Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688255

Identifier: 116688255

GI number: 116688255

Start: 266987

End: 268591

Strand: Direct

Name: 116688255

Synonym: Bcen2424_0231

Alternate gene names: NA

Gene position: 266987-268591 (Clockwise)

Preceding gene: 116688253

Following gene: 116688256

Centisome position: 7.66

GC content: 70.53

Gene sequence:

>1605_bases
ATGGCTGCCATCCCGTCTACTTCGACCGCAGTCGCTGCCTGCCCGCTGACCGATGCGCAGCAGGCGCTGCTCGCGCGTCT
GCACGCGTATTCGCCCGATGATCCGCATGCGCCGCTGCCGTACAGCCGGCGCCTCGCCGAAGCCGAAGGCTGGTCGCACG
ACCACGCGCTGGCCGTAATCGACGAATACAAGCGCTTCGCGTTTCTCGCGCAGGCGGCCGGGCATCCGGTCACGCCGTCG
GTCGCGGTCGATGCCGCGTGGCATTTCCATCTGCAGTACACGCTCGAATACTGGGACGTCTTCTGCGCCGATGTGCTGCA
CGCACGGCTGCACCATATGCCCGGTACCGGCGCGCCCGACGAGGCCGCCGTGTACGCGCAGCGCTACCGCGACACGCTGG
ACAGCTATCGTCGGCTGTTCGGCTGCGAGCCGCCGGCATCGATCTGGCCGCGTCCGGTCGACCGGCAGGCCGAGGCGGAT
GCAGAGGCGCGGCAGACCGAGCGCATGGCCGCCGTGGCGCCGCGCCGCGCATGGCGCGACCGTCTACCGAAACTCGTGTG
GCCGGCGGCGGCCGCGAGCGTCGCCGCGACCTGCGCATCGGCGCAGGATCTCGACGTGCTGGACTACACGGGACCGCAGT
TTCTCGCGTTCTACGTGCCGGCCTGCATTCTCGCGTTGTTGCTGATCGTCGCGCTCCAGGCCATCGAATTTCGCATCCGG
CGCTGGGGCCGGCGCACGCGCAAGGCTTCGTCCGGGCTGAGCGCCGACGAAGTCGCCTATCTCACCGGCGGCGAAGCACG
GGTCGCGCAGGTCGTGACGATGTCGCTCGCGCATGCGGGCGCGGTCGACTTGTGGAGCGTTCACCGGCAAGGCAGCTACG
TGAAGATCGCGGATCTGGCACGCGCGGGTCGGTACGACGACTACTGCGCGTGGCTCAACGAGCAACCGTCCGGCACCGTG
CGCTACGGCGTCTTTCGGGAGCGGCTTGCGAGGTACGCGCAGGAGGTCGTCGACGGGATGCGTGCGCAGGGCTGGTTCTG
GGCGCCCGGCGAGTTGCGCGCGTCCCGGATGGCCGCGCGCGCGATCGCGTTGCTCGTGCTCGGCACCGGCGCCGCGAAGC
TCGCGGTCGGTTTGAGCCGCGGGCGGCCCGTGCTGCTGCTGTGCATCTGCATGGCGGTGTTCGCGATCGCGTACCGGATC
GTCGCTGGAAGGCTGACCGGCTTCGGGCGCGGCGGCGCCACGGCGGCCGGGCGCGCCGCGCTGCTCGAGCGCCGGAACGC
GCACGATCCGCGGGCTGCGCGCGACGCGCGGCACGTACGCAGCGCGCGGGGAGCGTCCGGGATACGCGACGCCGAACGTG
ACGATCCGGACCCGTTGCTGTGGACCGCAGCGCTGTTCGGTGCAGGCGCGCTGGCCGGTACCGTATGGTCGGCGTATGCA
GGCCCGGTGCTGGTGGCCTCGCAGGTGTCGTCGGCCGCCGCGGCGAAAGCGGGCGGTGGCACTTCGTCCGACAGCAGTTG
CTCGTCGTCGAGCTGCAGTTCGTCGAGTTCGTGCAGTTCCAGCTCGTGCAGTTCGAGCAGTTGCGGGGGGTGTTCGTCGA
ACTGA

Upstream 100 bases:

>100_bases
CCCACGCTATTCCGCCGCCTTTCCGTTGTGCGAGAATCGCCCGCAACGACAACTCCAAGCGTCGAGCGCGGCGGCCGTCC
GCGCATCGCGCCGACTCCCG

Downstream 100 bases:

>100_bases
GCGGACGGCCGGTGTCGTTCAGCGAGGCCCCGCCACGCACGGGGTGACGGGCCATCGCCCGAACAACCGCATGGAATGGG
CTCAGATCGTCGCATCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MAAIPSTSTAVAACPLTDAQQALLARLHAYSPDDPHAPLPYSRRLAEAEGWSHDHALAVIDEYKRFAFLAQAAGHPVTPS
VAVDAAWHFHLQYTLEYWDVFCADVLHARLHHMPGTGAPDEAAVYAQRYRDTLDSYRRLFGCEPPASIWPRPVDRQAEAD
AEARQTERMAAVAPRRAWRDRLPKLVWPAAAASVAATCASAQDLDVLDYTGPQFLAFYVPACILALLLIVALQAIEFRIR
RWGRRTRKASSGLSADEVAYLTGGEARVAQVVTMSLAHAGAVDLWSVHRQGSYVKIADLARAGRYDDYCAWLNEQPSGTV
RYGVFRERLARYAQEVVDGMRAQGWFWAPGELRASRMAARAIALLVLGTGAAKLAVGLSRGRPVLLLCICMAVFAIAYRI
VAGRLTGFGRGGATAAGRAALLERRNAHDPRAARDARHVRSARGASGIRDAERDDPDPLLWTAALFGAGALAGTVWSAYA
GPVLVASQVSSAAAAKAGGGTSSDSSCSSSSCSSSSSCSSSSCSSSSCGGCSSN

