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The map label for this gene is yddA [C]

Identifier: 116688433

GI number: 116688433

Start: 460612

End: 462381

Strand: Reverse

Name: yddA [C]

Synonym: Bcen2424_0409

Alternate gene names: 116688433

Gene position: 462381-460612 (Counterclockwise)

Preceding gene: 116688463

Following gene: 116688432

Centisome position: 13.27

GC content: 66.16

Gene sequence:

>1770_bases
ATGACCCAATCGATCGATCCCGTCCGCTCCGCCTCCGACGCGCCGCAGGACGAGCGCCCGGTATCCGCATGGAGCCTCAT
CAAGCCCTACTGGGTATCGTCCGAATGGAAAATCGCGTGGGGCCTGCTGGTCACGATCATCGCGATCAACCTCTGCGTGG
TCTGGATCAACGTCCGGCTGAACAAGTGGAACGCGCAGTTCTACAACGCGCTGCAGTCGAAGGACGTCCACGACTTCCCG
AACCTGCTGATGCAGTTCTCCGCGCTCGCCTTCGCGTTCATCATCCTCGCCGTGTACGGCCGCTACCTGCGGCAGATGCT
CGGCTTCCGCTGGCGCCAGTGGCTCACCGACCGCTTCCTCGGTCAGTGGCTCGGCGATCGCGCGTTTTACCGGATCGAAC
GTGACCGTCTCGCCGACAACCCCGACCAGCGGATCACCGACGACCTCCAGTCGTTCGCGACCACGACGCTCGCGCTGTCG
CTCGACCTGCTGTCGACGGTCGTCACGCTCGTGTCGTTCATCACGATCCTGTGGTCGCTCGCCGGCGCGCTGACGTTCAC
GCTCGGCGCGACGCCGATTGCGATTCCCGGCTACATGGTGTGGGCGGCCGCGCTGTACGCGGTGATCGGCTCGCTGATCA
TCCAGAAGGTCGGCCATCCGCTCGTGTCGATCAACTACCAGCAGCAGCGCGTCGAGGCCGATTTCCGCTTCGGGCTGATC
CGCGTGCGCGAGAACGCCGAGCAGATCGCGTTCTACGACGGCGAGAAGACCGAGGCCGGCAACGCGCAGACCCTCTTCAC
GCGCATCCGCGACAACTGGTGGCGCGTGATGAAGTACACGAAGCGGCTCACGTTCGTGCTGAGCTTCTACGGGCAGATCG
CGATCATCTTCCCGCTCGTCGTCGCGGCGCCGCGCTACTTTGCCGGTGCGTTCTCGTTCGGCGTGCTGATGCAGATCTCG
TCGGCGTTCGGCACCGTCAGCGACTCGTTCTCGTGGTTCATCAACAGCTACTCGACCCTCGTCGAATGGCGCGCCACCGT
CAACCGTCTGCGCGAATTCAAGCGTGTGATGGGCACGTCGCACCTGAAGGAAAGCCTGTCGCCCGCGACCGAGCACGGCG
GCATCAACCTGCACTACATCGACGCCGCGAAACTGTCGACGTCGTCGCTCAAGCTCGCGCTGCCGAACGGCAACGCGCTC
GCGAACATCGGCGACGTCACGATCGAGCCCGGCTCGCGCTGGCTCGTGATCGGCAAGTCGGGTTCCGGCAAGAGCACGTT
CATGCGCGCGCTCGCGGGCCTCTGGCCGTTCGGCGACGGCGCGATCGACGCGCCGGTCGGCGCGCGGATGATGTTCGTGC
CGCAAACCAGCTATTTGCCGATCGGCACGCTGAAGGCCGCGCTCACCTACCCGGCGACGCCCGACACCTTCAGCGACGAA
GCGTGCCGCGATGCGCTGCGCGCGTGCCGCCTCGAGGATTACGTCGAGCGCCTCGACGAAACCGCGCACTGGACCCGCGT
GCTGTCGCCGGGCGAACAGCAGCGCCTGGCCGGCGCGCGCGTGCTGCTGCACAAGCCCGACTTCCTGTTCCTCGACGAAG
CGACCAGCGCGCTCGACGCCGACAACGAAGCCCGCCTCTATCACCTGTTCGCCGAGCGGCTGCCGAAGGCTGCGATCGTC
AGCATCGCGCACCGCGAGTCGCTGGCCGCGTTCCACGTCGGCACGATCAACGTCGAGCGCGTGGGCAGCGACGACAAGGT
CGCCGCGTGA

Upstream 100 bases:

>100_bases
CGGACGCCCGCCGTCAGTCGGCGCCGCGCCCCGGCATGCCGTATCGCGGCGCGCGCCCGGTTTCGCCCGGCCCGCGCGCC
GGCTCATCATCAGGAAGCAC

Downstream 100 bases:

>100_bases
ACGCACGCGCCGCGCACCTCGAACGCATCGCGCTGATCACCGGCGCAGGCTCGGGGATCGGCGCGGCGCTCGCGCGGCGG
CTCGCGGCGCCCGGCATCGC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRLNKWNAQFYNALQSKDVHDFP
NLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFLGQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALS
LDLLSTVVTLVSFITILWSLAGALTFTLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
RVRENAEQIAFYDGEKTEAGNAQTLFTRIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLVVAAPRYFAGAFSFGVLMQIS
SAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTSHLKESLSPATEHGGINLHYIDAAKLSTSSLKLALPNGNAL
ANIGDVTIEPGSRWLVIGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDE
ACRDALRACRLEDYVERLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYHLFAERLPKAAIV
SIAHRESLAAFHVGTINVERVGSDDKVAA

Sequences:

>Translated_589_residues
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRLNKWNAQFYNALQSKDVHDFP
NLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFLGQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALS
LDLLSTVVTLVSFITILWSLAGALTFTLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
RVRENAEQIAFYDGEKTEAGNAQTLFTRIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLVVAAPRYFAGAFSFGVLMQIS
SAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTSHLKESLSPATEHGGINLHYIDAAKLSTSSLKLALPNGNAL
ANIGDVTIEPGSRWLVIGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDE
ACRDALRACRLEDYVERLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYHLFAERLPKAAIV
SIAHRESLAAFHVGTINVERVGSDDKVAA
>Mature_588_residues
TQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRLNKWNAQFYNALQSKDVHDFPN
LLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFLGQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALSL
DLLSTVVTLVSFITILWSLAGALTFTLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLIR
VRENAEQIAFYDGEKTEAGNAQTLFTRIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLVVAAPRYFAGAFSFGVLMQISS
AFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTSHLKESLSPATEHGGINLHYIDAAKLSTSSLKLALPNGNALA
NIGDVTIEPGSRWLVIGKSGSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDEA
CRDALRACRLEDYVERLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDADNEARLYHLFAERLPKAAIVS
IAHRESLAAFHVGTINVERVGSDDKVAA

Specific function: Unknown

COG id: COG4178

COG function: function code R; ABC-type uncharacterized transport system, permease and ATPase components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4826958, Length=549, Percent_Identity=26.775956284153, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI4506341, Length=600, Percent_Identity=23.8333333333333, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI9945308, Length=534, Percent_Identity=25.6554307116105, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI7262393, Length=597, Percent_Identity=24.1206030150754, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI255708477, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI148612844, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI9955966, Length=249, Percent_Identity=27.3092369477912, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI45243524, Length=249, Percent_Identity=27.3092369477912, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI9955968, Length=249, Percent_Identity=27.3092369477912, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI134142340, Length=417, Percent_Identity=23.9808153477218, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI134142337, Length=417, Percent_Identity=23.9808153477218, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI134142342, Length=417, Percent_Identity=23.9808153477218, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI134142345, Length=417, Percent_Identity=23.9808153477218, Blast_Score=71, Evalue=4e-12,
Organism=Homo sapiens, GI9955963, Length=178, Percent_Identity=30.8988764044944, Blast_Score=71, Evalue=4e-12,
Organism=Escherichia coli, GI1787772, Length=544, Percent_Identity=33.0882352941176, Blast_Score=306, Evalue=2e-84,
Organism=Escherichia coli, GI1786575, Length=336, Percent_Identity=25, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787112, Length=200, Percent_Identity=31, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787143, Length=383, Percent_Identity=22.7154046997389, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786654, Length=279, Percent_Identity=25.4480286738351, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17542146, Length=587, Percent_Identity=24.8722316865417, Blast_Score=175, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17532409, Length=510, Percent_Identity=26.2745098039216, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17532411, Length=512, Percent_Identity=25.78125, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17558960, Length=585, Percent_Identity=27.1794871794872, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17564250, Length=567, Percent_Identity=25.9259259259259, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI72000520, Length=548, Percent_Identity=25.1824817518248, Blast_Score=118, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI72000518, Length=593, Percent_Identity=25.2951096121417, Blast_Score=118, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71992285, Length=197, Percent_Identity=34.5177664974619, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=287, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI86564969, Length=426, Percent_Identity=24.1784037558685, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25146765, Length=259, Percent_Identity=26.6409266409266, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71992070, Length=259, Percent_Identity=26.6409266409266, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71992066, Length=259, Percent_Identity=26.6409266409266, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71992080, Length=259, Percent_Identity=26.6409266409266, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=189, Percent_Identity=29.1005291005291, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17556528, Length=183, Percent_Identity=31.1475409836066, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6325110, Length=203, Percent_Identity=32.0197044334975, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6324985, Length=252, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24643394, Length=586, Percent_Identity=24.2320819112628, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24638550, Length=566, Percent_Identity=24.9116607773852, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24638552, Length=566, Percent_Identity=24.9116607773852, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24638554, Length=566, Percent_Identity=24.9116607773852, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24638546, Length=566, Percent_Identity=24.9116607773852, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24638556, Length=566, Percent_Identity=24.9116607773852, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24638548, Length=566, Percent_Identity=24.9116607773852, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24638558, Length=539, Percent_Identity=25.2319109461967, Blast_Score=145, Evalue=1e-34,
Organism=Drosophila melanogaster, GI21357907, Length=206, Percent_Identity=32.0388349514563, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI23397593, Length=412, Percent_Identity=24.5145631067961, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010509
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF06472 ABC_membrane_2; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 65933; Mature: 65802

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRL
CCCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE
NKWNAQFYNALQSKDVHDFPNLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFL
ECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALSLDLLSTVVTLVSFITILWSL
HHHHCCHHHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGALTFTLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHEEE
RVRENAEQIAFYDGEKTEAGNAQTLFTRIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLV
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPRYFAGAFSFGVLMQISSAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTS
HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
HLKESLSPATEHGGINLHYIDAAKLSTSSLKLALPNGNALANIGDVTIEPGSRWLVIGKS
HHHHHCCCCHHCCCEEEEEEEHHHCCCCCEEEECCCCCCEEECCCEEECCCCEEEEEECC
GSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDE
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHEECCCCCCCCCHH
ACRDALRACRLEDYVERLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEECHHHHCCC
DNEARLYHLFAERLPKAAIVSIAHRESLAAFHVGTINVERVGSDDKVAA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECEEEEEECCCCCCCCC
>Mature Secondary Structure 
TQSIDPVRSASDAPQDERPVSAWSLIKPYWVSSEWKIAWGLLVTIIAINLCVVWINVRL
CCCCCCHHCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEE
NKWNAQFYNALQSKDVHDFPNLLMQFSALAFAFIILAVYGRYLRQMLGFRWRQWLTDRFL
ECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GQWLGDRAFYRIERDRLADNPDQRITDDLQSFATTTLALSLDLLSTVVTLVSFITILWSL
HHHHCCHHHEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGALTFTLGATPIAIPGYMVWAAALYAVIGSLIIQKVGHPLVSINYQQQRVEADFRFGLI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHEEE
RVRENAEQIAFYDGEKTEAGNAQTLFTRIRDNWWRVMKYTKRLTFVLSFYGQIAIIFPLV
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAPRYFAGAFSFGVLMQISSAFGTVSDSFSWFINSYSTLVEWRATVNRLREFKRVMGTS
HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
HLKESLSPATEHGGINLHYIDAAKLSTSSLKLALPNGNALANIGDVTIEPGSRWLVIGKS
HHHHHCCCCHHCCCEEEEEEEHHHCCCCCEEEECCCCCCEEECCCEEECCCCEEEEEECC
GSGKSTFMRALAGLWPFGDGAIDAPVGARMMFVPQTSYLPIGTLKAALTYPATPDTFSDE
CCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHEECCCCCCCCCHH
ACRDALRACRLEDYVERLDETAHWTRVLSPGEQQRLAGARVLLHKPDFLFLDEATSALDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEECCCEEEEECHHHHCCC
DNEARLYHLFAERLPKAAIVSIAHRESLAAFHVGTINVERVGSDDKVAA
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]