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The map label for this gene is 116625952

Identifier: 116625952

GI number: 116625952

Start: 8681083

End: 8681610

Strand: Reverse

Name: 116625952

Synonym: Acid_6910

Alternate gene names: NA

Gene position: 8681610-8681083 (Counterclockwise)

Preceding gene: 116625953

Following gene: 116625951

Centisome position: 87.12

GC content: 57.01

Gene sequence:

>528_bases
ATGCGCTACGTCGCCATCGGCTGCTGCCTTCTTACACTGATTGCATGCAAGCGCGAACAACGCGATGTTCGTCCGTCACC
GGCTGTCTCCGGTATTCTTGGCGACTCCGCCGGCGAGAGTGCGCTTCATCCTGGCGGTGGCGCCCAGACTCAGAATGTCC
ACAGTCCCTACGAGGGGAACGCATATGCGATCTCGGAGGGACAACGCCTCTATAACTGGTATAACTGCTCAGGTTGTCAC
GCCAATGGCGGTGGAGGCATCGGACCGCCTCTGATCAAGAAGGACCAGCGGGATTGGTTGTATGGCAGTGACCCTCCCAA
CATCTTCGACACGATCGTAAAGGGCCGGCCCAATGGAATGCCGACGTGGGGAGGAAAGATCCCGGAATATCAGATTTGGC
AGATTGTCACATACGTCCGATCGCTGAATAATCTGGAGCCGAAGGCTGCGACCCCTTCCCGTCCGGATACGCTCGAACAG
AAGACGGACACAATTCTTCCAGACAAAGGGGGAGCCAACCATCCATGA

Upstream 100 bases:

>100_bases
TGCGGTCCGCGATTCAGGCCGTGCTCGACCAAGAGTGTCCAAAGCTTCAAAAGCTCGTAACCGAGTACGGAGTTCCATCA
CCTCGGGAGGATGCCGTCTC

Downstream 100 bases:

>100_bases
ACCAGTCGATGTGGCACGCCTCCGGACCCAATGCTGCGTACGTTCGGGAACTCGGGATCTTCTTCGGCCTTCTACTGGGG
ATTATTTTTGTAATTGTTGT

Product: class I cytochrome c

Products: NA

Alternate protein names: Class I Cytochrome C; Cytochrome C Oxidase Protein Subunit III; Cytochrome C Oxidase Subunit III

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRYVAIGCCLLTLIACKREQRDVRPSPAVSGILGDSAGESALHPGGGAQTQNVHSPYEGNAYAISEGQRLYNWYNCSGCH
ANGGGGIGPPLIKKDQRDWLYGSDPPNIFDTIVKGRPNGMPTWGGKIPEYQIWQIVTYVRSLNNLEPKAATPSRPDTLEQ
KTDTILPDKGGANHP

Sequences:

>Translated_175_residues
MRYVAIGCCLLTLIACKREQRDVRPSPAVSGILGDSAGESALHPGGGAQTQNVHSPYEGNAYAISEGQRLYNWYNCSGCH
ANGGGGIGPPLIKKDQRDWLYGSDPPNIFDTIVKGRPNGMPTWGGKIPEYQIWQIVTYVRSLNNLEPKAATPSRPDTLEQ
KTDTILPDKGGANHP
>Mature_175_residues
MRYVAIGCCLLTLIACKREQRDVRPSPAVSGILGDSAGESALHPGGGAQTQNVHSPYEGNAYAISEGQRLYNWYNCSGCH
ANGGGGIGPPLIKKDQRDWLYGSDPPNIFDTIVKGRPNGMPTWGGKIPEYQIWQIVTYVRSLNNLEPKAATPSRPDTLEQ
KTDTILPDKGGANHP

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18931; Mature: 18931

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYVAIGCCLLTLIACKREQRDVRPSPAVSGILGDSAGESALHPGGGAQTQNVHSPYEGN
CCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AYAISEGQRLYNWYNCSGCHANGGGGIGPPLIKKDQRDWLYGSDPPNIFDTIVKGRPNGM
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PTWGGKIPEYQIWQIVTYVRSLNNLEPKAATPSRPDTLEQKTDTILPDKGGANHP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRYVAIGCCLLTLIACKREQRDVRPSPAVSGILGDSAGESALHPGGGAQTQNVHSPYEGN
CCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
AYAISEGQRLYNWYNCSGCHANGGGGIGPPLIKKDQRDWLYGSDPPNIFDTIVKGRPNGM
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PTWGGKIPEYQIWQIVTYVRSLNNLEPKAATPSRPDTLEQKTDTILPDKGGANHP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA