Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is 116625909

Identifier: 116625909

GI number: 116625909

Start: 8618533

End: 8619450

Strand: Reverse

Name: 116625909

Synonym: Acid_6865

Alternate gene names: NA

Gene position: 8619450-8618533 (Counterclockwise)

Preceding gene: 116625910

Following gene: 116625908

Centisome position: 86.49

GC content: 61.98

Gene sequence:

>918_bases
GTGAGTTTCCTCAACGGCAGTATACATCGCCATCAGCCGCAAGCCGAAAGGGAAACTGCGGCTCTGGCCGGGCCCTTGGG
TAGTTTCGAGTACTTTGGTTCAAGCCGCGTTGGCTCCGATCTGACTTCCGCCGACCATGACGCCTTGGAGTTGCGTTGGA
TCGATCCGGAGATGGCCCTGCGCGCCGGACTCCGCCGGGTGGACTCGCTCACTGGCAGCGAAATCGTCGGCAGCCGGGGC
GGCGGGGATTACTCTGGCATTCTCATTCCCTATTTCCACCCCGACTCCGATCAGGTGCGCGATTACCGCCTTCGCCGCGA
TCGTCCGGACCTGGAATACGATGCCGCCGGTAGCCTCAAGGCCAAGCGGAAATACCTCAGCCCTCCGGGCCGATCCAACA
TGCTTTATCTCCCGCCCCGAGTCAGTCAATCGCTTCTCGGCGATCCGAAGCTACCAGTCGTGATCACGGAAGGAGAGTTC
AAGACCCTCGCCCTGTGGCGCGCCGCCCACCATCGGGCTTTGAGTCGGCCTCGGTTTCTGCCGTTGGGCGTATCCGGTGT
CTACAACTGGCGGGGAACGATAGGCAAAGCGAACGCTTCCGACGGCAGCCGCATGGATGTAAAGGGAGCGATTCACGACC
TCGATTGGATCGTCTGGGCTGGGCGCCCGGTTGTGATCGCCTATGATGCCGATGCGGTCACCAAAGAACTGGTCCGCGTC
GCGCGGTCAGCACTGGCAGCCCATCTGCGCGGCCGCGGCGCCCTCGTAGGCTTCCTGGAAGGGATATCGAAAGGGGCAAG
GGGATCGACGACCATCTTGCAGCCGTGGGTCCCGACATGGTGCTCGACGAGATTGCACATGTCGATTTCGCGGGCTCGGT
ATGGAAGAAGGACTTACTGCGCTCCAAGCCGCCCATGA

Upstream 100 bases:

>100_bases
GAGGCGGGTGTGCAGCGGAGACGCTCGGCACATTGGCCGCGCAGAGGGGTCATCCAAAAGTGATGGAAGGCCGGAGGCCA
TCGTTTCAGAGGGGCGCAAT

Downstream 100 bases:

>100_bases
ACACTACGGAGGGTCGTATCTTGCCAGTCTTAGCAAATGCCATTGCCGCCTTCCGGCACGCGCCGGAATGGGGTGGAGTA
CTCGCCTTCAACGAGTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMALRAGLRRVDSLTGSEIVGSRG
GGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLKAKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEF
KTLALWRAAHHRALSRPRFLPLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV
ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYCAPSRP

Sequences:

>Translated_305_residues
MSFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMALRAGLRRVDSLTGSEIVGSRG
GGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLKAKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEF
KTLALWRAAHHRALSRPRFLPLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV
ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYCAPSRP
>Mature_304_residues
SFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMALRAGLRRVDSLTGSEIVGSRGG
GDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLKAKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEFK
TLALWRAAHHRALSRPRFLPLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRVA
RSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYCAPSRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33629; Mature: 33497

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMAL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHH
RAGLRRVDSLTGSEIVGSRGGGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLK
HHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHH
AKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEFKTLALWRAAHHRALSRPRFL
HHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE
PLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV
EECCCEEEECCCCCCCCCCCCCCEEEHHHHHHHCEEEEECCCEEEEEECCHHHHHHHHHH
ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYC
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCHHCHHHHEEHHHHHCCCCCCC
APSRP
CCCCC
>Mature Secondary Structure 
SFLNGSIHRHQPQAERETAALAGPLGSFEYFGSSRVGSDLTSADHDALELRWIDPEMAL
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECHHHHH
RAGLRRVDSLTGSEIVGSRGGGDYSGILIPYFHPDSDQVRDYRLRRDRPDLEYDAAGSLK
HHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHH
AKRKYLSPPGRSNMLYLPPRVSQSLLGDPKLPVVITEGEFKTLALWRAAHHRALSRPRFL
HHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEE
PLGVSGVYNWRGTIGKANASDGSRMDVKGAIHDLDWIVWAGRPVVIAYDADAVTKELVRV
EECCCEEEECCCCCCCCCCCCCCEEEHHHHHHHCEEEEECCCEEEEEECCHHHHHHHHHH
ARSALAAHLRGRGALVGFLEGISKGARGSTTILQPWVPTWCSTRLHMSISRARYGRRTYC
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEECCCCCCHHCHHHHEEHHHHHCCCCCCC
APSRP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA