Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688502

Identifier: 116688502

GI number: 116688502

Start: 533386

End: 534321

Strand: Direct

Name: 116688502

Synonym: Bcen2424_0478

Alternate gene names: NA

Gene position: 533386-534321 (Clockwise)

Preceding gene: 116688501

Following gene: 116688503

Centisome position: 15.31

GC content: 60.58

Gene sequence:

>936_bases
ATGAAGAGAGTGCTTATGCCTGATTTCATGCAATACGCTGCACCGAAATTCCACGCGATCGTTCCAGACCGTCACGGCGC
ACGCGCAGCTCGCGGACGGTTCCTCGCCGCGTTGCGCGTCGCCGCCGCAGGCTTGCTGTTCGTGTCGATGGCGGCGTGCA
GCAAGTCCGATCCGACCTACACCAGCATTTCAACGGAGGCGCTGAACTACCTGCCATACAACCTCGTTCGGTTCACGATT
ACCGACCAGTTCGGCAACAAGGCACGCGGTGGTGGCGACCTGGAACCCGGGGCCGGGGAAGGCAGCATCGCCTGCTGTTA
CTTGCTGAAGGGCAACGATTTCAAGGTTCAGTGGACGTATTACGATGCGGACGACTGGCGGCCGGGTGAGCAGGTGAAGA
AACAGCAAGCGGAGGCGAACGTTTCGTTGCCGCCAACCAAGGAGCCGGATTCGATCGGCTCGCGCATTCTCGAGGTCCAC
TTCTACCCCGATCATCATGTCGAACTGGTATTTCCTGGCGAGATGCTGGGCAGTACCAGATTGCCGATCGTGGACGTGTC
GCGTGACTTGACGAAACAGTACGGCAAGCGGCTCGACAAGAAGTACGAGGACAATGACGCTCAGTCGCACCGCAGGATTT
CGAGAACCGTTGCGGAAGCCTGGATCAAGTACCGCTTCACAGATCGCAGCGACCTCGAGCAATACGCCTATTACGCGCTT
CTGGTGAATCCTCGGTTCGACGCGCACCCGGCGGTGCAGAAGCTCATCCAGTCGAGCAAGGGGAAACCGGGCGCATTCGC
GAAGGCGGTCGCCGCCCTGTCACCGACCGTTGTGAAGGAGCTTGGGCAGAACCGATTCCAGGCGGTTGCGGTCCCGTCGA
TTCCGGCGGGCCTGGTGCCGCCGCCACGTGAGGAGAATAGCCATGGCCGGGGCTAA

Upstream 100 bases:

>100_bases
TCTGAGCGAATGCCGCAGAAACCGCTGTTCGACCCGACGAACGAAAATATCAAGCCGGTCGCCGTGCCGGCCGTTCCCGA
CGGCTTGCTGCCGCGGCTAT

Downstream 100 bases:

>100_bases
CGATCGAAACGCCATTCGACTCGATCCGGACGACGCTACGCCGCAGAGCGTGCGAATGGCAGTCGACAAGATGGCGACCG
CCAACTATCCAAAGGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTYTSISTEALNYLPYNLVRFTI
TDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTYYDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVH
FYPDHHVELVFPGEMLGSTRLPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL
LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVPPPREENSHGRG

Sequences:

>Translated_311_residues
MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTYTSISTEALNYLPYNLVRFTI
TDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTYYDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVH
FYPDHHVELVFPGEMLGSTRLPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL
LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVPPPREENSHGRG
>Mature_311_residues
MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTYTSISTEALNYLPYNLVRFTI
TDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTYYDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVH
FYPDHHVELVFPGEMLGSTRLPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL
LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVPPPREENSHGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34527; Mature: 34527

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTY
CCCCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TSISTEALNYLPYNLVRFTITDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTY
EEHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEE
YDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVHFYPDHHVELVFPGEMLGSTR
ECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEEECCCCCEEEEECHHHHCCCC
LPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL
CCEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEEEE
LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVP
EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCCCC
PPREENSHGRG
CCCCCCCCCCC
>Mature Secondary Structure
MKRVLMPDFMQYAAPKFHAIVPDRHGARAARGRFLAALRVAAAGLLFVSMAACSKSDPTY
CCCCCCHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TSISTEALNYLPYNLVRFTITDQFGNKARGGGDLEPGAGEGSIACCYLLKGNDFKVQWTY
EEHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEE
YDADDWRPGEQVKKQQAEANVSLPPTKEPDSIGSRILEVHFYPDHHVELVFPGEMLGSTR
ECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHCCEEEEEEECCCCCEEEEECHHHHCCCC
LPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRRISRTVAEAWIKYRFTDRSDLEQYAYYAL
CCEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHEEEEE
LVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAALSPTVVKELGQNRFQAVAVPSIPAGLVP
EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCCCC
PPREENSHGRG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA