| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hisC [H]
Identifier: 116688450
GI number: 116688450
Start: 476347
End: 477420
Strand: Direct
Name: hisC [H]
Synonym: Bcen2424_0426
Alternate gene names: 116688450
Gene position: 476347-477420 (Clockwise)
Preceding gene: 116688449
Following gene: 116688451
Centisome position: 13.67
GC content: 69.18
Gene sequence:
>1074_bases ATGACGACGCCACAAGACATCATCCGCCGCGACGTGCTCGCGATGACCAGCTATCCGGTGCCGGACGCGAGCGGGTTCGT GAAGCTCGACGCGATGGAGAACCCGTACCCGCTGCCGGCGCCGCTCGCCGCGGCGCTCGGCGAGCGGCTCGCGCAGGTCG CGCTGAACCGCTACCCGGCGCCGCGCCCGGCCGCGCTGCTCGACAAGCTGCGCCACGCGATGCGCGTGCCGGCCGGCTGC GACGTGCTGCTCGGCAACGGTTCCGACGAAATCATCAGCATGATCTCGGTCGCGTGCGCGCAGCCGGGCGCGAAGGTGCT CGCACCGGTGCCGGGCTTCGTGATGTACGAACTCTCGGCGAAGTTCGCGCAGCTCGAATTCGTCGGCGTGCCGCTGAAGG CGGACCTGACGCTCGACGTCGACGCGATGCTCGCGGCGATCGCCGAGCACCGGCCGGCGATCGTCTATCTCGCGTACCCG AACAACCCGACCGGCACGCTGTACGACGATGCCGACGTCGAGCGGATCGTCGCGGCCGCGCGGCACAGCCTGATCGTGAT CGACGAGGCGTACCAGCCGTTCGCCGAGCGTTCGTGGCTGCCGCGCGCCGCCGAGTTCGACAACGTCGTCGTGATGCGCA CGGTGTCGAAGCTCGGCCTCGCGGGCATCCGCCTCGGCTACCTCGTCGGCTTGCCGGCGTGGCTGAACGAATTCGACAAG GTGCGCCCGCCGTACAACATCAACGTGCTGACCCAGGCGACCGCCGATTTCCTGCTCGATCACCTCGACGTGCTCGACGC GCAGGCGGCCGAATTGCGCGCGGAACGCACCCGCCTCGCGCAGGCGGTGGCCGCGCTGCCGGGCGCGACGGTGTTCCCGA GCGCCGGCAATTTCCTGCTGGTGCGCGTGCCGGACGCGGCAGCCGTGTTCGACGCGCTGCTCACCGAGCGGGTGCTGGTC AAAAACGTGAGTAAAATGCATCCATTACTGGCCGAATGCGTGCGGCTGACCGTCGGTTCTCCCGACGAAAACGCCCGCCT GCTGGCCGCCTTGAAACTCGCGCTGCCCGGTTGA
Upstream 100 bases:
>100_bases ACCGGCGGCACCCGGAGCGGGGCAGGAGACGAGCGCAGGGCGGCAGCCGCCGCCTTGCCGACCCATTTGACGCCGGCGCG ACGCACGCCGGCTTGAGACC
Downstream 100 bases:
>100_bases GCCCAGGGCGCGGCGGCGCGCGACGATCAATCCCCATTTACATCAGACTCAATCAAGGAATTGCCATGCGTGTGGCGGAA GTCGTTCGCAATACCAGCGA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYPLPAPLAAALGERLAQVALNRYPAPRPAALLDKLRHAMRVPAGC DVLLGNGSDEIISMISVACAQPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLKADLTLDVDAMLAAIAEHRPAIVYLAYP NNPTGTLYDDADVERIVAAARHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLVGLPAWLNEFDK VRPPYNINVLTQATADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLLVRVPDAAAVFDALLTERVLV KNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG
Sequences:
>Translated_357_residues MTTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYPLPAPLAAALGERLAQVALNRYPAPRPAALLDKLRHAMRVPAGC DVLLGNGSDEIISMISVACAQPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLKADLTLDVDAMLAAIAEHRPAIVYLAYP NNPTGTLYDDADVERIVAAARHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLVGLPAWLNEFDK VRPPYNINVLTQATADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLLVRVPDAAAVFDALLTERVLV KNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG >Mature_356_residues TTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYPLPAPLAAALGERLAQVALNRYPAPRPAALLDKLRHAMRVPAGCD VLLGNGSDEIISMISVACAQPGAKVLAPVPGFVMYELSAKFAQLEFVGVPLKADLTLDVDAMLAAIAEHRPAIVYLAYPN NPTGTLYDDADVERIVAAARHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLVGLPAWLNEFDKV RPPYNINVLTQATADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLLVRVPDAAAVFDALLTERVLVK NVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=367, Percent_Identity=31.0626702997275, Blast_Score=133, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6322075, Length=365, Percent_Identity=28.4931506849315, Blast_Score=121, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 38396; Mature: 38265
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYPLPAPLAAALGERLAQVALNRYPA CCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PRPAALLDKLRHAMRVPAGCDVLLGNGSDEIISMISVACAQPGAKVLAPVPGFVMYELSA CCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEHHHH KFAQLEFVGVPLKADLTLDVDAMLAAIAEHRPAIVYLAYPNNPTGTLYDDADVERIVAAA HHEEEEEEECCEECCCEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH RHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLVGLPAWLNEFDK HCCEEEEECHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VRPPYNINVLTQATADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLL CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEE VRVPDAAAVFDALLTERVLVKNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TTPQDIIRRDVLAMTSYPVPDASGFVKLDAMENPYPLPAPLAAALGERLAQVALNRYPA CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PRPAALLDKLRHAMRVPAGCDVLLGNGSDEIISMISVACAQPGAKVLAPVPGFVMYELSA CCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCEEEHHHH KFAQLEFVGVPLKADLTLDVDAMLAAIAEHRPAIVYLAYPNNPTGTLYDDADVERIVAAA HHEEEEEEECCEECCCEECHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH RHSLIVIDEAYQPFAERSWLPRAAEFDNVVVMRTVSKLGLAGIRLGYLVGLPAWLNEFDK HCCEEEEECHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VRPPYNINVLTQATADFLLDHLDVLDAQAAELRAERTRLAQAVAALPGATVFPSAGNFLL CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEE VRVPDAAAVFDALLTERVLVKNVSKMHPLLAECVRLTVGSPDENARLLAALKLALPG EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12754231 [H]