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The map label for this gene is yrbD [C]

Identifier: 116688440

GI number: 116688440

Start: 468040

End: 468609

Strand: Direct

Name: yrbD [C]

Synonym: Bcen2424_0416

Alternate gene names: 116688440

Gene position: 468040-468609 (Clockwise)

Preceding gene: 116688439

Following gene: 116688441

Centisome position: 13.43

GC content: 65.61

Gene sequence:

>570_bases
ATGACGATGAAAAAGACTGCTCTCGACTTCTGGGTCGGCCTGTTCGTGGTGGTGGGCTTCCTTGCGGTGCTGTTCCTGGC
GCTGAAGGTCGGCAACATGAGCTCGCTGTCGTTTCAGCCGACCTACTCGGTGAGGATGAAATTCGACAATATCGGCGGGC
TGAAGCCGCGCGCGGCCGTGAAGAGCGCGGGCGTCGTGGTCGGCCGCGTGAAGTCGATCGGCTTCGATCCGAACACGTAC
CAGGCGGTCGTCACGATCGACGTCGACGGCCAGTACCCGTTCCCGAAGGATTCGTCGGCGAAGATCCTCACGTCGGGCCT
GCTCGGCGAGCAATATATCGGCCTCGATCCGGGCGGCGACACCGAAATGCTGAAGTCCGGCGATACGATCACGATGACGC
AGTCGGCGATCGTGCTCGAGAACCTGATCGGCCAGTTCCTGTACAGCAAGGCCGCGGATGCGGGCGGCGCGAAGCCGGCA
GCGGGGGCGTCGGCCGTTCCGGCCGCGCCGGCCCCGGTGGCGGTACCGGCGTCGGCGGTGTCCGGCGCGTCCGGCTCGGC
GGCTCAATAA

Upstream 100 bases:

>100_bases
CACCAAGACGGTCGTGTTCGCGTCGCTCGCCGTACTCGGCCTCGATTTCCTGCTGACCGCGCTGATGTTCAGCTAAGCCT
CAGCCAAGCCAAATTTTGGA

Downstream 100 bases:

>100_bases
CCACACGAGAGAAAACAAGAGGGTAATGACCATGCACACGATCCGCATCAGGCACGCCGCGCTGGCGATGGCGGCAGTCG
CCGCGTTGAGCGGCTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTMKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKFDNIGGLKPRAAVKSAGVVVGRVKSIGFDPNTY
QAVVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKSGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPA
AGASAVPAAPAPVAVPASAVSGASGSAAQ

Sequences:

>Translated_189_residues
MTMKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKFDNIGGLKPRAAVKSAGVVVGRVKSIGFDPNTY
QAVVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKSGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPA
AGASAVPAAPAPVAVPASAVSGASGSAAQ
>Mature_188_residues
TMKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKFDNIGGLKPRAAVKSAGVVVGRVKSIGFDPNTYQ
AVVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEMLKSGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAA
GASAVPAAPAPVAVPASAVSGASGSAAQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=168, Percent_Identity=48.8095238095238, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 19335; Mature: 19203

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKFDNIGGLKPRAAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCHHHH
KSAGVVVGRVKSIGFDPNTYQAVVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGD
HHCCEEEEHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC
TEMLKSGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAGASAVPAAPAPVAVPASAV
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
SGASGSAAQ
CCCCCCCCC
>Mature Secondary Structure 
TMKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKFDNIGGLKPRAAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEECCCCCCCCHHHH
KSAGVVVGRVKSIGFDPNTYQAVVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGD
HHCCEEEEHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCCEECCCCCCC
TEMLKSGDTITMTQSAIVLENLIGQFLYSKAADAGGAKPAAGASAVPAAPAPVAVPASAV
HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
SGASGSAAQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]