| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116626099
Identifier: 116626099
GI number: 116626099
Start: 8874345
End: 8875493
Strand: Reverse
Name: 116626099
Synonym: Acid_7057
Alternate gene names: NA
Gene position: 8875493-8874345 (Counterclockwise)
Preceding gene: 116626100
Following gene: 116626098
Centisome position: 89.06
GC content: 66.14
Gene sequence:
>1149_bases TTGCCAAGTACTTTGTGTGAGGACATGGCGCGCCAGGTCCTGGAGCAGTGCATCGCGGGCGCGGCGCCCGAGCGGCTGCC GCAAGCGCTGCTCGAGGAGCCGTGCGCCAAAGCGCTCTTCGGAATCCTGGTGGAAGGTCTCTCCGACCGCTTCGAGCCCG CGCTCGCGAATTGCTATGCGAGGCTATTCTCGCTGGCGATTCCGGGGGCCGACCTGGCGCACTACGAACGCGTGCGCGTG ACGCGCCGCGTCGAAGGCGAACCAGCGCGCGTCATCGTGCTCTCGCGGGTCACGCTGGGTGCGGATGTCGCGGTGACCAG CGTCTTAATCGATGCCGCCAAACGCCGCTTTCCCAACGCGCAGATCGTCTTCGCCGGACCACGCAAGAATTTCGAAATTT TCGCCGCCGATCCACGCCTGACCCACGCCCCAGTCGAATACCGGCGCGGCAGCCTGGCAGAGCGCGTTGCAGTCTGGCCC GGTTTGAAAACGCTCGCGGCTGGCACAGACACCGTCGTGATCGACGCCGATTCACGGCTCACGCAGCTTGGCCTGCTCCC CGTCGGCGATCCTTCGCGCTACCACCTTTTCGATAGCCGCTCCTATGGCGGCGCAAGCAACGCGTCGTTGCCCAACCTGG CCGCGCAATGGGCGGAGGAGACCTTCGGCGTCGCAGGCGCAAAACCGTACGTCGCGCCGGTTGGAAAGATCAGCGATCTG CCGCGCAACTATATCGCCATCAGTCTCGGCGTCGGCGAGAACCCCGCCAAACGCATCGCCGATCCCTTCGAGCCAGAACT CCTGCGTTACCTTGCGACGGTCGCGCCCCTGGTCATCGACAAAGGCGCGGGCGGCGAAGAAGCCGCACGCGTGCAGCGCG CCGCAGGCAGCGCCGCGAGTTTCTGGGAAGGCTCGTTCGCCGGCTTCGCGAAGATCATCGCGGGAGCCTCACTCTACGTC GGCTACGATTCCGCCGGCCAGCACGTCGCCGCCGCCTGCGGAATCCCGTTGATCAGCATCTTCGCCGGATTCCCCGTCCC CCGCATGTTCGACCGCTGGCGTCCGAAAGGCACCGCCATCCGCGTCGACAACCCCGACCCAGCGGAGGTTCTCGCGCGCG TCCGCGCAGCCACGAATACACTCGAATAA
Upstream 100 bases:
>100_bases CACGCGCGGAGTTGCAAATGCGGGTCGGCGCTCGCCCACGCGATCCTCACCGATCGCGGAGCAGTACCCGAGGCCACCAA GCAGAAGCTGGGGATCTTGA
Downstream 100 bases:
>100_bases GACACTCCGTGTTCCCTTTATTTATCTGCGCTTATCTGCGGCCCATTCTGCTTCAAGAAGACCGCGGAAAAAGCGTGGCC CGTTTAAAATAAAATCTTGG
Product: ADP-heptose:LPS heptosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MPSTLCEDMARQVLEQCIAGAAPERLPQALLEEPCAKALFGILVEGLSDRFEPALANCYARLFSLAIPGADLAHYERVRV TRRVEGEPARVIVLSRVTLGADVAVTSVLIDAAKRRFPNAQIVFAGPRKNFEIFAADPRLTHAPVEYRRGSLAERVAVWP GLKTLAAGTDTVVIDADSRLTQLGLLPVGDPSRYHLFDSRSYGGASNASLPNLAAQWAEETFGVAGAKPYVAPVGKISDL PRNYIAISLGVGENPAKRIADPFEPELLRYLATVAPLVIDKGAGGEEAARVQRAAGSAASFWEGSFAGFAKIIAGASLYV GYDSAGQHVAAACGIPLISIFAGFPVPRMFDRWRPKGTAIRVDNPDPAEVLARVRAATNTLE
Sequences:
>Translated_382_residues MPSTLCEDMARQVLEQCIAGAAPERLPQALLEEPCAKALFGILVEGLSDRFEPALANCYARLFSLAIPGADLAHYERVRV TRRVEGEPARVIVLSRVTLGADVAVTSVLIDAAKRRFPNAQIVFAGPRKNFEIFAADPRLTHAPVEYRRGSLAERVAVWP GLKTLAAGTDTVVIDADSRLTQLGLLPVGDPSRYHLFDSRSYGGASNASLPNLAAQWAEETFGVAGAKPYVAPVGKISDL PRNYIAISLGVGENPAKRIADPFEPELLRYLATVAPLVIDKGAGGEEAARVQRAAGSAASFWEGSFAGFAKIIAGASLYV GYDSAGQHVAAACGIPLISIFAGFPVPRMFDRWRPKGTAIRVDNPDPAEVLARVRAATNTLE >Mature_381_residues PSTLCEDMARQVLEQCIAGAAPERLPQALLEEPCAKALFGILVEGLSDRFEPALANCYARLFSLAIPGADLAHYERVRVT RRVEGEPARVIVLSRVTLGADVAVTSVLIDAAKRRFPNAQIVFAGPRKNFEIFAADPRLTHAPVEYRRGSLAERVAVWPG LKTLAAGTDTVVIDADSRLTQLGLLPVGDPSRYHLFDSRSYGGASNASLPNLAAQWAEETFGVAGAKPYVAPVGKISDLP RNYIAISLGVGENPAKRIADPFEPELLRYLATVAPLVIDKGAGGEEAARVQRAAGSAASFWEGSFAGFAKIIAGASLYVG YDSAGQHVAAACGIPLISIFAGFPVPRMFDRWRPKGTAIRVDNPDPAEVLARVRAATNTLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40773; Mature: 40642
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTLCEDMARQVLEQCIAGAAPERLPQALLEEPCAKALFGILVEGLSDRFEPALANCYA CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RLFSLAIPGADLAHYERVRVTRRVEGEPARVIVLSRVTLGADVAVTSVLIDAAKRRFPNA HHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCC QIVFAGPRKNFEIFAADPRLTHAPVEYRRGSLAERVAVWPGLKTLAAGTDTVVIDADSRL EEEEECCCCCCEEEECCCCCCCCCHHHHCCHHHHHHHHCCCHHHHHCCCCEEEEECCCCC TQLGLLPVGDPSRYHLFDSRSYGGASNASLPNLAAQWAEETFGVAGAKPYVAPVGKISDL HHCCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHC PRNYIAISLGVGENPAKRIADPFEPELLRYLATVAPLVIDKGAGGEEAARVQRAAGSAAS CCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHH FWEGSFAGFAKIIAGASLYVGYDSAGQHVAAACGIPLISIFAGFPVPRMFDRWRPKGTAI HCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCHHHHHHHHCCCCHHHHHHCCCCCCEE RVDNPDPAEVLARVRAATNTLE EECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PSTLCEDMARQVLEQCIAGAAPERLPQALLEEPCAKALFGILVEGLSDRFEPALANCYA CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH RLFSLAIPGADLAHYERVRVTRRVEGEPARVIVLSRVTLGADVAVTSVLIDAAKRRFPNA HHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCC QIVFAGPRKNFEIFAADPRLTHAPVEYRRGSLAERVAVWPGLKTLAAGTDTVVIDADSRL EEEEECCCCCCEEEECCCCCCCCCHHHHCCHHHHHHHHCCCHHHHHCCCCEEEEECCCCC TQLGLLPVGDPSRYHLFDSRSYGGASNASLPNLAAQWAEETFGVAGAKPYVAPVGKISDL HHCCCEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHC PRNYIAISLGVGENPAKRIADPFEPELLRYLATVAPLVIDKGAGGEEAARVQRAAGSAAS CCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHH FWEGSFAGFAKIIAGASLYVGYDSAGQHVAAACGIPLISIFAGFPVPRMFDRWRPKGTAI HCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCHHHHHHHHCCCCHHHHHHCCCCCCEE RVDNPDPAEVLARVRAATNTLE EECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA