| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688474
Identifier: 116688474
GI number: 116688474
Start: 495319
End: 495774
Strand: Direct
Name: 116688474
Synonym: Bcen2424_0450
Alternate gene names: NA
Gene position: 495319-495774 (Clockwise)
Preceding gene: 116688473
Following gene: 116688476
Centisome position: 14.22
GC content: 55.04
Gene sequence:
>456_bases ATGATCGAGGTATCGAATGACGCACTTCGAACGATTGTGGTTACAGGCATGGCTGTTGTGGGCGCGACGGTAATTTTTAG ATTCGTGGTCCCCTTCATCGGGAGCAGGTTGCGCGGAGAAACCATCGCCGACCACGTCACTCGGGTCGAAAGCGAGCAAC GAGAGAAGCGGTTGTTCCAGTCCAATCTGAACACGTCGCCGCGAGAAGCATTATCGATAAGGGTGGTGAATATGGCGATC GCTCTCACGGTGATGTGGCTGCTGTCGCGCTTCCCAACAAGCTATCTTGTCGTGTACTTCGTCCTGTACGTCGCCGTTGG AATGGGCTTTTGCTGGTGGGCGAAGGTGATTCCGGACGAGAAATTCCACTGCCTGAACTGGAATAGCCGGCTCCAGCTGC GCCTCTTCTACGTCTGGCTGTGGCCGATAAACGTCGTCCGATCGCTTATGCGTTGA
Upstream 100 bases:
>100_bases CGAATTCCGGGACCGGCAGCGCCGGGGGCAACTCGTCTAGTGGAGGCGGATACAGCTACGCCCAAGGATCGCAAGGCTCA CAAAACAGGGGGACGTAACG
Downstream 100 bases:
>100_bases CTGCACAACGCCGCTTCCGGGCGGCGATTAGTCTCTGATCGCGCGGTAGCGCAAGCTGTCTTCGACGTCCAATACTCTTC GCTCTGTCGTTCGTTCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MIEVSNDALRTIVVTGMAVVGATVIFRFVVPFIGSRLRGETIADHVTRVESEQREKRLFQSNLNTSPREALSIRVVNMAI ALTVMWLLSRFPTSYLVVYFVLYVAVGMGFCWWAKVIPDEKFHCLNWNSRLQLRLFYVWLWPINVVRSLMR
Sequences:
>Translated_151_residues MIEVSNDALRTIVVTGMAVVGATVIFRFVVPFIGSRLRGETIADHVTRVESEQREKRLFQSNLNTSPREALSIRVVNMAI ALTVMWLLSRFPTSYLVVYFVLYVAVGMGFCWWAKVIPDEKFHCLNWNSRLQLRLFYVWLWPINVVRSLMR >Mature_151_residues MIEVSNDALRTIVVTGMAVVGATVIFRFVVPFIGSRLRGETIADHVTRVESEQREKRLFQSNLNTSPREALSIRVVNMAI ALTVMWLLSRFPTSYLVVYFVLYVAVGMGFCWWAKVIPDEKFHCLNWNSRLQLRLFYVWLWPINVVRSLMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17541; Mature: 17541
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVSNDALRTIVVTGMAVVGATVIFRFVVPFIGSRLRGETIADHVTRVESEQREKRLFQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SNLNTSPREALSIRVVNMAIALTVMWLLSRFPTSYLVVYFVLYVAVGMGFCWWAKVIPDE HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC KFHCLNWNSRLQLRLFYVWLWPINVVRSLMR CEEEECCCCCEEHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIEVSNDALRTIVVTGMAVVGATVIFRFVVPFIGSRLRGETIADHVTRVESEQREKRLFQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SNLNTSPREALSIRVVNMAIALTVMWLLSRFPTSYLVVYFVLYVAVGMGFCWWAKVIPDE HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC KFHCLNWNSRLQLRLFYVWLWPINVVRSLMR CEEEECCCCCEEHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA