| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mopB [H]
Identifier: 116688062
GI number: 116688062
Start: 42018
End: 42599
Strand: Reverse
Name: mopB [H]
Synonym: Bcen2424_0038
Alternate gene names: 116688062
Gene position: 42599-42018 (Counterclockwise)
Preceding gene: 116688063
Following gene: 116688061
Centisome position: 1.22
GC content: 75.43
Gene sequence:
>582_bases ATGAACGTCGTGATGTCCGGCCGGCGCGCGTGCCGCGCGATTGCGGCGGCGGCACTGGCCGCCGCCGCGTCGCTCGTGTG CGCACCGGCCGGCGCCGCCGACATGAACGCGGTCAACCACCCCGGTTCGATCGCGTCGAGCGTGACGGTCGGTTCGGCCG CGCCGTCGCTCGGCATCGGCGCGGTGCTGCAGACGCTCGTCGGGCTCGCGGTCGTGATCGGCCTCGTGTTCGCGTGCGCG TGGCTCGCCCGCCGCTTCGGCTTCCAGCCCGCGCGGCGCGGCGGCCCGCTGAAGGTCGTGTCCAGCGTCGGGCTCGGCGC GAAGGAAAGCGCGACGATCGTCGAGATCGGCGACACCTGGCTCGTGCTCGGCGTCGCGCCGGGCAACGTGCGATTGCTGC ATACGCTGCCGGCCGGTTCGGCGGCGGCCACCGCGACGGCGACTGCGGGTTCGGCCCCGGCCGACGCGTCCGTCGGCGGC ACTTCGTCCGACGCCGGCCTGCCCGGCACGTTCGGCTCGCGGTTTCGCGACGCGCTCGCGGGCGAAGCCGCGAAACGCCT CGGGCGCGGCAAGGACCGCTGA
Upstream 100 bases:
>100_bases GCCTGATCGCGCAGGGCGAAGTCGTGGTGGTCAACGACAAGTTCGGTATTCGCCTCACCGACATCATCACGCCGGCCGAA CGCATCCGGAAGCTGAATCG
Downstream 100 bases:
>100_bases CATGGCGCCGCGCCCTCTTCCAGTATCCGCATTCCGATGAAACACGCATTCCTGCGTCACGCGGCGCGCGTCGCGCCCGT GCTGATCCTCTGTCTTGCTC
Product: flagellar biosynthesis protein, FliO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNVVMSGRRACRAIAAAALAAAASLVCAPAGAADMNAVNHPGSIASSVTVGSAAPSLGIGAVLQTLVGLAVVIGLVFACA WLARRFGFQPARRGGPLKVVSSVGLGAKESATIVEIGDTWLVLGVAPGNVRLLHTLPAGSAAATATATAGSAPADASVGG TSSDAGLPGTFGSRFRDALAGEAAKRLGRGKDR
Sequences:
>Translated_193_residues MNVVMSGRRACRAIAAAALAAAASLVCAPAGAADMNAVNHPGSIASSVTVGSAAPSLGIGAVLQTLVGLAVVIGLVFACA WLARRFGFQPARRGGPLKVVSSVGLGAKESATIVEIGDTWLVLGVAPGNVRLLHTLPAGSAAATATATAGSAPADASVGG TSSDAGLPGTFGSRFRDALAGEAAKRLGRGKDR >Mature_193_residues MNVVMSGRRACRAIAAAALAAAASLVCAPAGAADMNAVNHPGSIASSVTVGSAAPSLGIGAVLQTLVGLAVVIGLVFACA WLARRFGFQPARRGGPLKVVSSVGLGAKESATIVEIGDTWLVLGVAPGNVRLLHTLPAGSAAATATATAGSAPADASVGG TSSDAGLPGTFGSRFRDALAGEAAKRLGRGKDR
Specific function: Required for both, motility and virulence [H]
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein. Bacterial flagellum basal body [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliO/mopB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022781 [H]
Pfam domain/function: PF04347 FliO [H]
EC number: NA
Molecular weight: Translated: 18784; Mature: 18784
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVVMSGRRACRAIAAAALAAAASLVCAPAGAADMNAVNHPGSIASSVTVGSAAPSLGIG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCCCCCHHH AVLQTLVGLAVVIGLVFACAWLARRFGFQPARRGGPLKVVSSVGLGAKESATIVEIGDTW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCEE LVLGVAPGNVRLLHTLPAGSAAATATATAGSAPADASVGGTSSDAGLPGTFGSRFRDALA EEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH GEAAKRLGRGKDR HHHHHHHCCCCCC >Mature Secondary Structure MNVVMSGRRACRAIAAAALAAAASLVCAPAGAADMNAVNHPGSIASSVTVGSAAPSLGIG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCCCCCHHH AVLQTLVGLAVVIGLVFACAWLARRFGFQPARRGGPLKVVSSVGLGAKESATIVEIGDTW HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCEE LVLGVAPGNVRLLHTLPAGSAAATATATAGSAPADASVGGTSSDAGLPGTFGSRFRDALA EEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH GEAAKRLGRGKDR HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8412685 [H]