| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hisD [H]
Identifier: 116688449
GI number: 116688449
Start: 474887
End: 476203
Strand: Direct
Name: hisD [H]
Synonym: Bcen2424_0425
Alternate gene names: 116688449
Gene position: 474887-476203 (Clockwise)
Preceding gene: 116688448
Following gene: 116688450
Centisome position: 13.63
GC content: 69.63
Gene sequence:
>1317_bases ATGTCCATCACCATCCGCAAGCTCGATTCGACGAACGAAGGCTTCGGCGCCGCGCTGCGCGCCGTGCTCGCGTTCGAGGC GAGCGAAGACGAAGCGATCGAGCAATCGGTCGCGAAGATCCTCGCCGACGTGAAGTCGCGCGGCGACGCCGCGGTGCTCG AGTACACGAACCGTTTCGACCGGCTGAGCGCGAACAGCGTCGCCGCGCTCGAACTGCCGCAGGACGCGCTGCAGACGGCG CTCGACGGCCTCGCGCCGAAGGCGCGCGCGGCGCTGGAAGCGGCCGCGGCGCGGGTGCGCGCGTACCACGAGAAGCAGAA GATCGAATGCGGCACGCATAGCTGGCAGTACACGGAAAGCGACGGCACGGTGCTCGGCCAGAAGGTCACGCCGCTTGACC GCGTCGGCCTGTACGTGCCGGGCGGCAAGGCCGCGTATCCGTCGTCGGTGCTGATGAACGCGATTCCGGCGCGCGTCGCG GGCGTCGGCGAGATCGTGATGGTCGTGCCGACCCCGGACGGCGTGAAGAACGACCTCGTGCTGGCGGCGGCGCTGCTCGG CGGCGTCGATCGCGTGTTCACGATCGGCGGCGCGCAGGCGGTCGGCGCGCTCGCGTACGGCACCGAGACGGTGCCGGCCG TCGACAAGATCTGCGGCCCCGGCAACGCGTACGTCGCGTCGGCGAAGCGCCGCGTGTTCGGCACGGTCGGCATCGACATG ATCGCCGGGCCGTCGGAAATCCTCGTGCTGTGCGACGGGACGACCGATCCGAACTGGGTCGCGATGGACCTGTTCTCGCA GGCCGAGCACGACGAACTCGCGCAGTCGATCCTGCTGTGCCCGGACGCTGCATTCCTCGATCGCGTCGAGAAGGCGATCG GCGAGCTGCTGCCGACGATGCCGCGCCAGGACGTGATCCGCGCGTCGCTCGAAGGCCGCGGCGCGCTGATCAAGGTGCGC GACATGGCCGAGGCATGCCGGATCGCGAACGACATCGCGCCGGAACACCTCGAAATCTCGGCGCTGGAGCCGCAGCAATG GGGCCAGCAGATCCGCCACGCGGGCGCGATCTTCCTCGGCCGCTATACGAGCGAGAGCCTCGGCGACTACTGCGCGGGCC CGAACCACGTGCTGCCGACGTCGCGCACCGCGCGTTTCTCGTCGCCGCTCGGCGTGTACGACTTCATCAAGCGCTCGAGC CTGATCGAGGTCAGCGCGGAAGGCGCGCAGACGCTCGGCGAGATCGCATCCGAGCTCGCCTACGGCGAAGGGCTGCAGGC GCACGCGAGGAGCGCCGAGTTCCGGATGAAGGGCTGA
Upstream 100 bases:
>100_bases CGCGCTGAAACTGAAGCGCGCGGCGCTCAAGCCGATCCTCGACGCGTTCGAACGCGCGTCGCAGAATGGCGGTTGAGCGC ATCACCGTAACGGAACTCCC
Downstream 100 bases:
>100_bases CCGCGCATCGTGCGCGGGGCCGGGCGGGCGCCGAGGCGCCGGCACCGGCGGCACCCGGAGCGGGGCAGGAGACGAGCGCA GGGCGGCAGCCGCCGCCTTG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSITIRKLDSTNEGFGAALRAVLAFEASEDEAIEQSVAKILADVKSRGDAAVLEYTNRFDRLSANSVAALELPQDALQTA LDGLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTESDGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGVKNDLVLAAALLGGVDRVFTIGGAQAVGALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDAAFLDRVEKAIGELLPTMPRQDVIRASLEGRGALIKVR DMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSS LIEVSAEGAQTLGEIASELAYGEGLQAHARSAEFRMKG
Sequences:
>Translated_438_residues MSITIRKLDSTNEGFGAALRAVLAFEASEDEAIEQSVAKILADVKSRGDAAVLEYTNRFDRLSANSVAALELPQDALQTA LDGLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTESDGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGVKNDLVLAAALLGGVDRVFTIGGAQAVGALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDAAFLDRVEKAIGELLPTMPRQDVIRASLEGRGALIKVR DMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSS LIEVSAEGAQTLGEIASELAYGEGLQAHARSAEFRMKG >Mature_437_residues SITIRKLDSTNEGFGAALRAVLAFEASEDEAIEQSVAKILADVKSRGDAAVLEYTNRFDRLSANSVAALELPQDALQTAL DGLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTESDGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAG VGEIVMVVPTPDGVKNDLVLAAALLGGVDRVFTIGGAQAVGALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDMI AGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDAAFLDRVEKAIGELLPTMPRQDVIRASLEGRGALIKVRD MAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSL IEVSAEGAQTLGEIASELAYGEGLQAHARSAEFRMKG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=415, Percent_Identity=41.2048192771084, Blast_Score=283, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6319819, Length=409, Percent_Identity=35.4523227383863, Blast_Score=236, Evalue=7e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46430; Mature: 46299
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITIRKLDSTNEGFGAALRAVLAFEASEDEAIEQSVAKILADVKSRGDAAVLEYTNRFD CCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RLSANSVAALELPQDALQTALDGLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTES CCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGVKNDLV CCCEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH LAAALLGGVDRVFTIGGAQAVGALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCHHEEEECCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDAAFLDRVEKAIGELLPTM ECCCCEEEEEECCCCCCCEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC PRQDVIRASLEGRGALIKVRDMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLG CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSLIEVSAEGAQTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH YGEGLQAHARSAEFRMKG HCCCCHHHHCCCCEEECC >Mature Secondary Structure SITIRKLDSTNEGFGAALRAVLAFEASEDEAIEQSVAKILADVKSRGDAAVLEYTNRFD CEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH RLSANSVAALELPQDALQTALDGLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTES CCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGVKNDLV CCCEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH LAAALLGGVDRVFTIGGAQAVGALAYGTETVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCCHHEEEECCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDAAFLDRVEKAIGELLPTM ECCCCEEEEEECCCCCCCEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC PRQDVIRASLEGRGALIKVRDMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLG CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSLIEVSAEGAQTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHH YGEGLQAHARSAEFRMKG HCCCCHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA