPATPRPADLAFDTRVYALSSSSQALLERLRVWQALDHGRL
APVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLVEASLDAALRFQPNLTWFDSRAQGFDVRDDAAVLTLSSGQVLEA
DLVVGADGAHSWVRSQMGARVERRDYRQTGVVANFKASLPHRETAYQWFHEGEIVALLPLPDGHVSLVWSAHTAHADALL
ALDPAQLAAEVERVSHGQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADAIAG
KESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAVPGSLAKAVRNAGMAFVGAQPLVKRWLVSAALG

Sequences:

>Translated_392_residues
MPAMTAHHSFDVAVVGGGLVGKTAALALTQSGYKTALLAQPATPRPADLAFDTRVYALSSSSQALLERLRVWQALDHGRL
APVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLVEASLDAALRFQPNLTWFDSRAQGFDVRDDAAVLTLSSGQVLEA
DLVVGADGAHSWVRSQMGARVERRDYRQTGVVANFKASLPHRETAYQWFHEGEIVALLPLPDGHVSLVWSAHTAHADALL
ALDPAQLAAEVERVSHGQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADAIAG
KESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAVPGSLAKAVRNAGMAFVGAQPLVKRWLVSAALG
>Mature_391_residues
PAMTAHHSFDVAVVGGGLVGKTAALALTQSGYKTALLAQPATPRPADLAFDTRVYALSSSSQALLERLRVWQALDHGRLA
PVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLVEASLDAALRFQPNLTWFDSRAQGFDVRDDAAVLTLSSGQVLEAD
LVVGADGAHSWVRSQMGARVERRDYRQTGVVANFKASLPHRETAYQWFHEGEIVALLPLPDGHVSLVWSAHTAHADALLA
LDPAQLAAEVERVSHGQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADAIAGK
ESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAVPGSLAKAVRNAGMAFVGAQPLVKRWLVSAALG

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=385, Percent_Identity=27.012987012987, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI32967307, Length=276, Percent_Identity=30.4347826086957, Blast_Score=113, Evalue=2e-25,
Organism=Escherichia coli, GI1789273, Length=390, Percent_Identity=33.0769230769231, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786883, Length=391, Percent_Identity=34.0153452685422, Blast_Score=175, Evalue=6e-45,
Organism=Escherichia coli, GI1789274, Length=370, Percent_Identity=31.6216216216216, Blast_Score=155, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI25146631, Length=443, Percent_Identity=29.3453724604966, Blast_Score=137, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6321694, Length=462, Percent_Identity=25.7575757575758, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI19920760, Length=439, Percent_Identity=30.0683371298405, Blast_Score=140, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42003; Mature: 41872

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMTAHHSFDVAVVGGGLVGKTAALALTQSGYKTALLAQPATPRPADLAFDTRVYALSS
CCCCCCCCCCEEEEECCCCHHHHHHEEEECCCCCEEEEECCCCCCCCCEEECCEEEEECC
SSQALLERLRVWQALDHGRLAPVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLVEAS
CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCCEEHHHHHHHHHHH
LDAALRFQPNLTWFDSRAQGFDVRDDAAVLTLSSGQVLEADLVVGADGAHSWVRSQMGAR
HCCEEEECCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCH
VERRDYRQTGVVANFKASLPHRETAYQWFHEGEIVALLPLPDGHVSLVWSAHTAHADALL
HHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCEEE
ALDPAQLAAEVERVSHGQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLA
EECHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHC
GQGMNLGLRDVAALADAIAGKESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAV
CCCCCCCHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGSLAKAVRNAGMAFVGAQPLVKRWLVSAALG
CHHHHHHHHHCCEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAMTAHHSFDVAVVGGGLVGKTAALALTQSGYKTALLAQPATPRPADLAFDTRVYALSS
CCCCCCCCCEEEEECCCCHHHHHHEEEECCCCCEEEEECCCCCCCCCEEECCEEEEECC
SSQALLERLRVWQALDHGRLAPVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLVEAS
CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEHHHCCCCCEEHHHHHHHHHHH
LDAALRFQPNLTWFDSRAQGFDVRDDAAVLTLSSGQVLEADLVVGADGAHSWVRSQMGAR
HCCEEEECCCCEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCH
VERRDYRQTGVVANFKASLPHRETAYQWFHEGEIVALLPLPDGHVSLVWSAHTAHADALL
HHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCEEE
ALDPAQLAAEVERVSHGQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLA
EECHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHC
GQGMNLGLRDVAALADAIAGKESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAV
CCCCCCCHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGSLAKAVRNAGMAFVGAQPLVKRWLVSAALG
CHHHHHHHHHCCEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]