Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688182

Identifier: 116688182

GI number: 116688182

Start: 175431

End: 176471

Strand: Direct

Name: 116688182

Synonym: Bcen2424_0158

Alternate gene names: NA

Gene position: 175431-176471 (Clockwise)

Preceding gene: 116688181

Following gene: 116688183

Centisome position: 5.04

GC content: 65.23

Gene sequence:

>1041_bases
ATGCAACCCACCTTTGCGGCGGCCACCGGCTGCGCGTGCCACGGCGTAGACGTTCATACGCATATCGTGCCCGCCGAATT
TCCGCGCTATCTGGGCGTACATGCGCCGCGCGACTGGCCTTCGACGCGTCCCGCGCACGCATGCCATCGCCATGTGGTGA
TCGACGAGAAGATTTACCGGACGATTTCGGATCTGTGTTGGGACACGCACAAACGCGTCGTCGATATGGACGCGCAGCGC
GTGCAGATTCATGCAATCTCGCCGATGCCGGAACTGCTGTCGTACTGGATGTCGCCCGGCGATGCATTGCCGCTTCTCCA
GTACTTGAATGACACGATCGGTGCGATGGTCGACACGAGCGCGGGCCGCATGATCGGCCTTGGCGCGGTGCCGCTGCAAG
ACGTCGATCTGGCGATCCGCGAACTCGAACAGCTGATGGCGACGCCTGGTTTCGCTGGCGTCGAGATCGGCAGCAATATC
AACGGCGCGCCGATCGGCGCGGCCCAGTTCGACGCGTTCTTCGAAGCCGCCGAAGCGCTCGGCGCCGCGGTGTTCGTGCA
TGCGTTGCGGCCGGTCGGCAAGGAGCGGCTCGTCGGCCCCGCGCAACTGGTACAGGCGCTCGCTTATCCGTCGGATGTCG
GGCTTGCGGCGGCATCGGCGATCACGTCGAATCTGATCGTCCGGCATCCCAAACTTCGCATCGCCTTCAGTCACGGCGGC
GGCACGCTCGCATCGCTGCTGCCGCGTCTCGAGCAGGCGAGCCAGGTCTTCGAGCCGCTGCGCGGTGCGCTGCAAGCGTC
GCCGCGAGAGCAGGCGCGGCGCCTGTGGTACGACGCGCTCGTGTTCGATCCGGCCACCTTGCGCCATCTCGTCGATACGT
TCGGCGACACGCGCGTGATGCTGGGCACCGATTATCCGTTTGGGTTCCGCGAGCGCGACCCCGTGGCGAGCGTCGAAGCG
CTTGACCTCGACGTCGCGGCCGAGGAACGGCTCATCTATCGCAACGCCCGGGAATTTCTGGGCATCAGGAATGGAGCATG
A

Upstream 100 bases:

>100_bases
GCGATCGGCGCTAGCGGCGGCACCGGCGAAGAGGACGAGGCGATCTGCATCGAAGGTCTGCGCGCAGCAGGCCTCGCGCA
TCGATAAGGCGGCCCGCGCG

Downstream 100 bases:

>100_bases
CATGACACAGTGCCTGGTAACGGGGCTGAGAGGCATCGAAATCGGCGTGCCCGATCTGGAACTGGCGGCCCGTTTCTACG
CCGACACGTGGCACCTGACC

Product: aminocarboxymuconate-semialdehyde decarboxylase

Products: NA

Alternate protein names: 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Tryptophan 2 3-Dioxygenase; Amidohydrolase Family; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; Amidase; Amidohydrolase

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYRTISDLCWDTHKRVVDMDAQR
VQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTSAGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNI
NGAPIGAAQFDAFFEAAEALGAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG
GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVMLGTDYPFGFRERDPVASVEA
LDLDVAAEERLIYRNAREFLGIRNGA

Sequences:

>Translated_346_residues
MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYRTISDLCWDTHKRVVDMDAQR
VQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTSAGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNI
NGAPIGAAQFDAFFEAAEALGAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG
GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVMLGTDYPFGFRERDPVASVEA
LDLDVAAEERLIYRNAREFLGIRNGA
>Mature_346_residues
MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYRTISDLCWDTHKRVVDMDAQR
VQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTSAGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNI
NGAPIGAAQFDAFFEAAEALGAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG
GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVMLGTDYPFGFRERDPVASVEA
LDLDVAAEERLIYRNAREFLGIRNGA

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI109715856, Length=330, Percent_Identity=30.9090909090909, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI71995651, Length=329, Percent_Identity=28.2674772036474, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI71995655, Length=377, Percent_Identity=25.4641909814324, Blast_Score=137, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37650; Mature: 37650

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYR
CCCCCCCCCCCEECCCCCEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHCEEEHHHHHH
TISDLCWDTHKRVVDMDAQRVQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTS
HHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECC
AGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNINGAPIGAAQFDAFFEAAEAL
CCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
GAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG
HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCEEEEEEECCC
GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVM
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE
LGTDYPFGFRERDPVASVEALDLDVAAEERLIYRNAREFLGIRNGA
EECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQPTFAAATGCACHGVDVHTHIVPAEFPRYLGVHAPRDWPSTRPAHACHRHVVIDEKIYR
CCCCCCCCCCCEECCCCCEEEECCHHHHHHHCCCCCCCCCCCCCHHHHHHCEEEHHHHHH
TISDLCWDTHKRVVDMDAQRVQIHAISPMPELLSYWMSPGDALPLLQYLNDTIGAMVDTS
HHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECC
AGRMIGLGAVPLQDVDLAIRELEQLMATPGFAGVEIGSNINGAPIGAAQFDAFFEAAEAL
CCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHH
GAAVFVHALRPVGKERLVGPAQLVQALAYPSDVGLAAASAITSNLIVRHPKLRIAFSHGG
HHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCEEEEEEECCC
GTLASLLPRLEQASQVFEPLRGALQASPREQARRLWYDALVFDPATLRHLVDTFGDTRVM
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEE
LGTDYPFGFRERDPVASVEALDLDVAAEERLIYRNAREFLGIRNGA
EECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA