| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hisB [H]
Identifier: 116688451
GI number: 116688451
Start: 477486
End: 478073
Strand: Direct
Name: hisB [H]
Synonym: Bcen2424_0427
Alternate gene names: 116688451
Gene position: 477486-478073 (Clockwise)
Preceding gene: 116688450
Following gene: 116688452
Centisome position: 13.71
GC content: 65.65
Gene sequence:
>588_bases ATGCGTGTGGCGGAAGTCGTTCGCAATACCAGCGAAACGCAGATCCGTGTGAAGCTCGATCTCGACGGCACCGGCCGGCA GAAGCTGGCCACCGGCGTGCCGTTTCTCGACCATATGCTCGACCAGATCGCGCGACACGGTCTGGTCGATCTCGAGGTCG AAGCGCATGGCGACACGCATATCGACGATCACCACACGGTCGAGGATGTCGGCATCACGCTCGGTCAGGCCGTCGCGAAG GCGATCGGCGACCGCAAGGGCATCCGCCGCTACGGCCATTCGTACGTGCCGCTCGACGAGGCGCTGTCGCGCGTCGTGAT CGATTTCTCCGGCCGGCCGGGCCTCGAATTCCACGTGCCGTTCACGCGCGCGCGGATCGGCACGTTCGACGTCGACCTGT CGATCGAATTCTTCCGCGGGTTCGTGAACCACGCGGGCGTCACGCTGCACATCGACAACCTGCGCGGAATCAACGCGCAC CATCAGCTCGAGACGGTGTTCAAGGCCTTCGGCCGGGCGCTGCGCGCGGCGGTGGAGCTCGACGAGCGGGCGGCGGGGCA GATTCCGTCGACGAAAGGCAGCCTCTAA
Upstream 100 bases:
>100_bases TGCTGGCCGCCTTGAAACTCGCGCTGCCCGGTTGAGCCCAGGGCGCGGCGGCGCGCGACGATCAATCCCCATTTACATCA GACTCAATCAAGGAATTGCC
Downstream 100 bases:
>100_bases CTTCCGAACGGACGACGCCAAGGACGACCTCACGGCTTCGGCGCGGCGCGCCGGCGTGCGATGGATCTGCTCAAATCGTT CATTTCGCTGCTCGCGCTGA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTHIDDHHTVEDVGITLGQAVAK AIGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAH HQLETVFKAFGRALRAAVELDERAAGQIPSTKGSL
Sequences:
>Translated_195_residues MRVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTHIDDHHTVEDVGITLGQAVAK AIGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAH HQLETVFKAFGRALRAAVELDERAAGQIPSTKGSL >Mature_195_residues MRVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTHIDDHHTVEDVGITLGQAVAK AIGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAH HQLETVFKAFGRALRAAVELDERAAGQIPSTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=49.4845360824742, Blast_Score=186, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=216, Percent_Identity=39.3518518518519, Blast_Score=150, Evalue=9e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21515; Mature: 21515
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTH CCHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCC IDDHHTVEDVGITLGQAVAKAIGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVP CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHEEEECCCCCCCEEECC FTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAFGRALRAAVEL HHHHCCCEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH DERAAGQIPSTKGSL HHHHCCCCCCCCCCC >Mature Secondary Structure MRVAEVVRNTSETQIRVKLDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLEVEAHGDTH CCHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCC IDDHHTVEDVGITLGQAVAKAIGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVP CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHEEEECCCCCCCEEECC FTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAFGRALRAAVEL HHHHCCCEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH DERAAGQIPSTKGSL HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA