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The map label for this gene is glgB [H]

Identifier: 116626375

GI number: 116626375

Start: 9209848

End: 9212022

Strand: Direct

Name: glgB [H]

Synonym: Acid_7335

Alternate gene names: 116626375

Gene position: 9209848-9212022 (Clockwise)

Preceding gene: 116626371

Following gene: 116626376

Centisome position: 92.42

GC content: 61.1

Gene sequence:

>2175_bases
ATGACTGGTGAAGAAATAGAAGCCATAGTCAATGGCTATCACGGGGACGCCTTCGGCATCCTGGGACCGCATTCGGTTCG
CAAGAAAAACGGCAATCCGCGCTGGGAAGTGCGCGCGTTCCTCCCGCAGGCGGATTCCGCCGTCGTGCTGGCTGGAACCA
CCCGCTACGATATGGAGAAGCGGCACACGCAAGGCTTCTTCGTCGCCGCCATGGATGGCGACTCCGTGCCTTACGTCATC
CGCGCGCGTCTCTGGGATGGCCGCGAGATCGAGATCGTCGACCCCTATCGCTTCGGCCCGCAGATCTCCGATTCCGATCT
CTACCTGCACACCGAGGGCACCCTCAACGAGGCCTGGCGTTCGCTCGGCGCCCACCTCGTCACCACCGAAGGCGCCTCCG
GCGTGCGCTTCGCCGTCTGGGCGCCCAACGCCGAGAACGTCACCGTCGCCGGCGAGTTCAACGATTGGGATGTCCGCCGC
CACCCCATGCGGCGCCGCAACGGCGGAGTCTGGGAGCTCTTCATCCCTGGGCTCACGCAGGGCACCGCCTACAAGTACAA
CATCCGTTCGCGCTTCGCCGGCTATCAGCAATTGAAAGCCGACCCGTACGCCTTCTATTGCGAACATCCCCCGAAATCCG
CCTCCGTGGTCTGGGGCCTCGACAACTATCAGTGGCAAGACCAGGAGTGGATGGAGACCCGCGCCGCGCACGACCTGCTG
AAATCGCCGATGGCGGTCTACGAGGTCCATCTCGGCAGCTGGATGCGCGGACCCATGGGCCAGGTGCTCACGTACCGCGA
TCTCGCCGTCAAACTGGTCGAGTACGTCAAGCAGATGGGCTACACCCATGTCGAACTGCTCCCGCCCATGGAGCACCCCT
TCAGCGGATCCTGGGGATATCAGATCATCGGCTACTTCGCCCCCACCTCGCGCTTCGGCACCCCAGACGATTTCAAGTTT
TTCATTGATGCCTTCCACCGCGCCGGCATCGGCGTCATCGTCGATTGGGTGCCCGCCCACTTCCCGAAAGATGCCCATGG
CCTGGTCTTCTTCGATGGCACCGCGCTCTACGAACATGCCGACCCGCGCAAAGGCGAGCAGCAGGATTGGGGAACGCTCG
TCTTCAACTACGGCCGCAACGAAGTCCGCACCTTTCTCATCTCCAACGCGCTTTTTTGGCTCAAGGAGATGCACATCGAT
GGCCTGCGCGTGGATGCCGTCGCTTCCATGCTCTACCTCGATTACTCGCGCAAGGCCGGCGAGTGGATCCCCAACCAGTA
CGGCGGGAACGAGAATCTCGAGGCCATCGATTTCCTCCGCCAGTTCAATGTGGTCGCTCACTCCGTGCCCGGCGCCTTCA
CGGTCGCCGAGGAATCCACCGCCTTCGCCGGCGTCTCCAAACCCGTCTACCTCAACGGCCTCGGCTTCACCATGAAGTGG
AACATGGGCTGGATGCACGACATGCTGGACTACTTCAGCAACGACCCCATCTATCGCAAGTACCACCACAACAGCATCAC
CTTCAGCCTGCTCTACGCCTTCACGGAAAATTTCGTCCTCCCCGTCTCCCACGACGAAGTGGTCCACGGCAAGGGTTCGC
TCTTAAATAAGATGCCTGGCGACGAGTGGCGCCAGTTCGCCAACGCCCGCGCCTTCCTTGCCTACATGTGGGTGCATCCC
GGCAAGAAACTGCTCTTCATGGGCCAGGAAATCGGACAGCGCGAAGAGTGGAATCACGATCAGGGTATCCGCTGGGAGCT
GCTTCAATTCGATCTCCACCGCCAGTTGCAGAGCCTGATGCGCGAGCTCAATCGCGTCTACAAGGCGAACCCCGCACTCT
ACGAAATCGACTTCCATTACACCGGCTTCGAATGGGTGGATTTCCACGATGGCGCCAACTCGATCATCGCTTTCCTGCGC
CGCGCCGAAGACCCGGACGATTTCATCCTCGTCTGCTGCAACTTCACTCCCGTTCCCCGCCAGGGCTACGAGTTCGGCGT
CCCCGAAGAAGGCTTCTATCAGGAGATCCTGAATACCGATTCGGAGTACTTCGGCGGCACCAACATGGGCAACGGCGGCT
GCCTCTCCAGCCGTCCCATCGCCAAACACAACCGCTCTCACTCGATCGCCGTGACCCTCCCCCCGCTCGCAGTGGTAGCC
TTCAAAAAATGTTAG

Upstream 100 bases:

>100_bases
TGCAGCGTTTCGGGTTCCACCGAGCCTTCCAGGTGAAGATGTAGTTCAGCCTTGGGCAATTCGAGCAGGAATAGTTCCAT
ACTATGAATCGTAGACTCTC

Downstream 100 bases:

>100_bases
CCGTCTTGTATCACCGTGCATTTGTCTTGGTATTACACTGCTCTTGTTTGCCCGAGGGCTGCAAACATCCGCGCCGGAAT
GTTCGCCGCCCCGTCAGAGC

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 724; Mature: 723

Protein sequence:

>724_residues
MTGEEIEAIVNGYHGDAFGILGPHSVRKKNGNPRWEVRAFLPQADSAVVLAGTTRYDMEKRHTQGFFVAAMDGDSVPYVI
RARLWDGREIEIVDPYRFGPQISDSDLYLHTEGTLNEAWRSLGAHLVTTEGASGVRFAVWAPNAENVTVAGEFNDWDVRR
HPMRRRNGGVWELFIPGLTQGTAYKYNIRSRFAGYQQLKADPYAFYCEHPPKSASVVWGLDNYQWQDQEWMETRAAHDLL
KSPMAVYEVHLGSWMRGPMGQVLTYRDLAVKLVEYVKQMGYTHVELLPPMEHPFSGSWGYQIIGYFAPTSRFGTPDDFKF
FIDAFHRAGIGVIVDWVPAHFPKDAHGLVFFDGTALYEHADPRKGEQQDWGTLVFNYGRNEVRTFLISNALFWLKEMHID
GLRVDAVASMLYLDYSRKAGEWIPNQYGGNENLEAIDFLRQFNVVAHSVPGAFTVAEESTAFAGVSKPVYLNGLGFTMKW
NMGWMHDMLDYFSNDPIYRKYHHNSITFSLLYAFTENFVLPVSHDEVVHGKGSLLNKMPGDEWRQFANARAFLAYMWVHP
GKKLLFMGQEIGQREEWNHDQGIRWELLQFDLHRQLQSLMRELNRVYKANPALYEIDFHYTGFEWVDFHDGANSIIAFLR
RAEDPDDFILVCCNFTPVPRQGYEFGVPEEGFYQEILNTDSEYFGGTNMGNGGCLSSRPIAKHNRSHSIAVTLPPLAVVA
FKKC

Sequences:

>Translated_724_residues
MTGEEIEAIVNGYHGDAFGILGPHSVRKKNGNPRWEVRAFLPQADSAVVLAGTTRYDMEKRHTQGFFVAAMDGDSVPYVI
RARLWDGREIEIVDPYRFGPQISDSDLYLHTEGTLNEAWRSLGAHLVTTEGASGVRFAVWAPNAENVTVAGEFNDWDVRR
HPMRRRNGGVWELFIPGLTQGTAYKYNIRSRFAGYQQLKADPYAFYCEHPPKSASVVWGLDNYQWQDQEWMETRAAHDLL
KSPMAVYEVHLGSWMRGPMGQVLTYRDLAVKLVEYVKQMGYTHVELLPPMEHPFSGSWGYQIIGYFAPTSRFGTPDDFKF
FIDAFHRAGIGVIVDWVPAHFPKDAHGLVFFDGTALYEHADPRKGEQQDWGTLVFNYGRNEVRTFLISNALFWLKEMHID
GLRVDAVASMLYLDYSRKAGEWIPNQYGGNENLEAIDFLRQFNVVAHSVPGAFTVAEESTAFAGVSKPVYLNGLGFTMKW
NMGWMHDMLDYFSNDPIYRKYHHNSITFSLLYAFTENFVLPVSHDEVVHGKGSLLNKMPGDEWRQFANARAFLAYMWVHP
GKKLLFMGQEIGQREEWNHDQGIRWELLQFDLHRQLQSLMRELNRVYKANPALYEIDFHYTGFEWVDFHDGANSIIAFLR
RAEDPDDFILVCCNFTPVPRQGYEFGVPEEGFYQEILNTDSEYFGGTNMGNGGCLSSRPIAKHNRSHSIAVTLPPLAVVA
FKKC
>Mature_723_residues
TGEEIEAIVNGYHGDAFGILGPHSVRKKNGNPRWEVRAFLPQADSAVVLAGTTRYDMEKRHTQGFFVAAMDGDSVPYVIR
ARLWDGREIEIVDPYRFGPQISDSDLYLHTEGTLNEAWRSLGAHLVTTEGASGVRFAVWAPNAENVTVAGEFNDWDVRRH
PMRRRNGGVWELFIPGLTQGTAYKYNIRSRFAGYQQLKADPYAFYCEHPPKSASVVWGLDNYQWQDQEWMETRAAHDLLK
SPMAVYEVHLGSWMRGPMGQVLTYRDLAVKLVEYVKQMGYTHVELLPPMEHPFSGSWGYQIIGYFAPTSRFGTPDDFKFF
IDAFHRAGIGVIVDWVPAHFPKDAHGLVFFDGTALYEHADPRKGEQQDWGTLVFNYGRNEVRTFLISNALFWLKEMHIDG
LRVDAVASMLYLDYSRKAGEWIPNQYGGNENLEAIDFLRQFNVVAHSVPGAFTVAEESTAFAGVSKPVYLNGLGFTMKWN
MGWMHDMLDYFSNDPIYRKYHHNSITFSLLYAFTENFVLPVSHDEVVHGKGSLLNKMPGDEWRQFANARAFLAYMWVHPG
KKLLFMGQEIGQREEWNHDQGIRWELLQFDLHRQLQSLMRELNRVYKANPALYEIDFHYTGFEWVDFHDGANSIIAFLRR
AEDPDDFILVCCNFTPVPRQGYEFGVPEEGFYQEILNTDSEYFGGTNMGNGGCLSSRPIAKHNRSHSIAVTLPPLAVVAF
KKC

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=661, Percent_Identity=26.3237518910741, Blast_Score=184, Evalue=2e-46,
Organism=Escherichia coli, GI1789839, Length=723, Percent_Identity=51.5905947441217, Blast_Score=734, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=682, Percent_Identity=24.9266862170088, Blast_Score=180, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI32564391, Length=608, Percent_Identity=24.6710526315789, Blast_Score=160, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320826, Length=668, Percent_Identity=25.8982035928144, Blast_Score=171, Evalue=4e-43,
Organism=Drosophila melanogaster, GI28573410, Length=641, Percent_Identity=28.7051482059282, Blast_Score=213, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 82805; Mature: 82674

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEEIEAIVNGYHGDAFGILGPHSVRKKNGNPRWEVRAFLPQADSAVVLAGTTRYDMEK
CCHHHHHHHHCCCCCCEEECCCCHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHH
RHTQGFFVAAMDGDSVPYVIRARLWDGREIEIVDPYRFGPQISDSDLYLHTEGTLNEAWR
HCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHH
SLGAHLVTTEGASGVRFAVWAPNAENVTVAGEFNDWDVRRHPMRRRNGGVWELFIPGLTQ
HCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEECCCCC
GTAYKYNIRSRFAGYQQLKADPYAFYCEHPPKSASVVWGLDNYQWQDQEWMETRAAHDLL
CCEEEEEHHHHHCCHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
KSPMAVYEVHLGSWMRGPMGQVLTYRDLAVKLVEYVKQMGYTHVELLPPMEHPFSGSWGY
HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCE
QIIGYFAPTSRFGTPDDFKFFIDAFHRAGIGVIVDWVPAHFPKDAHGLVFFDGTALYEHA
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCEEECCC
DPRKGEQQDWGTLVFNYGRNEVRTFLISNALFWLKEMHIDGLRVDAVASMLYLDYSRKAG
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCC
EWIPNQYGGNENLEAIDFLRQFNVVAHSVPGAFTVAEESTAFAGVSKPVYLNGLGFTMKW
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCEEEECCCEEEEE
NMGWMHDMLDYFSNDPIYRKYHHNSITFSLLYAFTENFVLPVSHDEVVHGKGSLLNKMPG
CCCHHHHHHHHHCCCCEEEEEECCCEEEEEEEEHHCCCEEECCCCCEECCCCHHHHCCCC
DEWRQFANARAFLAYMWVHPGKKLLFMGQEIGQREEWNHDQGIRWELLQFDLHRQLQSLM
HHHHHHHCHHEEEEEEEECCCCEEEEECHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHH
RELNRVYKANPALYEIDFHYTGFEWVDFHDGANSIIAFLRRAEDPDDFILVCCNFTPVPR
HHHHHHHHCCCCEEEEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC
QGYEFGVPEEGFYQEILNTDSEYFGGTNMGNGGCLSSRPIAKHNRSHSIAVTLPPLAVVA
CCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCEEEEE
FKKC
EECC
>Mature Secondary Structure 
TGEEIEAIVNGYHGDAFGILGPHSVRKKNGNPRWEVRAFLPQADSAVVLAGTTRYDMEK
CHHHHHHHHCCCCCCEEECCCCHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHH
RHTQGFFVAAMDGDSVPYVIRARLWDGREIEIVDPYRFGPQISDSDLYLHTEGTLNEAWR
HCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEECCCHHHHHH
SLGAHLVTTEGASGVRFAVWAPNAENVTVAGEFNDWDVRRHPMRRRNGGVWELFIPGLTQ
HCCCEEEEECCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEEECCCCC
GTAYKYNIRSRFAGYQQLKADPYAFYCEHPPKSASVVWGLDNYQWQDQEWMETRAAHDLL
CCEEEEEHHHHHCCHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
KSPMAVYEVHLGSWMRGPMGQVLTYRDLAVKLVEYVKQMGYTHVELLPPMEHPFSGSWGY
HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCE
QIIGYFAPTSRFGTPDDFKFFIDAFHRAGIGVIVDWVPAHFPKDAHGLVFFDGTALYEHA
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCEEECCC
DPRKGEQQDWGTLVFNYGRNEVRTFLISNALFWLKEMHIDGLRVDAVASMLYLDYSRKAG
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCC
EWIPNQYGGNENLEAIDFLRQFNVVAHSVPGAFTVAEESTAFAGVSKPVYLNGLGFTMKW
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCEEEECCCEEEEE
NMGWMHDMLDYFSNDPIYRKYHHNSITFSLLYAFTENFVLPVSHDEVVHGKGSLLNKMPG
CCCHHHHHHHHHCCCCEEEEEECCCEEEEEEEEHHCCCEEECCCCCEECCCCHHHHCCCC
DEWRQFANARAFLAYMWVHPGKKLLFMGQEIGQREEWNHDQGIRWELLQFDLHRQLQSLM
HHHHHHHCHHEEEEEEEECCCCEEEEECHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHH
RELNRVYKANPALYEIDFHYTGFEWVDFHDGANSIIAFLRRAEDPDDFILVCCNFTPVPR
HHHHHHHHCCCCEEEEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCC
QGYEFGVPEEGFYQEILNTDSEYFGGTNMGNGGCLSSRPIAKHNRSHSIAVTLPPLAVVA
CCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCEEEEE
FKKC
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA