Click here to switch to the map view.

The map label for this gene is 116625908

Identifier: 116625908

GI number: 116625908

Start: 8617385

End: 8618536

Strand: Reverse

Name: 116625908

Synonym: Acid_6864

Alternate gene names: NA

Gene position: 8618536-8617385 (Counterclockwise)

Preceding gene: 116625909

Following gene: 116625904

Centisome position: 86.48

GC content: 62.15

Gene sequence:

>1152_bases
ATGAACACTACGGAGGGTCGTATCTTGCCAGTCTTAGCAAATGCCATTGCCGCCTTCCGGCACGCGCCGGAATGGGGTGG
AGTACTCGCCTTCAACGAGTTTGGGTTTGGGACGGTCGTCCTCAAGCCCGCCCCCTGGGGCGTCGTTCCCAAGGGGGAAT
GGACCGATCACGAGGATCGCTTGGCTGCGGAATGGCTGCAGCGACAGGGCATCCTGGTCTCCGTCGACATCGCCGGCCAA
GCAGTTCAGACTGCCGCTCGGGACCATCCATTTCACCCAGTGAAGTCCTATTTTCATGGTCTTTTCTGGGATGGAGTCGA
GCGCCTCGACCGCTGGTTGTCTACCTACCTGGGTGCCGAGGATACTGACTACTCGCGCGCCGTTGGATCGCGTTGGCTCA
TCTCGGCCGTTGCGCGGATCTTCCAGCCGGGGGCGAAAGCCGATTGCTGCCTGATTCTCGAAGGGCCGCAGGGCATCCGA
AAATCGACGGCACTGCGGACGATCGCCGGCGAGTACTTCACCGACGAACTGGCGGACTTGGGCAGTAAAGATGCAGCCAT
GCAGACGCGGGGAGTTTGGATCATCGAACTTTCCGAGTTGGACAATCTCAGCCATGCCGAGGTGGCGCGGATCAAGGCAT
TCATGAGCCGGACCACGGATCGCTTCCGCCCGCCCTACGGTATGCGCCTGGTGGAATCCCCCCGCCAGTGCGTCTTTGCC
GGCACCGTCAACCACGGCACCTACCTGCGCGACGAGACCGGAGGGCGCCGTTTCTGGCCGGTCGTCTGTGGGCGGATCGA
CGTTGAGGGTCTCGGCGAGGTCCGCGACCAGCTGTGGGCGGAAGCCAAAGCCAGATACGAATCGGGCAGCCCGTGGTGGC
TTGACACCCCAGAGTTGGTGCAACTGGCCAGCGATCAGCAGGAAGCGCGTTACGAAGGTGATCCGTGGGAAGAGGTGATT
GGACCTTGGCTGGAGTGCAAACAGAGCACGGCGATTTCGGAGGTCCTGTTGAGATGCATCGACAAGCCCCAGGCGCAGTG
GACGCAGACCGACAAGGTTCGTGCCGCGCGATGTCTCCGGACGCAAGGCTGGGTGCGGTACCGGGAACGTCAAGGAAACC
GGCTCGAATGGCGGTATCGGAGGGTCGTGTGA

Upstream 100 bases:

>100_bases
TCTTGCAGCCGTGGGTCCCGACATGGTGCTCGACGAGATTGCACATGTCGATTTCGCGGGCTCGGTATGGAAGAAGGACT
TACTGCGCTCCAAGCCGCCC

Downstream 100 bases:

>100_bases
AATGAAGATGTTCCCAGGGTTCCCAGCCCTGTTCCTAGCCATGTTCCCAGTCTTCCTCTGGATTATCCGTGTGTTCTCGA
TGTTCTGGATTTCCCGCCGT

Product: virulence-associated E family protein

Products: NA

Alternate protein names: Virulence-Associated Protein E; Helicase; Virulence-Associated E; DNA Primase Domain Protein; Phage-Like Protein; P-Loop ATPase And Inactivated Derivatives-Like Protein; Prophage Ps2 Protein; Prophage Lp3 Helicase; Phage Protein; Virulence-Associated Protein E Family Protein; Phage-Related Virulence-Associated Protein E; Primase C Terminal 2 Family; Pyocin R2_PP TraC Domain Protein; VirE N- Domain Protein; P-Loop ATPase And Inactivated Derivatives-Like; Virulence-Associated Protein E Domain-Containing Protein; DNA Primase Domain-Containing Protein; TraC Domain-Containing Protein; Phage Integrase Protein; APSE-2 Prophage; P-Loop ATPase And Inactivated Derivative; Imidazoleglycerol Phosphate Synthase; Virulence-Associated E Domain Protein

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MNTTEGRILPVLANAIAAFRHAPEWGGVLAFNEFGFGTVVLKPAPWGVVPKGEWTDHEDRLAAEWLQRQGILVSVDIAGQ
AVQTAARDHPFHPVKSYFHGLFWDGVERLDRWLSTYLGAEDTDYSRAVGSRWLISAVARIFQPGAKADCCLILEGPQGIR
KSTALRTIAGEYFTDELADLGSKDAAMQTRGVWIIELSELDNLSHAEVARIKAFMSRTTDRFRPPYGMRLVESPRQCVFA
GTVNHGTYLRDETGGRRFWPVVCGRIDVEGLGEVRDQLWAEAKARYESGSPWWLDTPELVQLASDQQEARYEGDPWEEVI
GPWLECKQSTAISEVLLRCIDKPQAQWTQTDKVRAARCLRTQGWVRYRERQGNRLEWRYRRVV

Sequences:

>Translated_383_residues
MNTTEGRILPVLANAIAAFRHAPEWGGVLAFNEFGFGTVVLKPAPWGVVPKGEWTDHEDRLAAEWLQRQGILVSVDIAGQ
AVQTAARDHPFHPVKSYFHGLFWDGVERLDRWLSTYLGAEDTDYSRAVGSRWLISAVARIFQPGAKADCCLILEGPQGIR
KSTALRTIAGEYFTDELADLGSKDAAMQTRGVWIIELSELDNLSHAEVARIKAFMSRTTDRFRPPYGMRLVESPRQCVFA
GTVNHGTYLRDETGGRRFWPVVCGRIDVEGLGEVRDQLWAEAKARYESGSPWWLDTPELVQLASDQQEARYEGDPWEEVI
GPWLECKQSTAISEVLLRCIDKPQAQWTQTDKVRAARCLRTQGWVRYRERQGNRLEWRYRRVV
>Mature_383_residues
MNTTEGRILPVLANAIAAFRHAPEWGGVLAFNEFGFGTVVLKPAPWGVVPKGEWTDHEDRLAAEWLQRQGILVSVDIAGQ
AVQTAARDHPFHPVKSYFHGLFWDGVERLDRWLSTYLGAEDTDYSRAVGSRWLISAVARIFQPGAKADCCLILEGPQGIR
KSTALRTIAGEYFTDELADLGSKDAAMQTRGVWIIELSELDNLSHAEVARIKAFMSRTTDRFRPPYGMRLVESPRQCVFA
GTVNHGTYLRDETGGRRFWPVVCGRIDVEGLGEVRDQLWAEAKARYESGSPWWLDTPELVQLASDQQEARYEGDPWEEVI
GPWLECKQSTAISEVLLRCIDKPQAQWTQTDKVRAARCLRTQGWVRYRERQGNRLEWRYRRVV

Specific function: Unknown

COG id: COG5545

COG function: function code R; Predicted P-loop ATPase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43506; Mature: 43506

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTEGRILPVLANAIAAFRHAPEWGGVLAFNEFGFGTVVLKPAPWGVVPKGEWTDHEDR
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHH
LAAEWLQRQGILVSVDIAGQAVQTAARDHPFHPVKSYFHGLFWDGVERLDRWLSTYLGAE
HHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DTDYSRAVGSRWLISAVARIFQPGAKADCCLILEGPQGIRKSTALRTIAGEYFTDELADL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
GSKDAAMQTRGVWIIELSELDNLSHAEVARIKAFMSRTTDRFRPPYGMRLVESPRQCVFA
CCCCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEE
GTVNHGTYLRDETGGRRFWPVVCGRIDVEGLGEVRDQLWAEAKARYESGSPWWLDTPELV
EECCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
QLASDQQEARYEGDPWEEVIGPWLECKQSTAISEVLLRCIDKPQAQWTQTDKVRAARCLR
HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHH
TQGWVRYRERQGNRLEWRYRRVV
HHHHHHHHHCCCCEEEEEEECCC
>Mature Secondary Structure
MNTTEGRILPVLANAIAAFRHAPEWGGVLAFNEFGFGTVVLKPAPWGVVPKGEWTDHEDR
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHH
LAAEWLQRQGILVSVDIAGQAVQTAARDHPFHPVKSYFHGLFWDGVERLDRWLSTYLGAE
HHHHHHHHCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DTDYSRAVGSRWLISAVARIFQPGAKADCCLILEGPQGIRKSTALRTIAGEYFTDELADL
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC
GSKDAAMQTRGVWIIELSELDNLSHAEVARIKAFMSRTTDRFRPPYGMRLVESPRQCVFA
CCCCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEE
GTVNHGTYLRDETGGRRFWPVVCGRIDVEGLGEVRDQLWAEAKARYESGSPWWLDTPELV
EECCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
QLASDQQEARYEGDPWEEVIGPWLECKQSTAISEVLLRCIDKPQAQWTQTDKVRAARCLR
HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHH
TQGWVRYRERQGNRLEWRYRRVV
HHHHHHHHHCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA