| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688181
Identifier: 116688181
GI number: 116688181
Start: 174992
End: 175417
Strand: Direct
Name: 116688181
Synonym: Bcen2424_0157
Alternate gene names: NA
Gene position: 174992-175417 (Clockwise)
Preceding gene: 116688176
Following gene: 116688182
Centisome position: 5.02
GC content: 68.08
Gene sequence:
>426_bases TTGGAGACATTGACCCTGGATCAGGCCAAACGCGCGGTGGACGCAGCGTTGCAGGCGGCGCGCCGCGAAAGCTTCCGCCC GATGGCGATGGTAGTTCTCGACGAAGGCGGGCAGGTGAAGTTTGTGGCGCGCGAAGACGGCGCCACGCCGCTGCGTGTGG ACATCGCGCACGGCAAGGCCGCGGCGGCGTTCGGCATGGGCGTATCGTCGCGCACGCTGCAGGAACGTGCAAACGCGAAC CCGGTGTTCTTCAACGCGATCGCACCGGCGGCCGGCGGCAAGTTCATCCCGCAAACGGGCGCCGTCGTGATCGTCTCGGC AAGCGGCCAGGTGCTGGGCGCGATCGGCGCTAGCGGCGGCACCGGCGAAGAGGACGAGGCGATCTGCATCGAAGGTCTGC GCGCAGCAGGCCTCGCGCATCGATAA
Upstream 100 bases:
>100_bases TGGTAATGGGGTTTTCCCTGAATGAATACACAAAACATTCGACAAGGCAGTTTTGTATATATTATGATCTTCACCAGATC GAATCCCGCAGGAGACTAGC
Downstream 100 bases:
>100_bases GGCGGCCCGCGCGATGCAACCCACCTTTGCGGCGGCCACCGGCTGCGCGTGCCACGGCGTAGACGTTCATACGCATATCG TGCCCGCCGAATTTCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Glcg Protein; Conserved Domain Protein
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKAAAAFGMGVSSRTLQERANAN PVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGGTGEEDEAICIEGLRAAGLAHR
Sequences:
>Translated_141_residues METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKAAAAFGMGVSSRTLQERANAN PVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGGTGEEDEAICIEGLRAAGLAHR >Mature_141_residues METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKAAAAFGMGVSSRTLQERANAN PVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGGTGEEDEAICIEGLRAAGLAHR
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14417; Mature: 14417
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKA CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCE AAAFGMGVSSRTLQERANANPVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGG EHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC TGEEDEAICIEGLRAAGLAHR CCCCCCCCEECCHHHCCCCCC >Mature Secondary Structure METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKA CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCE AAAFGMGVSSRTLQERANANPVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGG EHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC TGEEDEAICIEGLRAAGLAHR CCCCCCCCEECCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA