| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688104
Identifier: 116688104
GI number: 116688104
Start: 81045
End: 81578
Strand: Reverse
Name: 116688104
Synonym: Bcen2424_0080
Alternate gene names: NA
Gene position: 81578-81045 (Counterclockwise)
Preceding gene: 116688105
Following gene: 116688102
Centisome position: 2.34
GC content: 68.91
Gene sequence:
>534_bases ATGGCCCGCAACATCGAGATCAAAGCCCGCGCCCGCGAATTCGACCGGCTGCGCGAACAGGCGGCCCAACTCGCGACCGA AGCACCGCTGTTCTACCGCCAGCAGGATTTCTTCTATGACGTGCCGCGCGGCCGGCTCAAGCTGCGCCGCTTCGAGGACG GCACGCCGGCCGAGCTGATCTTCTACCAGCGCGACGACCGCGACGGCCCGAAGGCGTCGTACTACACGCGCAGCCCGGTC ACGAACCCCGACGCGATGCATTCGCTGCTCGCGACCGCGCTGACCACGCGCGGGATCGTGACGAAGGAGCGGCACGTGTA CCTCGCGGGCCGCACGCGCATCCACCTCGACCGCGTCGACGGCCTCGGCGATTTCATCGAGCTCGAGGTCGTGCTCGGCC CCGACGACGACGAAGCGGGCGGCGAAGCGGAAGCGCACGAGGTGTTCGCGAAGCTCGGCGTGGCGCAGGACGACCTCGTC GCGGTCGCGTACGTCGATCTGCTGAACGCCGACACCGAGCCCGAAACGGCCTGA
Upstream 100 bases:
>100_bases TCGCGTCGCCGCGCCCCGTCCGCTCGTCACGCCACCATCGCAGGCTTTTTGCTAGATTGTGCGTTCGCACACCGCGAGAC CCCGATTGAAGGAGACCCGC
Downstream 100 bases:
>100_bases TCCGGCCCCACCGAAGGCGGCGCCGCGCGTGCCACCTTCAGCGCCCCTGCCGCTGCCGCCTCCCGGTCACGCAGCGCCGG GCGCCAGATGCGCGAGTGGC
Product: adenylate cyclase
Products: NA
Alternate protein names: Adenylyl Cyclase CyaB
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MARNIEIKARAREFDRLREQAAQLATEAPLFYRQQDFFYDVPRGRLKLRRFEDGTPAELIFYQRDDRDGPKASYYTRSPV TNPDAMHSLLATALTTRGIVTKERHVYLAGRTRIHLDRVDGLGDFIELEVVLGPDDDEAGGEAEAHEVFAKLGVAQDDLV AVAYVDLLNADTEPETA
Sequences:
>Translated_177_residues MARNIEIKARAREFDRLREQAAQLATEAPLFYRQQDFFYDVPRGRLKLRRFEDGTPAELIFYQRDDRDGPKASYYTRSPV TNPDAMHSLLATALTTRGIVTKERHVYLAGRTRIHLDRVDGLGDFIELEVVLGPDDDEAGGEAEAHEVFAKLGVAQDDLV AVAYVDLLNADTEPETA >Mature_176_residues ARNIEIKARAREFDRLREQAAQLATEAPLFYRQQDFFYDVPRGRLKLRRFEDGTPAELIFYQRDDRDGPKASYYTRSPVT NPDAMHSLLATALTTRGIVTKERHVYLAGRTRIHLDRVDGLGDFIELEVVLGPDDDEAGGEAEAHEVFAKLGVAQDDLVA VAYVDLLNADTEPETA
Specific function: Unknown
COG id: COG1437
COG function: function code F; Adenylate cyclase, class 2 (thermophilic)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI32565413, Length=174, Percent_Identity=43.1034482758621, Blast_Score=144, Evalue=3e-35, Organism=Drosophila melanogaster, GI24640251, Length=172, Percent_Identity=36.6279069767442, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19968; Mature: 19836
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNIEIKARAREFDRLREQAAQLATEAPLFYRQQDFFYDVPRGRLKLRRFEDGTPAELI CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCEEEEECCCCCCEEEE FYQRDDRDGPKASYYTRSPVTNPDAMHSLLATALTTRGIVTKERHVYLAGRTRIHLDRVD EEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEECCCEEEEECCEEEEEECCC GLGDFIELEVVLGPDDDEAGGEAEAHEVFAKLGVAQDDLVAVAYVDLLNADTEPETA CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ARNIEIKARAREFDRLREQAAQLATEAPLFYRQQDFFYDVPRGRLKLRRFEDGTPAELI CCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCEEEEECCCCCCEEEE FYQRDDRDGPKASYYTRSPVTNPDAMHSLLATALTTRGIVTKERHVYLAGRTRIHLDRVD EEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEECCCEEEEECCEEEEEECCC GLGDFIELEVVLGPDDDEAGGEAEAHEVFAKLGVAQDDLVAVAYVDLLNADTEPETA CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA