Click here to switch to the map view.

The map label for this gene is alpA [C]

Identifier: 116688176

GI number: 116688176

Start: 168700

End: 169842

Strand: Direct

Name: alpA [C]

Synonym: Bcen2424_0152

Alternate gene names: 116688176

Gene position: 168700-169842 (Clockwise)

Preceding gene: 116688174

Following gene: 116688181

Centisome position: 4.84

GC content: 61.24

Gene sequence:

>1143_bases
TTGCAAGTCCGCGTCGAACTTCCAGCCGATCCACTCATCGAGTATTTGAGCCTTTGCACGGCCATCGCCGAGGCTGTCCA
TCCGGCGAGCGCGAGGCACTATCAAGGCATCGAGTGCATCGTCAACAAGATGGTGACGCACCACGTTCCGATGGCTCCGC
CCACGCCAAACGAGAAGTGGCCGTTCCCGGTGGAGTTTCAATCCGTACTGTTGTCCGACGGCGGGCGCACGCTCGATCAA
CTGCTCCCAGACCGGGCAGATGCCGGTCAGATGAGCGCTCTCGACTTGCCGCTCGAACCGGGGCAGCCGCGCCAAATGGT
TGAGCTCGCGATGCCATATCGACTCGACGAGAACGACCGTCGTGCACTGCAAGAGATTCTGCACAACCTGCCGCCGCTGC
AGTATCCGATTTCGGATGCAGACCAGGCCGCGTTTCTCGACGCCTGGTTCAGGCTGAAGGAGCGTCCGGCATGGGAACCT
GTTCTGGTCACGACGGCGTATGTTGGACGCCGCAAGGCAGCGCAGCCGGCGGCTCTGGCTGAACATCAACAGGCACTTCA
GGAGGAATTCAAGAGCGGCAGAATCGAAGCGTTGAATGGCCACCATGTTCCGGTTCCAGTATTGATGGGCGGCAGCTTCA
TTTCGCGGCAGCAGGCTATTGCATATCTCGAGCGCCGTGGCTTTTCCTACGTCAGCGCTGAGCTGGCCGCGGGTGCGGAG
GCGAAGAATGGGCCTGCGGCACCCGAAGCGGAACGAAAGCGGGAGTCAAAGCGCGCGAGCGTTGGGCCACGTGTGCGCGA
AAAGCAGTCACCTGCGAATCCGCAAGCCGAGGAAGGCGATAGCCAGGGCGCTAGGAAAATAGAGTCGACGGGCTCCGAAA
GCAGCGGGAACGGAGCTTCGCAATCTTCAGCCAACAACAGCAGCGTGACGGCAGGAAAGGTCGCGCGCTTGAAGCGAGTC
ATGGAACTCACGGGTCTCGGGCGCAGCTCAATCTACAATCGCATGGACGAGGGGTCGAAGCACTACGATTCGACTTTTCC
GCGTTCCTTCAAGCTTGGGTCTGGCGAGGCTGGCGCGACCGGATGGGACGAAGACGCGGTCAAGTCATGGGTGGCTGCGC
AGGCCGCCGCTCGTCCGAAGTGA

Upstream 100 bases:

>100_bases
CACTAAGTTCGGACCGGTGATGCGTCCGTTCTGGCCCGCGTGACTTTGTAGTTCGCCCCTTATACTCGCAAACTGACGAG
AACAATCCAGCGGGGTCCAA

Downstream 100 bases:

>100_bases
GATATATCGCGTCATTCGTGAGATATATCGCGTCATTCAGCGAAAACCGCACCGCCTCAGCCGGGTTACCGCAGGTGCGT
GCCGGGGTGACCGGCGCCCT

Product: phage transcriptional regulator, AlpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQVRVELPADPLIEYLSLCTAIAEAVHPASARHYQGIECIVNKMVTHHVPMAPPTPNEKWPFPVEFQSVLLSDGGRTLDQ
LLPDRADAGQMSALDLPLEPGQPRQMVELAMPYRLDENDRRALQEILHNLPPLQYPISDADQAAFLDAWFRLKERPAWEP
VLVTTAYVGRRKAAQPAALAEHQQALQEEFKSGRIEALNGHHVPVPVLMGGSFISRQQAIAYLERRGFSYVSAELAAGAE
AKNGPAAPEAERKRESKRASVGPRVREKQSPANPQAEEGDSQGARKIESTGSESSGNGASQSSANNSSVTAGKVARLKRV
MELTGLGRSSIYNRMDEGSKHYDSTFPRSFKLGSGEAGATGWDEDAVKSWVAAQAAARPK

Sequences:

>Translated_380_residues
MQVRVELPADPLIEYLSLCTAIAEAVHPASARHYQGIECIVNKMVTHHVPMAPPTPNEKWPFPVEFQSVLLSDGGRTLDQ
LLPDRADAGQMSALDLPLEPGQPRQMVELAMPYRLDENDRRALQEILHNLPPLQYPISDADQAAFLDAWFRLKERPAWEP
VLVTTAYVGRRKAAQPAALAEHQQALQEEFKSGRIEALNGHHVPVPVLMGGSFISRQQAIAYLERRGFSYVSAELAAGAE
AKNGPAAPEAERKRESKRASVGPRVREKQSPANPQAEEGDSQGARKIESTGSESSGNGASQSSANNSSVTAGKVARLKRV
MELTGLGRSSIYNRMDEGSKHYDSTFPRSFKLGSGEAGATGWDEDAVKSWVAAQAAARPK
>Mature_380_residues
MQVRVELPADPLIEYLSLCTAIAEAVHPASARHYQGIECIVNKMVTHHVPMAPPTPNEKWPFPVEFQSVLLSDGGRTLDQ
LLPDRADAGQMSALDLPLEPGQPRQMVELAMPYRLDENDRRALQEILHNLPPLQYPISDADQAAFLDAWFRLKERPAWEP
VLVTTAYVGRRKAAQPAALAEHQQALQEEFKSGRIEALNGHHVPVPVLMGGSFISRQQAIAYLERRGFSYVSAELAAGAE
AKNGPAAPEAERKRESKRASVGPRVREKQSPANPQAEEGDSQGARKIESTGSESSGNGASQSSANNSSVTAGKVARLKRV
MELTGLGRSSIYNRMDEGSKHYDSTFPRSFKLGSGEAGATGWDEDAVKSWVAAQAAARPK

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41404; Mature: 41404

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVRVELPADPLIEYLSLCTAIAEAVHPASARHYQGIECIVNKMVTHHVPMAPPTPNEKW
CEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC
PFPVEFQSVLLSDGGRTLDQLLPDRADAGQMSALDLPLEPGQPRQMVELAMPYRLDENDR
CCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHH
RALQEILHNLPPLQYPISDADQAAFLDAWFRLKERPAWEPVLVTTAYVGRRKAAQPAALA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHH
EHQQALQEEFKSGRIEALNGHHVPVPVLMGGSFISRQQAIAYLERRGFSYVSAELAAGAE
HHHHHHHHHHHCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
AKNGPAAPEAERKRESKRASVGPRVREKQSPANPQAEEGDSQGARKIESTGSESSGNGAS
CCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
QSSANNSSVTAGKVARLKRVMELTGLGRSSIYNRMDEGSKHYDSTFPRSFKLGSGEAGAT
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCEECCCCCCCCC
GWDEDAVKSWVAAQAAARPK
CCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQVRVELPADPLIEYLSLCTAIAEAVHPASARHYQGIECIVNKMVTHHVPMAPPTPNEKW
CEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC
PFPVEFQSVLLSDGGRTLDQLLPDRADAGQMSALDLPLEPGQPRQMVELAMPYRLDENDR
CCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCHHH
RALQEILHNLPPLQYPISDADQAAFLDAWFRLKERPAWEPVLVTTAYVGRRKAAQPAALA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHHH
EHQQALQEEFKSGRIEALNGHHVPVPVLMGGSFISRQQAIAYLERRGFSYVSAELAAGAE
HHHHHHHHHHHCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
AKNGPAAPEAERKRESKRASVGPRVREKQSPANPQAEEGDSQGARKIESTGSESSGNGAS
CCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
QSSANNSSVTAGKVARLKRVMELTGLGRSSIYNRMDEGSKHYDSTFPRSFKLGSGEAGAT
CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCCEECCCCCCCCC
GWDEDAVKSWVAAQAAARPK
CCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA