| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mlaC [H]
Identifier: 116688442
GI number: 116688442
Start: 469700
End: 470344
Strand: Direct
Name: mlaC [H]
Synonym: Bcen2424_0418
Alternate gene names: 116688442
Gene position: 469700-470344 (Clockwise)
Preceding gene: 116688441
Following gene: 116688443
Centisome position: 13.48
GC content: 61.4
Gene sequence:
>645_bases ATGCAGGCCACTATGATGAAAAAACTGTTCCTGATCCCCGTTTTCGCGGCGCTGTTCTCGTTCGGCAGCGCAGCTCACGC GCAAGTCGACCAGTCGAACCCGCAAGCGCTGATCAAGACGGCGACCCAGCAGGTGCTCGACGAAGTCAAGCAGCAGACGA TCAAGCAGGGCGACACCAACCGCATCATCTCGATCGTCAACAAGGACATCCTGCCGTACACCGATTTCCGCCGCACCACG CAGCTCGCGATGGGCCGCAACTGGCGCACGGCGACGGCCGAGCAGCAGCAGCAGGTTCAGGAGCAGTTCAAGCTGCTGCT GATTCGCACGTATTCGGGCGCGCTCGCGCAGTTGAAGCCGGACCAACAGATCCAGTACCCGCCGTTCCGCGCCGATCCGG CCGATACCGACGTCGTCGTGAAGACGGTTGCGCTGAACAACGGTCAGCCGGTCCAGATCGACTACCGCCTGTACAAGACG GCGAACGGCTGGAAGGTGTATGACCTGAACGTGCTCGGCGCATGGCTGATCCAGACGTACCAGCAGCAGTTCAACGAGAA GATCCAGCAAAGCGGCGTGGACGGCCTGATCAAGTTCCTGACGCAGCGCAACCAGGAACTTGCCGCGGGCAAGCAGGCGT CGTGA
Upstream 100 bases:
>100_bases CTGACGGACTTACATTCGTTACAGCCGGAAACGATTCAGTCGGTAGCGTAGGCGAACTTGCGCGTAAGCTACCTGCTCCA ACCTTCGCATCGACTCATTC
Downstream 100 bases:
>100_bases GCGGCTTCGAAGCCGGCTCCTCGCTGACCGTCGCGAGCGCGAAGTCCGCGCTCGCGGACGGTCTTGCGCGCATCGGCGCC GGCGCGACCGCCGTCGATTG
Product: toluene tolerance family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQATMMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIISIVNKDILPYTDFRRTT QLAMGRNWRTATAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKT ANGWKVYDLNVLGAWLIQTYQQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS
Sequences:
>Translated_214_residues MQATMMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIISIVNKDILPYTDFRRTT QLAMGRNWRTATAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKT ANGWKVYDLNVLGAWLIQTYQQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS >Mature_214_residues MQATMMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIISIVNKDILPYTDFRRTT QLAMGRNWRTATAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKT ANGWKVYDLNVLGAWLIQTYQQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=203, Percent_Identity=26.6009852216749, Blast_Score=74, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 24235; Mature: 24235
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQATMMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTN CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH RIISIVNKDILPYTDFRRTTQLAMGRNWRTATAEQQQQVQEQFKLLLIRTYSGALAQLKP HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCC DQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKTANGWKVYDLNVLGAWLIQTY CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHH QQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS HHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MQATMMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTN CCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH RIISIVNKDILPYTDFRRTTQLAMGRNWRTATAEQQQQVQEQFKLLLIRTYSGALAQLKP HHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCC DQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKTANGWKVYDLNVLGAWLIQTY CCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHH QQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS HHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]