| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688476
Identifier: 116688476
GI number: 116688476
Start: 497082
End: 497807
Strand: Direct
Name: 116688476
Synonym: Bcen2424_0452
Alternate gene names: NA
Gene position: 497082-497807 (Clockwise)
Preceding gene: 116688474
Following gene: 116688477
Centisome position: 14.27
GC content: 59.37
Gene sequence:
>726_bases ATGAAGCTCTACGAAAATATCGTCATCGGGAATTTCCTCTACGCGCTCGGATTCGCAGTTCGCGCCCGCCGCCCTTCGGG CGTAACGGCCAGCGCTGTCAATTTGTTGCAGCAGACACCCGCCGATACGCTATTGGGCGATTTGCTATTGGAATTTCCTG GTGTTGTCCGCTTGATCGAATTCAAGGCCGAGGACAATCGCGAATCGAAGGAACTGAGCCGGCACCGGAAGTTGGCTGCT GGCATGTCTGGAAATGCCGAGCTGCAAGCGGTCTCTCGTGATGTGCACTGGTACGTTGAAACCGCGCCGTCCACCGAACA CGGTGTCGTTGCGCGCGTCGTGCCATATTTGGATGCCTTTCCGCGGGAGAGAGCTAAGCGTGATCGGCTAGAGACGTTTA TCGAACGATTGGCCCGGGAGGTGGCGGAGGAGCGCCCCCGTGTGCGAGCGGATCGTGAAGCCGCCTACTTGCGTTGGGTG AAGCAAACGCAAGGGGACGGCATGGTGGGATCAGGAGGTCTCATCTTGGTTGCTGATGCAAACGGCGCGCTGCGCTACGC CCAGTTGCTCGATATGCTCGAGATGAGGCTCAGCCATCGCCAATGGGTCGAACTGCATCATCAGCGGAGGGAGCGCGAGC TCGCTCTGGAACGCGAGCTTGGGCGCCGCCTAGAGCGACGGCACGACAAGTCCATCGAGGGACCCACACACGAGATACCA CTGTGA
Upstream 100 bases:
>100_bases GCTTGTCGACAGAAACAGTAATCGATGTCATCTTGTCATCGGGCGAAAGCGCTGGCATGGTTGCGCTGCGGGACCCTTCA AGTAGCAGCGTGCAAAACCA
Downstream 100 bases:
>100_bases AGCTGTCGCAAGGAACACACGAGCAAACCGTCGAGGCGCTATTAGACGCAGCTGGCAAGGTGTTGGAAGCCACTTATGAG GACGAGCAGAGGAGCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKLYENIVIGNFLYALGFAVRARRPSGVTASAVNLLQQTPADTLLGDLLLEFPGVVRLIEFKAEDNRESKELSRHRKLAA GMSGNAELQAVSRDVHWYVETAPSTEHGVVARVVPYLDAFPRERAKRDRLETFIERLAREVAEERPRVRADREAAYLRWV KQTQGDGMVGSGGLILVADANGALRYAQLLDMLEMRLSHRQWVELHHQRRERELALERELGRRLERRHDKSIEGPTHEIP L
Sequences:
>Translated_241_residues MKLYENIVIGNFLYALGFAVRARRPSGVTASAVNLLQQTPADTLLGDLLLEFPGVVRLIEFKAEDNRESKELSRHRKLAA GMSGNAELQAVSRDVHWYVETAPSTEHGVVARVVPYLDAFPRERAKRDRLETFIERLAREVAEERPRVRADREAAYLRWV KQTQGDGMVGSGGLILVADANGALRYAQLLDMLEMRLSHRQWVELHHQRRERELALERELGRRLERRHDKSIEGPTHEIP L >Mature_241_residues MKLYENIVIGNFLYALGFAVRARRPSGVTASAVNLLQQTPADTLLGDLLLEFPGVVRLIEFKAEDNRESKELSRHRKLAA GMSGNAELQAVSRDVHWYVETAPSTEHGVVARVVPYLDAFPRERAKRDRLETFIERLAREVAEERPRVRADREAAYLRWV KQTQGDGMVGSGGLILVADANGALRYAQLLDMLEMRLSHRQWVELHHQRRERELALERELGRRLERRHDKSIEGPTHEIP L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27562; Mature: 27562
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYENIVIGNFLYALGFAVRARRPSGVTASAVNLLQQTPADTLLGDLLLEFPGVVRLIE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHH FKAEDNRESKELSRHRKLAAGMSGNAELQAVSRDVHWYVETAPSTEHGVVARVVPYLDAF CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHH PRERAKRDRLETFIERLAREVAEERPRVRADREAAYLRWVKQTQGDGMVGSGGLILVADA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCEEEEECC NGALRYAQLLDMLEMRLSHRQWVELHHQRRERELALERELGRRLERRHDKSIEGPTHEIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC L C >Mature Secondary Structure MKLYENIVIGNFLYALGFAVRARRPSGVTASAVNLLQQTPADTLLGDLLLEFPGVVRLIE CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHH FKAEDNRESKELSRHRKLAAGMSGNAELQAVSRDVHWYVETAPSTEHGVVARVVPYLDAF CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHH PRERAKRDRLETFIERLAREVAEERPRVRADREAAYLRWVKQTQGDGMVGSGGLILVADA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCEEEEECC NGALRYAQLLDMLEMRLSHRQWVELHHQRRERELALERELGRRLERRHDKSIEGPTHEIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA