| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mlaA [H]
Identifier: 116688441
GI number: 116688441
Start: 468641
End: 469603
Strand: Direct
Name: mlaA [H]
Synonym: Bcen2424_0417
Alternate gene names: 116688441
Gene position: 468641-469603 (Clockwise)
Preceding gene: 116688440
Following gene: 116688442
Centisome position: 13.45
GC content: 70.4
Gene sequence:
>963_bases ATGCACACGATCCGCATCAGGCACGCCGCGCTGGCGATGGCGGCAGTCGCCGCGTTGAGCGGCTGCGCGACCGTGCAGAC GCCGACCAAGGGCGATCCGCTCGAAGGCTTCAACCGGTCGATGTACAAGTTCAACGACACGGTCGATACGTACGCGCTGA AGCCGGTCGCGAAGGGCTACCAGTACGTGGTGCCGCAGCCGGTGCGCGACAGCGTGACGAACTTCTTCTCGAACATCGGC GACGTCTACATCGCGGCGAACAACATCGTGCAGCTGCGGATCGCGGACGGCGTCGGCGACATCATGCGCGTCGTGATCAA CACGGTGTTCGGCGTCGGCGGCCTGTTCGACGTCGCGACGATCGCGAAGCTGCCGAAGCACACGGCCGACTTCGGGATCA CGATGGGCCGCTACGGCGTGCCGTCGGGCCCGTATCTCGTGCTGCCGCTGCTCGGCCCGAGTACGCTGCGCGACACGGCC GGCCTCGGCGTCGACTACGTCGGCAACCCGCTCACCTACGTGAAGCCGGACGGCCTGAGCTGGGGCCTGTTCGGCGTGAA CCTGGTCAACACGCGCGCGAACCTGCTCGGCGCAGGCGACGTGCTGGATGCCGCGGCGCTCGACAAGTATTCGTTCGTGC GCAACGCGTACCTGCAGCGTCGCCAGATGCTGATCAGCAACGCGCGCGGCGAGGCCGCCGCGACGTCGAGCAACGACGCG CTGCCGAAGTACGATCTGCCGGAAGACGGCGCGGCACCGGCGGCAGCCGGCGCGGCCGGAACGGCGGGCGCGGCAGCGGT GGGCGGCGCGGCGCCGGCGCCCGCATCGGGCGCGGCGGTGGCTGCGCCGGCCTCGGGCACGGCCGAAGCGCCGAATCCGG CCAGCGAAACGAACGTGCCGGCGATGCAGGTGGCGCCGCCGTCGCCGGGCGGGTTCCGGTTCCCGAGCATCCGGCTGCAC TGA
Upstream 100 bases:
>100_bases GCCGCGCCGGCCCCGGTGGCGGTACCGGCGTCGGCGGTGTCCGGCGCGTCCGGCTCGGCGGCTCAATAACCACACGAGAG AAAACAAGAGGGTAATGACC
Downstream 100 bases:
>100_bases CGGACTTACATTCGTTACAGCCGGAAACGATTCAGTCGGTAGCGTAGGCGAACTTGCGCGTAAGCTACCTGCTCCAACCT TCGCATCGACTCATTCATGC
Product: VacJ family lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MHTIRIRHAALAMAAVAALSGCATVQTPTKGDPLEGFNRSMYKFNDTVDTYALKPVAKGYQYVVPQPVRDSVTNFFSNIG DVYIAANNIVQLRIADGVGDIMRVVINTVFGVGGLFDVATIAKLPKHTADFGITMGRYGVPSGPYLVLPLLGPSTLRDTA GLGVDYVGNPLTYVKPDGLSWGLFGVNLVNTRANLLGAGDVLDAAALDKYSFVRNAYLQRRQMLISNARGEAAATSSNDA LPKYDLPEDGAAPAAAGAAGTAGAAAVGGAAPAPASGAAVAAPASGTAEAPNPASETNVPAMQVAPPSPGGFRFPSIRLH
Sequences:
>Translated_320_residues MHTIRIRHAALAMAAVAALSGCATVQTPTKGDPLEGFNRSMYKFNDTVDTYALKPVAKGYQYVVPQPVRDSVTNFFSNIG DVYIAANNIVQLRIADGVGDIMRVVINTVFGVGGLFDVATIAKLPKHTADFGITMGRYGVPSGPYLVLPLLGPSTLRDTA GLGVDYVGNPLTYVKPDGLSWGLFGVNLVNTRANLLGAGDVLDAAALDKYSFVRNAYLQRRQMLISNARGEAAATSSNDA LPKYDLPEDGAAPAAAGAAGTAGAAAVGGAAPAPASGAAVAAPASGTAEAPNPASETNVPAMQVAPPSPGGFRFPSIRLH >Mature_320_residues MHTIRIRHAALAMAAVAALSGCATVQTPTKGDPLEGFNRSMYKFNDTVDTYALKPVAKGYQYVVPQPVRDSVTNFFSNIG DVYIAANNIVQLRIADGVGDIMRVVINTVFGVGGLFDVATIAKLPKHTADFGITMGRYGVPSGPYLVLPLLGPSTLRDTA GLGVDYVGNPLTYVKPDGLSWGLFGVNLVNTRANLLGAGDVLDAAALDKYSFVRNAYLQRRQMLISNARGEAAATSSNDA LPKYDLPEDGAAPAAAGAAGTAGAAAVGGAAPAPASGAAVAAPASGTAEAPNPASETNVPAMQVAPPSPGGFRFPSIRLH
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=231, Percent_Identity=37.6623376623377, Blast_Score=133, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 32912; Mature: 32912
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTIRIRHAALAMAAVAALSGCATVQTPTKGDPLEGFNRSMYKFNDTVDTYALKPVAKGY CCEEEHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCC QYVVPQPVRDSVTNFFSNIGDVYIAANNIVQLRIADGVGDIMRVVINTVFGVGGLFDVAT EEECCCCHHHHHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH IAKLPKHTADFGITMGRYGVPSGPYLVLPLLGPSTLRDTAGLGVDYVGNPLTYVKPDGLS HHHCCCCHHHHCEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCCE WGLFGVNLVNTRANLLGAGDVLDAAALDKYSFVRNAYLQRRQMLISNARGEAAATSSNDA ECEEEEEEECCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPKYDLPEDGAAPAAAGAAGTAGAAAVGGAAPAPASGAAVAAPASGTAEAPNPASETNVP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC AMQVAPPSPGGFRFPSIRLH EEEECCCCCCCCCCCCEEEC >Mature Secondary Structure MHTIRIRHAALAMAAVAALSGCATVQTPTKGDPLEGFNRSMYKFNDTVDTYALKPVAKGY CCEEEHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCC QYVVPQPVRDSVTNFFSNIGDVYIAANNIVQLRIADGVGDIMRVVINTVFGVGGLFDVAT EEECCCCHHHHHHHHHHCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH IAKLPKHTADFGITMGRYGVPSGPYLVLPLLGPSTLRDTAGLGVDYVGNPLTYVKPDGLS HHHCCCCHHHHCEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCCE WGLFGVNLVNTRANLLGAGDVLDAAALDKYSFVRNAYLQRRQMLISNARGEAAATSSNDA ECEEEEEEECCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPKYDLPEDGAAPAAAGAAGTAGAAAVGGAAPAPASGAAVAAPASGTAEAPNPASETNVP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC AMQVAPPSPGGFRFPSIRLH EEEECCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]