Click here to switch to the map view.

The map label for this gene is 116625910

Identifier: 116625910

GI number: 116625910

Start: 8620732

End: 8621208

Strand: Reverse

Name: 116625910

Synonym: Acid_6867

Alternate gene names: NA

Gene position: 8621208-8620732 (Counterclockwise)

Preceding gene: 116625911

Following gene: 116625909

Centisome position: 86.51

GC content: 61.22

Gene sequence:

>477_bases
ATGGCCCGTCCAGCCCTTCGTATTAAAGTCACAAACAAAGATCAGAACGAACTGCGGAAATTGCTTGGCGGAGGGGTGCA
GCAGGTGCGAGTCGTCCTTCGGGCGGTGGCGCTTTCTCAACTGGCTGAGGGCGTCAGTGCTCCGCGGATCTCTTCTGTCA
TCCCGTTGACTCCACAAGCGATTCGCAACGTCGGTCATCGCTACGAGCAAGGCGGCCTCGAACGTGCCCTCTACGAGAAG
GGACGGCCGGGAGCGGCGGAAGTGCTGGATGATAGCCAGAAACAGCGCATCATCGCGATGGTGTGCAGCGAACCGCCTGA
GGGTCGTGCGCGCTGGACGGTGCGACTGGTGGTCGAAGAAGCCGTGAAGCGCCGACTGGTTCCGCGAGTGGGAAGAGAAA
CCGTCCGCGTCCTGCTCCTCCACCACGACCTCAAGCCGTGGCGGGAAAAAAATGTGGTGCGTGGCCGACCTCGATGA

Upstream 100 bases:

>100_bases
AATCCGCTTAAGTCCGCACCACCGCGCCAGTTCATTGACCGCCTGAAAATTTGCTAATAAAACAATTCTCTTCGGAAATG
TTTTGGCGCATACTTGGGGT

Downstream 100 bases:

>100_bases
AGAATATATCGATCATATTGAGGATACCCTCGAGACGTATGAGAGGCCATACGATCCGCGGGAACCAGTGGTGTGTCTGG
ATGAGAAGCCGGTTACGCTG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MARPALRIKVTNKDQNELRKLLGGGVQQVRVVLRAVALSQLAEGVSAPRISSVIPLTPQAIRNVGHRYEQGGLERALYEK
GRPGAAEVLDDSQKQRIIAMVCSEPPEGRARWTVRLVVEEAVKRRLVPRVGRETVRVLLLHHDLKPWREKNVVRGRPR

Sequences:

>Translated_158_residues
MARPALRIKVTNKDQNELRKLLGGGVQQVRVVLRAVALSQLAEGVSAPRISSVIPLTPQAIRNVGHRYEQGGLERALYEK
GRPGAAEVLDDSQKQRIIAMVCSEPPEGRARWTVRLVVEEAVKRRLVPRVGRETVRVLLLHHDLKPWREKNVVRGRPR
>Mature_157_residues
ARPALRIKVTNKDQNELRKLLGGGVQQVRVVLRAVALSQLAEGVSAPRISSVIPLTPQAIRNVGHRYEQGGLERALYEKG
RPGAAEVLDDSQKQRIIAMVCSEPPEGRARWTVRLVVEEAVKRRLVPRVGRETVRVLLLHHDLKPWREKNVVRGRPR

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17794; Mature: 17663

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPALRIKVTNKDQNELRKLLGGGVQQVRVVLRAVALSQLAEGVSAPRISSVIPLTPQA
CCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
IRNVGHRYEQGGLERALYEKGRPGAAEVLDDSQKQRIIAMVCSEPPEGRARWTVRLVVEE
HHHHHHHHHHCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHEECCCCCCCHHHHHHHHHHH
AVKRRLVPRVGRETVRVLLLHHDLKPWREKNVVRGRPR
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
ARPALRIKVTNKDQNELRKLLGGGVQQVRVVLRAVALSQLAEGVSAPRISSVIPLTPQA
CCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
IRNVGHRYEQGGLERALYEKGRPGAAEVLDDSQKQRIIAMVCSEPPEGRARWTVRLVVEE
HHHHHHHHHHCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHEECCCCCCCHHHHHHHHHHH
AVKRRLVPRVGRETVRVLLLHHDLKPWREKNVVRGRPR
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA