| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688182
Identifier: 116688182
GI number: 116688182
Start: 175431
End: 176471
Strand: Direct
Name: 116688182
Synonym: Bcen2424_0158
Alternate gene names: NA
Gene position: 175431-176471 (Clockwise)
Preceding gene: 116688181
Following gene: 116688183
Centisome position: 5.04
GC content: 65.23
Gene sequence:
>1041_bases ATGCAACCCACCTTTGCGGCGGCCACCGGCTGCGCGTGCCACGGCGTAGACGTTCATACGCATATCGTGCCCGCCGAATT TCCGCGCTATCTGGGCGTACATGCGCCGCGCGACTGGCCTTCGACGCGTCCCGCGCACGCATGCCATCGCCATGTGGTGA TCGACGAGAAGATTTACCGGACGATTTCGGATCTGTGTTGGGACACGCACAAACGCGTCGTCGATATGGACGCGCAGCGC GTGCAGATTCATGCAATCTCGCCGATGCCGGAACTGCTGTCGTACTGGATGTCGCCCGGCGATGCATTGCCGCTTCTCCA GTACTTGAATGACACGATCGGTGCGATGGTCGACACGAGCGCGGGCCGCATGATCGGCCTTGGCGCGGTGCCGCTGCAAG ACGTCGATCTGGCGATCCGCGAACTCGAACAGCTGATGGCGACGCCTGGTTTCGCTGGCGTCGAGATCGGCAGCAATATC AACGGCGCGCCGATCGGCGCGGCCCAGTTCGACGCGTTCTTCGAAGCCGCCGAAGCGCTCGGCGCCGCGGTGTTCGTGCA TGCGTTGCGGCCGGTCGGCAAGGAGCGGCTCGTCGGCCCCGCGCAACTGGTACAGGCGCTCGCTTATCCGTCGGATGTCG GGCTTGCGGCGGCATCGGCGATCACGTCGAATCTGATCGTCCGGCATCCCAAACTTCGCATCGCCTTCAGTCACGGCGGC GGCACGCTCGCATCGCTGCTGCCGCGTCTCGAGCAGGCGAGCCAGGTCTTCGAGCCGCTGCGCGGTGCGCTGCAAGCGTC GCCGCGAGAGCAGGCGCGGCGCCTGTGGTACGACGCGCTCGTGTTCGATCCGGCCACCTTGCGCCATCTCGTCGATACGT TCGGCGACACGCGCGTGATGCTGGGCACCGATTATCCGTTTGGGTTCCGCGAGCGCGACCCCGTGGCGAGCGTCGAAGCG CTTGACCTCGACGTCGCGGCCGAGGAACGGCTCATCTATCGCAACGCCCGGGAATTTCTGGGCATCAGGAATGGAGCATG A
Upstream 100 bases:
>100_bases GCGATCGGCGCTAGCGGCGGCACCGGCGAAGAGGACGAGGCGATCTGCATCGAAGGTCTGCGCGCAGCAGGCCTCGCGCA TCGATAAGGCGGCCCGCGCG
Downstream 100 bases:
>100_bases CATGACACAGTGCCTGGTAACGGGGCTGAGAGGCATCGAAATCGGCGTGCCCGATCTGGAACTGGCGGCCCGTTTCTACG CCGACACGTGGCACCTGACC
Product: aminocarboxymuconate-semialdehyde decarboxylase
Products: NA
Alternate protein names: 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Tryptophan 2 3-Dioxygenase; Amidohydrolase Family; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; Amidase; Amidohydrolase
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYRTISDLCWDTHKRVVDMDAQR VQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTSAGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNI NGAPIGAAQFDAFFEAAEALGAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVMLGTDYPFGFRERDPVASVEA LDLDVAAEERLIYRNAREFLGIRNGA
Sequences:
>Translated_346_residues MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYRTISDLCWDTHKRVVDMDAQR VQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTSAGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNI NGAPIGAAQFDAFFEAAEALGAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVMLGTDYPFGFRERDPVASVEA LDLDVAAEERLIYRNAREFLGIRNGA >Mature_346_residues MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYRTISDLCWDTHKRVVDMDAQR VQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTSAGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNI NGAPIGAAQFDAFFEAAEALGAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVMLGTDYPFGFRERDPVASVEA LDLDVAAEERLIYRNAREFLGIRNGA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=330, Percent_Identity=30.9090909090909, Blast_Score=188, Evalue=7e-48, Organism=Caenorhabditis elegans, GI71995651, Length=329, Percent_Identity=28.2674772036474, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI71995655, Length=377, Percent_Identity=25.4641909814324, Blast_Score=137, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37650; Mature: 37650
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYR CCCCCCCCCCCEECCCCCEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHCEEEHHHHHH TISDLCWDTHKRVVDMDAQRVQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTS HHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECC AGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNINGAPIGAAQFDAFFEAAEAL CCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH GAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCEEEEEEECCC GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVM CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE LGTDYPFGFRERDPVASVEALDLDVAAEERLIYRNAREFLGIRNGA EECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYR CCCCCCCCCCCEECCCCCEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHCEEEHHHHHH TISDLCWDTHKRVVDMDAQRVQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTS HHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECC AGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNINGAPIGAAQFDAFFEAAEAL CCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH GAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCEEEEEEECCC GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVM CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE LGTDYPFGFRERDPVASVEALDLDVAAEERLIYRNAREFLGIRNGA EECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA