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The map label for this gene is fliP [H]

Identifier: 116688061

GI number: 116688061

Start: 41220

End: 41981

Strand: Reverse

Name: fliP [H]

Synonym: Bcen2424_0037

Alternate gene names: 116688061

Gene position: 41981-41220 (Counterclockwise)

Preceding gene: 116688062

Following gene: 116688060

Centisome position: 1.2

GC content: 65.09

Gene sequence:

>762_bases
ATGAAACACGCATTCCTGCGTCACGCGGCGCGCGTCGCGCCCGTGCTGATCCTCTGTCTTGCTCCGGCGCTCGCGTATGC
GCAGGCGAACGGCCTGCCCGCGTTCAACGCGAGCCCGGGCCCGCACGGCGGCACCACCTATTCGCTGAGCGTGCAGACGA
TGCTGCTGCTCACGATGCTGTCGTTCCTGCCGGCGATGCTGCTGATGATGACGAGCTTCACGCGCATCATCATCGTGCTG
TCGCTGCTGCGCCAGGCGCTCGGCACCGCGACGACGCCGCCGAACCAGGTGCTCGTCGGCCTCGCGATGTTCCTCACCTT
CTTCGTGATGTCGCCGGTGCTCGACCGCGCGTACAACGACGGCTACAAGCCGTTCTCCGACGGCTCGATGCCGATGGAGC
AGGCCGTGCAGCGCGGCGTCGCGCCGTTCAAGACCTTCATGCTGAAGCAGACCCGCGAGACCGATCTCGCGCTGTTCGCG
AAGATCTCGAAGGCCGCGCCGATGCAGGGCCCGGAAGACGTGCCGCTGTCGCTGCTGGTGCCCGCGTTCGTCACGAGCGA
GCTGAAGACCGGCTTCCAGATCGGCTTCACGGTGTTCATTCCGTTCCTGATCATCGACATGGTCGTCGCGAGCGTGCTGA
TGTCGATGGGGATGATGATGGTGTCGCCGTCCACCGTGTCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTCGACGGC
TGGCAGCTGCTGATCGGCTCGCTCGCGCAGAGCTTCAGTTAA

Upstream 100 bases:

>100_bases
GCGGTTTCGCGACGCGCTCGCGGGCGAAGCCGCGAAACGCCTCGGGCGCGGCAAGGACCGCTGACATGGCGCCGCGCCCT
CTTCCAGTATCCGCATTCCG

Downstream 100 bases:

>100_bases
GCGGAGGAACACGCGCGATGACGCCCGAACAAGTGATGACGCTGGCGCACCAGGCGATGATGGTCGGCCTGCTGCTCGCG
GCCCCGCTGCTGCTGGTCGC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKHAFLRHAARVAPVLILCLAPALAYAQANGLPAFNASPGPHGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVL
SLLRQALGTATTPPNQVLVGLAMFLTFFVMSPVLDRAYNDGYKPFSDGSMPMEQAVQRGVAPFKTFMLKQTRETDLALFA
KISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTVFIPFLIIDMVVASVLMSMGMMMVSPSTVSLPFKLMLFVLVDG
WQLLIGSLAQSFS

Sequences:

>Translated_253_residues
MKHAFLRHAARVAPVLILCLAPALAYAQANGLPAFNASPGPHGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVL
SLLRQALGTATTPPNQVLVGLAMFLTFFVMSPVLDRAYNDGYKPFSDGSMPMEQAVQRGVAPFKTFMLKQTRETDLALFA
KISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTVFIPFLIIDMVVASVLMSMGMMMVSPSTVSLPFKLMLFVLVDG
WQLLIGSLAQSFS
>Mature_253_residues
MKHAFLRHAARVAPVLILCLAPALAYAQANGLPAFNASPGPHGGTTYSLSVQTMLLLTMLSFLPAMLLMMTSFTRIIIVL
SLLRQALGTATTPPNQVLVGLAMFLTFFVMSPVLDRAYNDGYKPFSDGSMPMEQAVQRGVAPFKTFMLKQTRETDLALFA
KISKAAPMQGPEDVPLSLLVPAFVTSELKTGFQIGFTVFIPFLIIDMVVASVLMSMGMMMVSPSTVSLPFKLMLFVLVDG
WQLLIGSLAQSFS

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=247, Percent_Identity=63.1578947368421, Blast_Score=323, Evalue=9e-90,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27419; Mature: 27419

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]