Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688477

Identifier: 116688477

GI number: 116688477

Start: 497867

End: 498466

Strand: Direct

Name: 116688477

Synonym: Bcen2424_0453

Alternate gene names: NA

Gene position: 497867-498466 (Clockwise)

Preceding gene: 116688476

Following gene: 116688478

Centisome position: 14.29

GC content: 59.0

Gene sequence:

>600_bases
GTGTTGGAAGCCACTTATGAGGACGAGCAGAGGAGCCGCCAAGCAATCACGTCGCTTGAAAGACTCCGCACAACGGTCGA
GGAGAAAGTCGGCACGCTGTCGCGCGACACGGTGAAGCTAATCGAAGGCTCGTCCGAAGCAACGGCGACACAGGCGGCGA
AACTGCTGCGAGAAAAATTCGTGGAGGCCGACGTGGCCGCCGAACACGCGCGTGCACGCTATGTCCGCGCCACACACAGC
TTGGGATGGCGACTCTTTGGCCTAGCTGTTTTGGTGCAGTTGCTGATTTTCGTCGGAGTATGGGTGATTGTCGCGCGAAC
ATTGCCGTCACAAGATGACATCGCCGCTCGGCGGCAGACGCTACAGGAGCTGGCGCAACAAATATCGGGCCAGCAAAGTC
AGGCGGCTGAGCTGGATCGGCAGATCAAGGCGAAGCAGCGCAAGGTGAACGACCTCGATCGACGGGGGGCTCGGGTCGAA
TGGACAACATGCAGTGATAGTGAGCAGGTCTCGCACCTCTGCTTTCGTACAGACGATCAAGCGGGAGATTTCACGAGCGG
CAATGGGGGGAAGACGTTCCGTGTTCCTTGGGGGTACTAG

Upstream 100 bases:

>100_bases
ACAAGTCCATCGAGGGACCCACACACGAGATACCACTGTGAAGCTGTCGCAAGGAACACACGAGCAAACCGTCGAGGCGC
TATTAGACGCAGCTGGCAAG

Downstream 100 bases:

>100_bases
CGGGGGACGTTCGTAGGGTTTCTGCTGACCGACGGGCGTGCCGGTGTTCCCGCGCCCGCCCGTGGACGGGTGCGCTATCC
ACACCGCAAGGGTGTGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MLEATYEDEQRSRQAITSLERLRTTVEEKVGTLSRDTVKLIEGSSEATATQAAKLLREKFVEADVAAEHARARYVRATHS
LGWRLFGLAVLVQLLIFVGVWVIVARTLPSQDDIAARRQTLQELAQQISGQQSQAAELDRQIKAKQRKVNDLDRRGARVE
WTTCSDSEQVSHLCFRTDDQAGDFTSGNGGKTFRVPWGY

Sequences:

>Translated_199_residues
MLEATYEDEQRSRQAITSLERLRTTVEEKVGTLSRDTVKLIEGSSEATATQAAKLLREKFVEADVAAEHARARYVRATHS
LGWRLFGLAVLVQLLIFVGVWVIVARTLPSQDDIAARRQTLQELAQQISGQQSQAAELDRQIKAKQRKVNDLDRRGARVE
WTTCSDSEQVSHLCFRTDDQAGDFTSGNGGKTFRVPWGY
>Mature_199_residues
MLEATYEDEQRSRQAITSLERLRTTVEEKVGTLSRDTVKLIEGSSEATATQAAKLLREKFVEADVAAEHARARYVRATHS
LGWRLFGLAVLVQLLIFVGVWVIVARTLPSQDDIAARRQTLQELAQQISGQQSQAAELDRQIKAKQRKVNDLDRRGARVE
WTTCSDSEQVSHLCFRTDDQAGDFTSGNGGKTFRVPWGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22350; Mature: 22350

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEATYEDEQRSRQAITSLERLRTTVEEKVGTLSRDTVKLIEGSSEATATQAAKLLREKF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
VEADVAAEHARARYVRATHSLGWRLFGLAVLVQLLIFVGVWVIVARTLPSQDDIAARRQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LQELAQQISGQQSQAAELDRQIKAKQRKVNDLDRRGARVEWTTCSDSEQVSHLCFRTDDQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCC
AGDFTSGNGGKTFRVPWGY
CCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MLEATYEDEQRSRQAITSLERLRTTVEEKVGTLSRDTVKLIEGSSEATATQAAKLLREKF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
VEADVAAEHARARYVRATHSLGWRLFGLAVLVQLLIFVGVWVIVARTLPSQDDIAARRQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LQELAQQISGQQSQAAELDRQIKAKQRKVNDLDRRGARVEWTTCSDSEQVSHLCFRTDDQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCC
AGDFTSGNGGKTFRVPWGY
CCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA