| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is flbA [H]
Identifier: 116688256
GI number: 116688256
Start: 268800
End: 270749
Strand: Direct
Name: flbA [H]
Synonym: Bcen2424_0232
Alternate gene names: 116688256
Gene position: 268800-270749 (Clockwise)
Preceding gene: 116688255
Following gene: 116688257
Centisome position: 7.72
GC content: 69.13
Gene sequence:
>1950_bases ATGAATGTCCGCCGCTTTGCCCAGCCCTCCATGACGACGCCAGCTTCCGACGTTTCCGCGTGCGTTCGACACGCCGCGAC CTTGTGCCAGAACGGACAGTTTGCCGACGCACTGTCACGCGTCGCGCCGCTGCTCGATGCGCCTGCGGTGGACGTCGCGG CGCTGCACGTCGCGGCCGTCTGTGCGCTGGGCCTGAACCGGCTGGCGGATGCCGAGGCGTGGTGGCGGCGCGCGATCGAC GCGATGCCGGCGTTCGAGCCCCCATACGACGGCCTTCACGCGCTGCTGCTGTCGCAGGAGCGCTTGCCCGAAGCCGAAGT GATCCTGCGCCGGCAGCTTGCCTGCGTCGCGCCGTTGCGCGCGTCGCACCATCACCGGTTCGGCAAGGTGCTCGAAGCGC TCGGCCGGCTCGACGAAGCCGAACAGGCGTTCGGGCAGGCCCTGTCGATCGAGCCGCGGTCGCCCGACGTGCTGACCGAT CTCGGCAACCTGCTTCGCATCCTCGCGCGGCCCGCGGAGGCGGAGCTCGCGTACCGGCTCGCGATTGCCGTTCGCGCCGA TCATGTGCTCGCGCACGCGAATCTCGGCGCGATCCTCGTCGACATGCAGCGGCTGCCGGAAGCGGAGGCGGCTAGCCGGC AGACCATCGCACTGTGTCCGGATCATCCGGAAGCGCATTACAACCTCGGCGTCGCGCTGCAGAACCTCGATCGCCTGTCC GAAGCGGAAGCGGCCTATCGCGACGCCATCCGCTGCCGGCCCGGCCTGCCGCAGCCACACAACAATCTCGGCTGCGTCCT GCGTGCGCAGGGCCGCCACGACGAAGCGGCCGTCGCGTTCACCGACGCGCTGGCGCTCGCGCCGCGGATGGCCGAGGTGC ACTACAACCTCGGCACGACCTTGGCGCATGCGGGCCAACTCGACGAAGCCGAACGCGCATACCGTCGCGCGCTCGACCTG CGCGCCGACTATGACGACGCGCGCTTCGGGCTGGCGACGCTGCTGCTCGGCCGGGGACGATTCGAGGAAGGCTGGCGCCG CTACGAATCGCGCTACGAGCAGTCGACGTTCGTGCACCGCCGAACCCGCGAGGTACTGCGGTGCGCGCAGTGGCAAGGCG AGCCGCTAGCCGGCAAGACGCTGCTCGTGTGGCAGGAGGACGGCCTCGGCGATATGCTGCAGTTCAGCCGTTATTTCGCG GAATTTCGCGCGAGGCGGGCGGCGCGGGTGGTGTTCGCGTGCCAGCCGGCGCTGCATCGGCTGATGGAGACGGTCGACGG TGTCGACGCAGTGCTCGATCACGAGGCGGCCACCGCACAGGCCGGGCAATTCGATTACTGGACGAGCCTGTTGAGCGCGC CGATGCACGCGGGCACGACACTCGACACGATCCCGCCGCCGGTGCGGTTCGTGTCCGATCCGGCGTGCGTCGCGCACTGG GGCGCACGCCTCGATGCGTTGCCTGCCGGCCCGCGCGTCGGTCTTGTATGGAAAGGCAATCCGAAGCATCACAACGACGT GCACCGTTCGCTGCCGTCACTGGCATTGCTGACGCCGCTATGGAGCGTGCCGGGCGTGAATTTCGTGAGCCTGCAGAAAG GGCAGGGCGAGGACGAAGCGCGCCAGCCGCCGGGCGGGCTGCCGTTGCTGCACCTGGGCTCGGAGCTCGACGATTTCGCC GATACGGCCGCGATCGTCGCGCAACTCGATCTCGTGGTGTGCGTCGACACGTCGACCGCGCATCTGGCCGCATCGCTCGG CAAGCCCTGCTGGGTGCTGCTGCCGAATCAGGACGTGGACTGGCGGTGGATGCACGACCGTGAGGATTCGCCGTGGTATC CGGGCACGGTGCGGTTGTTCCGGCGCGGGCGCGGCGAGAGCTGGATTCAGATGGCCGAGCGGCTGCGGGGGGTGTTTGCC GCGCATTTCAGGGAGTGCGTCGATGCGTAG
Upstream 100 bases:
>100_bases GCTTCGGTAACCTGTCAATCGACGCTCTCCGTGCCGAAACGGTCGCCCGGGCGCGACACGCGTCGCGCATGCCGGGCTGC CGCCGTGACGGCCGGACGGG
Downstream 100 bases:
>100_bases CCTGTTTGGCATGCCGCGCCGCTCTCCAGCCATTTTTTGTGCCGTTTGTCCGTCAGGGGTGAGGCGATGAAAGTCGCGAT CATGCAACCGTATTTCCTGC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MNVRRFAQPSMTTPASDVSACVRHAATLCQNGQFADALSRVAPLLDAPAVDVAALHVAAVCALGLNRLADAEAWWRRAID AMPAFEPPYDGLHALLLSQERLPEAEVILRRQLACVAPLRASHHHRFGKVLEALGRLDEAEQAFGQALSIEPRSPDVLTD LGNLLRILARPAEAELAYRLAIAVRADHVLAHANLGAILVDMQRLPEAEAASRQTIALCPDHPEAHYNLGVALQNLDRLS EAEAAYRDAIRCRPGLPQPHNNLGCVLRAQGRHDEAAVAFTDALALAPRMAEVHYNLGTTLAHAGQLDEAERAYRRALDL RADYDDARFGLATLLLGRGRFEEGWRRYESRYEQSTFVHRRTREVLRCAQWQGEPLAGKTLLVWQEDGLGDMLQFSRYFA EFRARRAARVVFACQPALHRLMETVDGVDAVLDHEAATAQAGQFDYWTSLLSAPMHAGTTLDTIPPPVRFVSDPACVAHW GARLDALPAGPRVGLVWKGNPKHHNDVHRSLPSLALLTPLWSVPGVNFVSLQKGQGEDEARQPPGGLPLLHLGSELDDFA DTAAIVAQLDLVVCVDTSTAHLAASLGKPCWVLLPNQDVDWRWMHDREDSPWYPGTVRLFRRGRGESWIQMAERLRGVFA AHFRECVDA
Sequences:
>Translated_649_residues MNVRRFAQPSMTTPASDVSACVRHAATLCQNGQFADALSRVAPLLDAPAVDVAALHVAAVCALGLNRLADAEAWWRRAID AMPAFEPPYDGLHALLLSQERLPEAEVILRRQLACVAPLRASHHHRFGKVLEALGRLDEAEQAFGQALSIEPRSPDVLTD LGNLLRILARPAEAELAYRLAIAVRADHVLAHANLGAILVDMQRLPEAEAASRQTIALCPDHPEAHYNLGVALQNLDRLS EAEAAYRDAIRCRPGLPQPHNNLGCVLRAQGRHDEAAVAFTDALALAPRMAEVHYNLGTTLAHAGQLDEAERAYRRALDL RADYDDARFGLATLLLGRGRFEEGWRRYESRYEQSTFVHRRTREVLRCAQWQGEPLAGKTLLVWQEDGLGDMLQFSRYFA EFRARRAARVVFACQPALHRLMETVDGVDAVLDHEAATAQAGQFDYWTSLLSAPMHAGTTLDTIPPPVRFVSDPACVAHW GARLDALPAGPRVGLVWKGNPKHHNDVHRSLPSLALLTPLWSVPGVNFVSLQKGQGEDEARQPPGGLPLLHLGSELDDFA DTAAIVAQLDLVVCVDTSTAHLAASLGKPCWVLLPNQDVDWRWMHDREDSPWYPGTVRLFRRGRGESWIQMAERLRGVFA AHFRECVDA >Mature_649_residues MNVRRFAQPSMTTPASDVSACVRHAATLCQNGQFADALSRVAPLLDAPAVDVAALHVAAVCALGLNRLADAEAWWRRAID AMPAFEPPYDGLHALLLSQERLPEAEVILRRQLACVAPLRASHHHRFGKVLEALGRLDEAEQAFGQALSIEPRSPDVLTD LGNLLRILARPAEAELAYRLAIAVRADHVLAHANLGAILVDMQRLPEAEAASRQTIALCPDHPEAHYNLGVALQNLDRLS EAEAAYRDAIRCRPGLPQPHNNLGCVLRAQGRHDEAAVAFTDALALAPRMAEVHYNLGTTLAHAGQLDEAERAYRRALDL RADYDDARFGLATLLLGRGRFEEGWRRYESRYEQSTFVHRRTREVLRCAQWQGEPLAGKTLLVWQEDGLGDMLQFSRYFA EFRARRAARVVFACQPALHRLMETVDGVDAVLDHEAATAQAGQFDYWTSLLSAPMHAGTTLDTIPPPVRFVSDPACVAHW GARLDALPAGPRVGLVWKGNPKHHNDVHRSLPSLALLTPLWSVPGVNFVSLQKGQGEDEARQPPGGLPLLHLGSELDDFA DTAAIVAQLDLVVCVDTSTAHLAASLGKPCWVLLPNQDVDWRWMHDREDSPWYPGTVRLFRRGRGESWIQMAERLRGVFA AHFRECVDA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=347, Percent_Identity=26.5129682997118, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI32307148, Length=347, Percent_Identity=26.8011527377522, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI301336134, Length=260, Percent_Identity=29.2307692307692, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI83415184, Length=260, Percent_Identity=29.2307692307692, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI118766330, Length=209, Percent_Identity=32.0574162679426, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI118766328, Length=209, Percent_Identity=32.0574162679426, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI22749211, Length=256, Percent_Identity=29.296875, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI224809432, Length=237, Percent_Identity=27.0042194092827, Blast_Score=71, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115532690, Length=302, Percent_Identity=25.4966887417219, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI115532692, Length=302, Percent_Identity=25.4966887417219, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147174, Length=218, Percent_Identity=27.9816513761468, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI17647755, Length=336, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24585827, Length=336, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24585829, Length=336, Percent_Identity=26.1904761904762, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24656717, Length=219, Percent_Identity=28.310502283105, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI18110006, Length=219, Percent_Identity=28.310502283105, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI19920486, Length=204, Percent_Identity=30.8823529411765, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI161076610, Length=204, Percent_Identity=30.8823529411765, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI281364285, Length=220, Percent_Identity=30.9090909090909, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581187, Length=220, Percent_Identity=30.9090909090909, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647123, Length=165, Percent_Identity=28.4848484848485, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71645; Mature: 71645
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVRRFAQPSMTTPASDVSACVRHAATLCQNGQFADALSRVAPLLDAPAVDVAALHVAAV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH CALGLNRLADAEAWWRRAIDAMPAFEPPYDGLHALLLSQERLPEAEVILRRQLACVAPLR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ASHHHRFGKVLEALGRLDEAEQAFGQALSIEPRSPDVLTDLGNLLRILARPAEAELAYRL HHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH AIAVRADHVLAHANLGAILVDMQRLPEAEAASRQTIALCPDHPEAHYNLGVALQNLDRLS HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHH EAEAAYRDAIRCRPGLPQPHNNLGCVLRAQGRHDEAAVAFTDALALAPRMAEVHYNLGTT HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH LAHAGQLDEAERAYRRALDLRADYDDARFGLATLLLGRGRFEEGWRRYESRYEQSTFVHR HHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTREVLRCAQWQGEPLAGKTLLVWQEDGLGDMLQFSRYFAEFRARRAARVVFACQPALHR HHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH LMETVDGVDAVLDHEAATAQAGQFDYWTSLLSAPMHAGTTLDTIPPPVRFVSDPACVAHW HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCHHHHHH GARLDALPAGPRVGLVWKGNPKHHNDVHRSLPSLALLTPLWSVPGVNFVSLQKGQGEDEA CCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCCHH RQPPGGLPLLHLGSELDDFADTAAIVAQLDLVVCVDTSTAHLAASLGKPCWVLLPNQDVD CCCCCCCCHHHCCCHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCEEEEECCCCCC WRWMHDREDSPWYPGTVRLFRRGRGESWIQMAERLRGVFAAHFRECVDA EEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVRRFAQPSMTTPASDVSACVRHAATLCQNGQFADALSRVAPLLDAPAVDVAALHVAAV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH CALGLNRLADAEAWWRRAIDAMPAFEPPYDGLHALLLSQERLPEAEVILRRQLACVAPLR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ASHHHRFGKVLEALGRLDEAEQAFGQALSIEPRSPDVLTDLGNLLRILARPAEAELAYRL HHHHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH AIAVRADHVLAHANLGAILVDMQRLPEAEAASRQTIALCPDHPEAHYNLGVALQNLDRLS HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHH EAEAAYRDAIRCRPGLPQPHNNLGCVLRAQGRHDEAAVAFTDALALAPRMAEVHYNLGTT HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH LAHAGQLDEAERAYRRALDLRADYDDARFGLATLLLGRGRFEEGWRRYESRYEQSTFVHR HHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RTREVLRCAQWQGEPLAGKTLLVWQEDGLGDMLQFSRYFAEFRARRAARVVFACQPALHR HHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH LMETVDGVDAVLDHEAATAQAGQFDYWTSLLSAPMHAGTTLDTIPPPVRFVSDPACVAHW HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCHHHHHH GARLDALPAGPRVGLVWKGNPKHHNDVHRSLPSLALLTPLWSVPGVNFVSLQKGQGEDEA CCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCCHH RQPPGGLPLLHLGSELDDFADTAAIVAQLDLVVCVDTSTAHLAASLGKPCWVLLPNQDVD CCCCCCCCHHHCCCHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCEEEEECCCCCC WRWMHDREDSPWYPGTVRLFRRGRGESWIQMAERLRGVFAAHFRECVDA EEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]