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The map label for this gene is 116626376

Identifier: 116626376

GI number: 116626376

Start: 9212282

End: 9213859

Strand: Direct

Name: 116626376

Synonym: Acid_7336

Alternate gene names: NA

Gene position: 9212282-9213859 (Clockwise)

Preceding gene: 116626375

Following gene: 116626377

Centisome position: 92.44

GC content: 66.6

Gene sequence:

>1578_bases
ATGCCTAAGTACGATTCCATCATCGTCGGCGGCGGCCACAACGGGCTCGTCACCGCCGCCTACCTTGCGCGCGCCGGACG
CAAGGTGCTGGTGCTCGAACGCCGCGAACTGGTCGGCGGCTGTGCCGTCACCGAAGAGATCTGGCCCGGATACCGCGTCT
CCACCGGCGCCTATCTCACCAGCCTCATGCAGGAGCGCATCGTCAACGAGCTCGACCTGCCGCGCTTCGGCTACCAGGTG
GACGCCAAAGACCCCGCCTTCTTCTCCGCCTTCCCCGACGGCCGCCATCTCTTCATGTGGCAGGACCGCACCCGCACTCT
CGCCGAAATCGCGAAGTTCTCCACCCACGATGCCAACGTCTACCCCGCGTACGAAGATCAGTTGGAGCGCATCTCGCAGG
TAGTCGAAGGTCTCCTCCTCACTACTCCCCCGCCCTTCCCGCCGCGCGCTGTGGACCTGGTGGACTATCTCCGACTGATG
GGCAAGATGCGCGGCCTCAACGCCCGCGACATCGTCGCCCTCGTCAAGGTCTTCACGCAAAGCGCCTCCGAATTCCTCGA
TGAGTGGTTCGAATCCGAGCAAGTGAAAGTCACGCTCGCCACCGATGGCGTCATTGGCGCCAACGGCGGCCCGCGCTCCC
CCGGGACCGCCTACATCCTACTCCATCACTGCATGGGCGGCGTCGCCGGACACCGCGGACTCTGGGGCTTCGTCCGCGGC
GGCATGGGCGCCGTCTCCGAATCCATCGCGTCCGCGGCTCGCGCCAAGGGCGTCGAGATCCGCACCAACGCGACGGTCGC
CAAAGTGATGATCCGCGGCGGACGCGCTCGCGGCGTCGTGCTCGAAGGCGGCGAGGAGATCGAGTCCACCACCGTCGCCT
CCAACCTTGACCCCAAGCTGACGTTTCTCCGCCTGCTCGACCCCGGCGACCTGCCCGCCGATTTCGTCGAGTCCATCCGC
AACTTCCGCATCGAAGGCACCAGCTGCAAGATCAACCTCGCGCTCAACGGCCTCCCCGAGTTCACCGCCTATCCCGGCGC
CCCCGGCCCGCACCACAAAGCGACGATGCACATCTGCCCCAGCATCGAATACGTCGAACGCGCCTGGGACGACGCCAAGT
ATGGCCGCGCCTCCGAGCGCCCCCTGCTCGAGCTCACCATCCCCACGATGTACGACCCTTCGCTCGCTCCGCCCGGCAAG
CACATCATGGGCATCTTCCTCCAGTACGCGCCCTACACCCTGCGCGAGGGCACGTGGGACGACCTGCGCGAACCCTTCGG
CGACCGCGTCATCGGTCTCATCGAAGAGTACGTCCCCAACATCCGCGCCATCATCGATCACCGCGAGGTGCTCAGTCCGC
TCGATCTCGAACGCCGCTTCGGCATCACCGGCGGCAACATCTTCCACGGCGAAATGTCGCTCGACCAGATGTTCGTCATG
CGCCCCGTCGCCGGTTTTGCGCGCTACCGTACCCCCGTTCCCGGTCTCTTCCTCTGCGGCTCCGGCGCCCACCCCGGCGG
CGGCGTCATGGGCGCCCCCGGCTACAACTGCGCCCGCGAAATGCAGCGCACCCGCTAG

Upstream 100 bases:

>100_bases
TGCCTGCAGCCGGCTTTCAGCCGGCTCGCCCCGTTGCATGCGGCTCACCCTCATCCCGATCGCTCCCTCACGGTCGCGGC
TCGTTGGGAGCAATTTAAAG

Downstream 100 bases:

>100_bases
GTGGGGCCTCCTGGCCGGGCCACTTGCTGCCTTGACGATCCTTTTTCAACGTTGTATTACTGTGCATTTGTCTGCTCGCA
GGCCGCAAACATCCGCACCG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MPKYDSIIVGGGHNGLVTAAYLARAGRKVLVLERRELVGGCAVTEEIWPGYRVSTGAYLTSLMQERIVNELDLPRFGYQV
DAKDPAFFSAFPDGRHLFMWQDRTRTLAEIAKFSTHDANVYPAYEDQLERISQVVEGLLLTTPPPFPPRAVDLVDYLRLM
GKMRGLNARDIVALVKVFTQSASEFLDEWFESEQVKVTLATDGVIGANGGPRSPGTAYILLHHCMGGVAGHRGLWGFVRG
GMGAVSESIASAARAKGVEIRTNATVAKVMIRGGRARGVVLEGGEEIESTTVASNLDPKLTFLRLLDPGDLPADFVESIR
NFRIEGTSCKINLALNGLPEFTAYPGAPGPHHKATMHICPSIEYVERAWDDAKYGRASERPLLELTIPTMYDPSLAPPGK
HIMGIFLQYAPYTLREGTWDDLREPFGDRVIGLIEEYVPNIRAIIDHREVLSPLDLERRFGITGGNIFHGEMSLDQMFVM
RPVAGFARYRTPVPGLFLCGSGAHPGGGVMGAPGYNCAREMQRTR

Sequences:

>Translated_525_residues
MPKYDSIIVGGGHNGLVTAAYLARAGRKVLVLERRELVGGCAVTEEIWPGYRVSTGAYLTSLMQERIVNELDLPRFGYQV
DAKDPAFFSAFPDGRHLFMWQDRTRTLAEIAKFSTHDANVYPAYEDQLERISQVVEGLLLTTPPPFPPRAVDLVDYLRLM
GKMRGLNARDIVALVKVFTQSASEFLDEWFESEQVKVTLATDGVIGANGGPRSPGTAYILLHHCMGGVAGHRGLWGFVRG
GMGAVSESIASAARAKGVEIRTNATVAKVMIRGGRARGVVLEGGEEIESTTVASNLDPKLTFLRLLDPGDLPADFVESIR
NFRIEGTSCKINLALNGLPEFTAYPGAPGPHHKATMHICPSIEYVERAWDDAKYGRASERPLLELTIPTMYDPSLAPPGK
HIMGIFLQYAPYTLREGTWDDLREPFGDRVIGLIEEYVPNIRAIIDHREVLSPLDLERRFGITGGNIFHGEMSLDQMFVM
RPVAGFARYRTPVPGLFLCGSGAHPGGGVMGAPGYNCAREMQRTR
>Mature_524_residues
PKYDSIIVGGGHNGLVTAAYLARAGRKVLVLERRELVGGCAVTEEIWPGYRVSTGAYLTSLMQERIVNELDLPRFGYQVD
AKDPAFFSAFPDGRHLFMWQDRTRTLAEIAKFSTHDANVYPAYEDQLERISQVVEGLLLTTPPPFPPRAVDLVDYLRLMG
KMRGLNARDIVALVKVFTQSASEFLDEWFESEQVKVTLATDGVIGANGGPRSPGTAYILLHHCMGGVAGHRGLWGFVRGG
MGAVSESIASAARAKGVEIRTNATVAKVMIRGGRARGVVLEGGEEIESTTVASNLDPKLTFLRLLDPGDLPADFVESIRN
FRIEGTSCKINLALNGLPEFTAYPGAPGPHHKATMHICPSIEYVERAWDDAKYGRASERPLLELTIPTMYDPSLAPPGKH
IMGIFLQYAPYTLREGTWDDLREPFGDRVIGLIEEYVPNIRAIIDHREVLSPLDLERRFGITGGNIFHGEMSLDQMFVMR
PVAGFARYRTPVPGLFLCGSGAHPGGGVMGAPGYNCAREMQRTR

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=547, Percent_Identity=43.5100548446069, Blast_Score=444, Evalue=1e-124,
Organism=Caenorhabditis elegans, GI17540238, Length=519, Percent_Identity=42.9672447013487, Blast_Score=434, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57677; Mature: 57546

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKYDSIIVGGGHNGLVTAAYLARAGRKVLVLERRELVGGCAVTEEIWPGYRVSTGAYLT
CCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHCCCCEECHHHHHH
SLMQERIVNELDLPRFGYQVDAKDPAFFSAFPDGRHLFMWQDRTRTLAEIAKFSTHDANV
HHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCC
YPAYEDQLERISQVVEGLLLTTPPPFPPRAVDLVDYLRLMGKMRGLNARDIVALVKVFTQ
CCCHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SASEFLDEWFESEQVKVTLATDGVIGANGGPRSPGTAYILLHHCMGGVAGHRGLWGFVRG
HHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHC
GMGAVSESIASAARAKGVEIRTNATVAKVMIRGGRARGVVLEGGEEIESTTVASNLDPKL
CHHHHHHHHHHHHHHCCCEEECCCCEEHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCE
TFLRLLDPGDLPADFVESIRNFRIEGTSCKINLALNGLPEFTAYPGAPGPHHKATMHICP
EEEEEECCCCCCHHHHHHHHCCEECCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECC
SIEYVERAWDDAKYGRASERPLLELTIPTMYDPSLAPPGKHIMGIFLQYAPYTLREGTWD
CHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
DLREPFGDRVIGLIEEYVPNIRAIIDHREVLSPLDLERRFGITGGNIFHGEMSLDQMFVM
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHCCCCCCCEEECCCCHHHHHHH
RPVAGFARYRTPVPGLFLCGSGAHPGGGVMGAPGYNCAREMQRTR
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PKYDSIIVGGGHNGLVTAAYLARAGRKVLVLERRELVGGCAVTEEIWPGYRVSTGAYLT
CCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHCCCCEECHHHHHH
SLMQERIVNELDLPRFGYQVDAKDPAFFSAFPDGRHLFMWQDRTRTLAEIAKFSTHDANV
HHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCC
YPAYEDQLERISQVVEGLLLTTPPPFPPRAVDLVDYLRLMGKMRGLNARDIVALVKVFTQ
CCCHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SASEFLDEWFESEQVKVTLATDGVIGANGGPRSPGTAYILLHHCMGGVAGHRGLWGFVRG
HHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHC
GMGAVSESIASAARAKGVEIRTNATVAKVMIRGGRARGVVLEGGEEIESTTVASNLDPKL
CHHHHHHHHHHHHHHCCCEEECCCCEEHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCE
TFLRLLDPGDLPADFVESIRNFRIEGTSCKINLALNGLPEFTAYPGAPGPHHKATMHICP
EEEEEECCCCCCHHHHHHHHCCEECCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECC
SIEYVERAWDDAKYGRASERPLLELTIPTMYDPSLAPPGKHIMGIFLQYAPYTLREGTWD
CHHHHHHHCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHH
DLREPFGDRVIGLIEEYVPNIRAIIDHREVLSPLDLERRFGITGGNIFHGEMSLDQMFVM
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHCCCCCCCEEECCCCHHHHHHH
RPVAGFARYRTPVPGLFLCGSGAHPGGGVMGAPGYNCAREMQRTR
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]