| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is moxJ [H]
Identifier: 116625953
GI number: 116625953
Start: 8681571
End: 8682413
Strand: Reverse
Name: moxJ [H]
Synonym: Acid_6911
Alternate gene names: 116625953
Gene position: 8682413-8681571 (Counterclockwise)
Preceding gene: 116625954
Following gene: 116625952
Centisome position: 87.12
GC content: 55.4
Gene sequence:
>843_bases ATGTTTTCGCACTCCCTTAGCGTCATGTTTGTCTGGTTAGCTTTGGTCGGGCGCTGCTCCGCGGCCGACGCGCAGTTATT GCGCGTCTGCGCAGATCCGAATAACCTTCCATTTTCGAATCAGCGCGGCGAAGGACTGGAGAATAAACTTGCGCAGATCT TGTCGGATGATCTTTCCGCCGAGCTGAAATACGTCTGGTTTTCGGAACGCAAGAATTTCGTTAAGAATTCCCTCAATGCC GGCTTGTGCGACGTGGTACTCGGTGTGCCCGTCGATCTCGACGACGCGCTTGTCACCCGGCCGTACTACCGCTCGACCTA TGTCATGGTGACGAGAACGGCACGGTCCTTGCAGATCGAATCATTGTATGATCCGCAGCTCAAGGATTTGCGGATCGGTC TCCACGTTGTCGAAGATGACTATGCTCCACCGGGGCATCTGCTGGCAGCGCAAGGCCTGTCAAGAAACATTGTTGGCTAT AGCCTCTTTGGTACCTACGGCGCGCCGAATCCGCCGGCGCGCCTGATTGACGCGGTCTCCAAAGGCGATGTGGATGTCGC GATTGTATGGGGCCCATTCGCCGGATACTTCGCAAAGAAGGATTCGACTCCCCTTTCCATTAAACCGGTTTCCCCTATCC GATTCCAGATGATCCCATTTACTTACTCGATCGGTGTCGCAGTGCGTAAAGGGAACGACGCTCTGCGGTCCGCGATTCAG GCCGTGCTCGACCAAGAGTGTCCAAAGCTTCAAAAGCTCGTAACCGAGTACGGAGTTCCATCACCTCGGGAGGATGCCGT CTCATGCGCTACGTCGCCATCGGCTGCTGCCTTCTTACACTGA
Upstream 100 bases:
>100_bases GTCGCCGGCACGTTGAACCCAGTAGATGGAACCGGCGCTCTGGGATTTTTGAGCGCAATGGCCGACTTGCCCAACTACAC GAACACGGGAGGCATGCTCT
Downstream 100 bases:
>100_bases TTGCATGCAAGCGCGAACAACGCGATGTTCGTCCGTCACCGGCTGTCTCCGGTATTCTTGGCGACTCCGCCGGCGAGAGT GCGCTTCATCCTGGCGGTGG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MFSHSLSVMFVWLALVGRCSAADAQLLRVCADPNNLPFSNQRGEGLENKLAQILSDDLSAELKYVWFSERKNFVKNSLNA GLCDVVLGVPVDLDDALVTRPYYRSTYVMVTRTARSLQIESLYDPQLKDLRIGLHVVEDDYAPPGHLLAAQGLSRNIVGY SLFGTYGAPNPPARLIDAVSKGDVDVAIVWGPFAGYFAKKDSTPLSIKPVSPIRFQMIPFTYSIGVAVRKGNDALRSAIQ AVLDQECPKLQKLVTEYGVPSPREDAVSCATSPSAAAFLH
Sequences:
>Translated_280_residues MFSHSLSVMFVWLALVGRCSAADAQLLRVCADPNNLPFSNQRGEGLENKLAQILSDDLSAELKYVWFSERKNFVKNSLNA GLCDVVLGVPVDLDDALVTRPYYRSTYVMVTRTARSLQIESLYDPQLKDLRIGLHVVEDDYAPPGHLLAAQGLSRNIVGY SLFGTYGAPNPPARLIDAVSKGDVDVAIVWGPFAGYFAKKDSTPLSIKPVSPIRFQMIPFTYSIGVAVRKGNDALRSAIQ AVLDQECPKLQKLVTEYGVPSPREDAVSCATSPSAAAFLH >Mature_280_residues MFSHSLSVMFVWLALVGRCSAADAQLLRVCADPNNLPFSNQRGEGLENKLAQILSDDLSAELKYVWFSERKNFVKNSLNA GLCDVVLGVPVDLDDALVTRPYYRSTYVMVTRTARSLQIESLYDPQLKDLRIGLHVVEDDYAPPGHLLAAQGLSRNIVGY SLFGTYGAPNPPARLIDAVSKGDVDVAIVWGPFAGYFAKKDSTPLSIKPVSPIRFQMIPFTYSIGVAVRKGNDALRSAIQ AVLDQECPKLQKLVTEYGVPSPREDAVSCATSPSAAAFLH
Specific function: May be involved in the assemblage of active methanol dehydrogenase and/or its cofactor PQQ in the periplasm [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022455 - InterPro: IPR001638 - InterPro: IPR006311 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30579; Mature: 30579
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSHSLSVMFVWLALVGRCSAADAQLLRVCADPNNLPFSNQRGEGLENKLAQILSDDLSA CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ELKYVWFSERKNFVKNSLNAGLCDVVLGVPVDLDDALVTRPYYRSTYVMVTRTARSLQIE EEEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEH SLYDPQLKDLRIGLHVVEDDYAPPGHLLAAQGLSRNIVGYSLFGTYGAPNPPARLIDAVS HCCCCCHHHEEEEEEEEECCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHC KGDVDVAIVWGPFAGYFAKKDSTPLSIKPVSPIRFQMIPFTYSIGVAVRKGNDALRSAIQ CCCEEEEEEECCCCCHHHCCCCCCEEEECCCCCEEEEECEEEEEEEEEECCCHHHHHHHH AVLDQECPKLQKLVTEYGVPSPREDAVSCATSPSAAAFLH HHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFSHSLSVMFVWLALVGRCSAADAQLLRVCADPNNLPFSNQRGEGLENKLAQILSDDLSA CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC ELKYVWFSERKNFVKNSLNAGLCDVVLGVPVDLDDALVTRPYYRSTYVMVTRTARSLQIE EEEEEEHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEH SLYDPQLKDLRIGLHVVEDDYAPPGHLLAAQGLSRNIVGYSLFGTYGAPNPPARLIDAVS HCCCCCHHHEEEEEEEEECCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHC KGDVDVAIVWGPFAGYFAKKDSTPLSIKPVSPIRFQMIPFTYSIGVAVRKGNDALRSAIQ CCCEEEEEEECCCCCHHHCCCCCCEEEECCCCCEEEEECEEEEEEEEEECCCHHHHHHHH AVLDQECPKLQKLVTEYGVPSPREDAVSCATSPSAAAFLH HHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2116368 [H]