Sequences:

>Translated_534_residues
MAAIPSTSTAVAACPLTDAQQALLARLHAYSPDDPHAPLPYSRRLAEAEGWSHDHALAVIDEYKRFAFLAQAAGHPVTPS
VAVDAAWHFHLQYTLEYWDVFCADVLHARLHHMPGTGAPDEAAVYAQRYRDTLDSYRRLFGCEPPASIWPRPVDRQAEAD
AEARQTERMAAVAPRRAWRDRLPKLVWPAAAASVAATCASAQDLDVLDYTGPQFLAFYVPACILALLLIVALQAIEFRIR
RWGRRTRKASSGLSADEVAYLTGGEARVAQVVTMSLAHAGAVDLWSVHRQGSYVKIADLARAGRYDDYCAWLNEQPSGTV
RYGVFRERLARYAQEVVDGMRAQGWFWAPGELRASRMAARAIALLVLGTGAAKLAVGLSRGRPVLLLCICMAVFAIAYRI
VAGRLTGFGRGGATAAGRAALLERRNAHDPRAARDARHVRSARGASGIRDAERDDPDPLLWTAALFGAGALAGTVWSAYA
GPVLVASQVSSAAAAKAGGGTSSDSSCSSSSCSSSSSCSSSSCSSSSCGGCSSN
>Mature_533_residues
AAIPSTSTAVAACPLTDAQQALLARLHAYSPDDPHAPLPYSRRLAEAEGWSHDHALAVIDEYKRFAFLAQAAGHPVTPSV
AVDAAWHFHLQYTLEYWDVFCADVLHARLHHMPGTGAPDEAAVYAQRYRDTLDSYRRLFGCEPPASIWPRPVDRQAEADA
EARQTERMAAVAPRRAWRDRLPKLVWPAAAASVAATCASAQDLDVLDYTGPQFLAFYVPACILALLLIVALQAIEFRIRR
WGRRTRKASSGLSADEVAYLTGGEARVAQVVTMSLAHAGAVDLWSVHRQGSYVKIADLARAGRYDDYCAWLNEQPSGTVR
YGVFRERLARYAQEVVDGMRAQGWFWAPGELRASRMAARAIALLVLGTGAAKLAVGLSRGRPVLLLCICMAVFAIAYRIV
AGRLTGFGRGGATAAGRAALLERRNAHDPRAARDARHVRSARGASGIRDAERDDPDPLLWTAALFGAGALAGTVWSAYAG
PVLVASQVSSAAAAKAGGGTSSDSSCSSSSCSSSSSCSSSSCSSSSCGGCSSN

Specific function: Unknown

COG id: COG4278

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56993; Mature: 56862

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIPSTSTAVAACPLTDAQQALLARLHAYSPDDPHAPLPYSRRLAEAEGWSHDHALAVI
CCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
DEYKRFAFLAQAAGHPVTPSVAVDAAWHFHLQYTLEYWDVFCADVLHARLHHMPGTGAPD
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCH
EAAVYAQRYRDTLDSYRRLFGCEPPASIWPRPVDRQAEADAEARQTERMAAVAPRRAWRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
RLPKLVWPAAAASVAATCASAQDLDVLDYTGPQFLAFYVPACILALLLIVALQAIEFRIR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWGRRTRKASSGLSADEVAYLTGGEARVAQVVTMSLAHAGAVDLWSVHRQGSYVKIADLA
HHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHH
RAGRYDDYCAWLNEQPSGTVRYGVFRERLARYAQEVVDGMRAQGWFWAPGELRASRMAAR
HCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHH
AIALLVLGTGAAKLAVGLSRGRPVLLLCICMAVFAIAYRIVAGRLTGFGRGGATAAGRAA
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LLERRNAHDPRAARDARHVRSARGASGIRDAERDDPDPLLWTAALFGAGALAGTVWSAYA
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GPVLVASQVSSAAAAKAGGGTSSDSSCSSSSCSSSSSCSSSSCSSSSCGGCSSN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAIPSTSTAVAACPLTDAQQALLARLHAYSPDDPHAPLPYSRRLAEAEGWSHDHALAVI
CCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
DEYKRFAFLAQAAGHPVTPSVAVDAAWHFHLQYTLEYWDVFCADVLHARLHHMPGTGAPD
HHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCH
EAAVYAQRYRDTLDSYRRLFGCEPPASIWPRPVDRQAEADAEARQTERMAAVAPRRAWRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHH
RLPKLVWPAAAASVAATCASAQDLDVLDYTGPQFLAFYVPACILALLLIVALQAIEFRIR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWGRRTRKASSGLSADEVAYLTGGEARVAQVVTMSLAHAGAVDLWSVHRQGSYVKIADLA
HHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEHHHHH
RAGRYDDYCAWLNEQPSGTVRYGVFRERLARYAQEVVDGMRAQGWFWAPGELRASRMAAR
HCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHH
AIALLVLGTGAAKLAVGLSRGRPVLLLCICMAVFAIAYRIVAGRLTGFGRGGATAAGRAA
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LLERRNAHDPRAARDARHVRSARGASGIRDAERDDPDPLLWTAALFGAGALAGTVWSAYA
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GPVLVASQVSSAAAAKAGGGTSSDSSCSSSSCSSSSSCSSSSCSSSSCGGCSSN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA