Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688181

Identifier: 116688181

GI number: 116688181

Start: 174992

End: 175417

Strand: Direct

Name: 116688181

Synonym: Bcen2424_0157

Alternate gene names: NA

Gene position: 174992-175417 (Clockwise)

Preceding gene: 116688176

Following gene: 116688182

Centisome position: 5.02

GC content: 68.08

Gene sequence:

>426_bases
TTGGAGACATTGACCCTGGATCAGGCCAAACGCGCGGTGGACGCAGCGTTGCAGGCGGCGCGCCGCGAAAGCTTCCGCCC
GATGGCGATGGTAGTTCTCGACGAAGGCGGGCAGGTGAAGTTTGTGGCGCGCGAAGACGGCGCCACGCCGCTGCGTGTGG
ACATCGCGCACGGCAAGGCCGCGGCGGCGTTCGGCATGGGCGTATCGTCGCGCACGCTGCAGGAACGTGCAAACGCGAAC
CCGGTGTTCTTCAACGCGATCGCACCGGCGGCCGGCGGCAAGTTCATCCCGCAAACGGGCGCCGTCGTGATCGTCTCGGC
AAGCGGCCAGGTGCTGGGCGCGATCGGCGCTAGCGGCGGCACCGGCGAAGAGGACGAGGCGATCTGCATCGAAGGTCTGC
GCGCAGCAGGCCTCGCGCATCGATAA

Upstream 100 bases:

>100_bases
TGGTAATGGGGTTTTCCCTGAATGAATACACAAAACATTCGACAAGGCAGTTTTGTATATATTATGATCTTCACCAGATC
GAATCCCGCAGGAGACTAGC

Downstream 100 bases:

>100_bases
GGCGGCCCGCGCGATGCAACCCACCTTTGCGGCGGCCACCGGCTGCGCGTGCCACGGCGTAGACGTTCATACGCATATCG
TGCCCGCCGAATTTCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glcg Protein; Conserved Domain Protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKAAAAFGMGVSSRTLQERANAN
PVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGGTGEEDEAICIEGLRAAGLAHR

Sequences:

>Translated_141_residues
METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKAAAAFGMGVSSRTLQERANAN
PVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGGTGEEDEAICIEGLRAAGLAHR
>Mature_141_residues
METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKAAAAFGMGVSSRTLQERANAN
PVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGGTGEEDEAICIEGLRAAGLAHR

Specific function: Unknown

COG id: COG3193

COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14417; Mature: 14417

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKA
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCE
AAAFGMGVSSRTLQERANANPVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGG
EHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC
TGEEDEAICIEGLRAAGLAHR
CCCCCCCCEECCHHHCCCCCC
>Mature Secondary Structure
METLTLDQAKRAVDAALQAARRESFRPMAMVVLDEGGQVKFVAREDGATPLRVDIAHGKA
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCE
AAAFGMGVSSRTLQERANANPVFFNAIAPAAGGKFIPQTGAVVIVSASGQVLGAIGASGG
EHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCC
TGEEDEAICIEGLRAAGLAHR
CCCCCCCCEECCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA