Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688478

Identifier: 116688478

GI number: 116688478

Start: 499546

End: 501162

Strand: Direct

Name: 116688478

Synonym: Bcen2424_0454

Alternate gene names: NA

Gene position: 499546-501162 (Clockwise)

Preceding gene: 116688477

Following gene: 116688479

Centisome position: 14.34

GC content: 52.01

Gene sequence:

>1617_bases
ATGTGGGAACGCCTTACAATTAGCCGCCTTCTGTCTCGTGAAAGCTCACGCTCCATGACAATCTCCGAAATTCTTGCGAA
ACAACTCAAAGCGCACAGTTCTGGCCCGTTCCTGTTCGCCGGCTCGGGACTGTCTCGGAGGTACCTGGGCCTCGACGACT
GGGCGGGACTGTTGCGTCGATTCTGCAGCCATATCAAGACATACGAGTACTATCTATCTTCGGCGAACGGTGACCTTCCG
AGCGTCGCGGCGGCGATGGCGGAAGACTTTCACGAAGTCTGGTGGAATCACGACGATTACGCGGTGAGCCGAGAGAAGCA
TTCGAAGAAAATCACCGAGCGTACAGGGCCGCTCCGCGTCGAGATTTGTGACTATTTGAAGAGTGTTGGGCTTGCTGATC
TGAGCCAAAACCCATATGGAGATGAGCTTGCCGCGCTGAGCAGATTGAATGTCGACGGTATTATCACCACAAATTGGGAT
ACATTCCTGCAATCGTTGTTTCCCGACTACCGAGTATACGTGGGGCAGGGCGAGCTTCTTTTTTCGAATCCCCAGTCGAT
TGGCGAAATCTACAAAATTCATGGGTGCGTGAACACGCCGCGAAGTTTGGTGCTGACACAACAAGACTATCAGGGCTTCA
ACGAGCGAAATGCATACCTTGCAGCCAAGCTGATTACGATTTTTGTCGAGCATCCCGTGATTTTCATGGGCTACTCCCTG
AATGATGGAAATATTCTTTCTCTGCTGCGCGCAATCTGTGCTTGCATCGGTCAGGACAAGCTGCAACAGCTTAATAACAA
CCTGATTTTCGTGCAACGTGCAGGTGATGGTGATGAGGAGTCGGTGTCTCAGACCATCATCGCCCTAGAAACAGTTCAGA
TCCCCATTACGCTAGTTAAAGCAATCTCGTTCACCGGGATCTATGAAGCGATCGAATCGACGAAACGAAAGATTCCGGCG
CGAGTGCTCCGATACTGCAAGGAGCAGCTTTACGAATTGGTGAAGACAACCGAGCCACACGGTAAGTTGGTTGTTGTGGA
CGTAGATCAGGTTAATGGTCGGCAAGACATCGAGTTCGTAGTAGGCGTCGGCGTAGCGGCAGAGCGAGAGGAAGAAGAGC
GTCGCCGGCTTGGCGATGTTGGTTACAGAGGTATCACGCCGCTCGATTTGTTCCATGACCTTGTTTTTCGGGACAAGGGA
TACGATGCGCGCCGGGTATTGACAGAGGCCATGCCGCGTCTATCAAGAGGTTTAACGTATCTCCCGGTGTTTTTCCTGCT
GCATGCTGCTGGCATAACGTCAGCGGCGGAATACGCAGCCTCCGGGTTTGGCGTTGACAAATACGTTAACCTGACGCCAC
ACGCCTTCCAGCTAAAGAACCTTAAGAAAGGGTTTATGCGGAACTACCGCGAATTGACTGTGACAGAGATGATTCACCGC
AACCCTCCGGAGATTGTTGCTCAGTATCTGCCGTTTACGCAGTGGACCCGAGCCGATTACGGCGTTATACATGAATTCCT
TGTTGCCCACGCCGACCGTTTCAGTAACTCAAACTATTCGACGGCATTTCGTAAGCTTGCTTGTTTGTACGATCGGGCGG
CCTACGGCTGGGAATAG

Upstream 100 bases:

>100_bases
TTGCTCTCCCCAGGTGCTCGTAGGCCAGCGGAGGAACCGGCTCTGCGGGCCCCCAGACCCTATGCACCAGCGACTATCAT
GAGCGAAGGCCGCCGCAGAT

Downstream 100 bases:

>100_bases
TCGCTCGGTGCGACATTGAAACTTGGAGGGGGCCGCTGTGATTGCCGGCACTTTGGATACGAACTGGTTGCGGTTGCTTT
GCACCCTGCGGCTCTACTAC

Product: phage protein

Products: NA

Alternate protein names: Phage-Related Protein; Sir2-Domain-Containing Protein

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MWERLTISRLLSRESSRSMTISEILAKQLKAHSSGPFLFAGSGLSRRYLGLDDWAGLLRRFCSHIKTYEYYLSSANGDLP
SVAAAMAEDFHEVWWNHDDYAVSREKHSKKITERTGPLRVEICDYLKSVGLADLSQNPYGDELAALSRLNVDGIITTNWD
TFLQSLFPDYRVYVGQGELLFSNPQSIGEIYKIHGCVNTPRSLVLTQQDYQGFNERNAYLAAKLITIFVEHPVIFMGYSL
NDGNILSLLRAICACIGQDKLQQLNNNLIFVQRAGDGDEESVSQTIIALETVQIPITLVKAISFTGIYEAIESTKRKIPA
RVLRYCKEQLYELVKTTEPHGKLVVVDVDQVNGRQDIEFVVGVGVAAEREEEERRRLGDVGYRGITPLDLFHDLVFRDKG
YDARRVLTEAMPRLSRGLTYLPVFFLLHAAGITSAAEYAASGFGVDKYVNLTPHAFQLKNLKKGFMRNYRELTVTEMIHR
NPPEIVAQYLPFTQWTRADYGVIHEFLVAHADRFSNSNYSTAFRKLACLYDRAAYGWE

Sequences:

>Translated_538_residues
MWERLTISRLLSRESSRSMTISEILAKQLKAHSSGPFLFAGSGLSRRYLGLDDWAGLLRRFCSHIKTYEYYLSSANGDLP
SVAAAMAEDFHEVWWNHDDYAVSREKHSKKITERTGPLRVEICDYLKSVGLADLSQNPYGDELAALSRLNVDGIITTNWD
TFLQSLFPDYRVYVGQGELLFSNPQSIGEIYKIHGCVNTPRSLVLTQQDYQGFNERNAYLAAKLITIFVEHPVIFMGYSL
NDGNILSLLRAICACIGQDKLQQLNNNLIFVQRAGDGDEESVSQTIIALETVQIPITLVKAISFTGIYEAIESTKRKIPA
RVLRYCKEQLYELVKTTEPHGKLVVVDVDQVNGRQDIEFVVGVGVAAEREEEERRRLGDVGYRGITPLDLFHDLVFRDKG
YDARRVLTEAMPRLSRGLTYLPVFFLLHAAGITSAAEYAASGFGVDKYVNLTPHAFQLKNLKKGFMRNYRELTVTEMIHR
NPPEIVAQYLPFTQWTRADYGVIHEFLVAHADRFSNSNYSTAFRKLACLYDRAAYGWE
>Mature_538_residues
MWERLTISRLLSRESSRSMTISEILAKQLKAHSSGPFLFAGSGLSRRYLGLDDWAGLLRRFCSHIKTYEYYLSSANGDLP
SVAAAMAEDFHEVWWNHDDYAVSREKHSKKITERTGPLRVEICDYLKSVGLADLSQNPYGDELAALSRLNVDGIITTNWD
TFLQSLFPDYRVYVGQGELLFSNPQSIGEIYKIHGCVNTPRSLVLTQQDYQGFNERNAYLAAKLITIFVEHPVIFMGYSL
NDGNILSLLRAICACIGQDKLQQLNNNLIFVQRAGDGDEESVSQTIIALETVQIPITLVKAISFTGIYEAIESTKRKIPA
RVLRYCKEQLYELVKTTEPHGKLVVVDVDQVNGRQDIEFVVGVGVAAEREEEERRRLGDVGYRGITPLDLFHDLVFRDKG
YDARRVLTEAMPRLSRGLTYLPVFFLLHAAGITSAAEYAASGFGVDKYVNLTPHAFQLKNLKKGFMRNYRELTVTEMIHR
NPPEIVAQYLPFTQWTRADYGVIHEFLVAHADRFSNSNYSTAFRKLACLYDRAAYGWE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61022; Mature: 61022

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWERLTISRLLSRESSRSMTISEILAKQLKAHSSGPFLFAGSGLSRRYLGLDDWAGLLRR
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
FCSHIKTYEYYLSSANGDLPSVAAAMAEDFHEVWWNHDDYAVSREKHSKKITERTGPLRV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEH
EICDYLKSVGLADLSQNPYGDELAALSRLNVDGIITTNWDTFLQSLFPDYRVYVGQGELL
HHHHHHHHCCCHHCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHCCCCEEEECCCCEE
FSNPQSIGEIYKIHGCVNTPRSLVLTQQDYQGFNERNAYLAAKLITIFVEHPVIFMGYSL
ECCCHHHHHHHHHHCCCCCCHHEEEECHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEC
NDGNILSLLRAICACIGQDKLQQLNNNLIFVQRAGDGDEESVSQTIIALETVQIPITLVK
CCCHHHHHHHHHHHHHCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AISFTGIYEAIESTKRKIPARVLRYCKEQLYELVKTTEPHGKLVVVDVDQVNGRQDIEFV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEE
VGVGVAAEREEEERRRLGDVGYRGITPLDLFHDLVFRDKGYDARRVLTEAMPRLSRGLTY
EECCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
LPVFFLLHAAGITSAAEYAASGFGVDKYVNLTPHAFQLKNLKKGFMRNYRELTVTEMIHR
HHHHHHHHHHCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NPPEIVAQYLPFTQWTRADYGVIHEFLVAHADRFSNSNYSTAFRKLACLYDRAAYGWE
CCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWERLTISRLLSRESSRSMTISEILAKQLKAHSSGPFLFAGSGLSRRYLGLDDWAGLLRR
CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHH
FCSHIKTYEYYLSSANGDLPSVAAAMAEDFHEVWWNHDDYAVSREKHSKKITERTGPLRV
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEH
EICDYLKSVGLADLSQNPYGDELAALSRLNVDGIITTNWDTFLQSLFPDYRVYVGQGELL
HHHHHHHHCCCHHCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHCCCCEEEECCCCEE
FSNPQSIGEIYKIHGCVNTPRSLVLTQQDYQGFNERNAYLAAKLITIFVEHPVIFMGYSL
ECCCHHHHHHHHHHCCCCCCHHEEEECHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEC
NDGNILSLLRAICACIGQDKLQQLNNNLIFVQRAGDGDEESVSQTIIALETVQIPITLVK
CCCHHHHHHHHHHHHHCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AISFTGIYEAIESTKRKIPARVLRYCKEQLYELVKTTEPHGKLVVVDVDQVNGRQDIEFV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEE
VGVGVAAEREEEERRRLGDVGYRGITPLDLFHDLVFRDKGYDARRVLTEAMPRLSRGLTY
EECCCHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
LPVFFLLHAAGITSAAEYAASGFGVDKYVNLTPHAFQLKNLKKGFMRNYRELTVTEMIHR
HHHHHHHHHHCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NPPEIVAQYLPFTQWTRADYGVIHEFLVAHADRFSNSNYSTAFRKLACLYDRAAYGWE
CCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA