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The map label for this gene is 116625641

Identifier: 116625641

GI number: 116625641

Start: 8265854

End: 8267170

Strand: Reverse

Name: 116625641

Synonym: Acid_6590

Alternate gene names: NA

Gene position: 8267170-8265854 (Counterclockwise)

Preceding gene: 116625642

Following gene: 116625640

Centisome position: 82.96

GC content: 61.73

Gene sequence:

>1317_bases
ATGGACAAGACTTCAAGGCGTGATTTATTGAAGCTGGCGTCTCTGGCCGGAATCGGCGCTGGCCTCGCGCGCTCACAGGG
CTCATCCAAAAGTATGGCCGGAGTGAGCTTTAAGCCCAACGGGACCGTACGCATTGGCGTGATCGGCACCGGCGGCCGCG
GCGGCTCCCTGATCGAAAACTTCTCCGCCGTGGAAGGCGTCCAGATCACCGCCCTCTGCGACACCGTGAAGGATAAGGTC
CTCAAGCAGCAGGCCTGGCTCGATAAAGCCGGTAAGGCCTCGCACCCCATCGCCCTCTTCCACTCCGACGATCACGCCTT
TGAGAACCTCGTCAAGCGCGACGACGTGGATCTCGTGGTGGTCTCTACGCCGTGGGTCTGGCACACCCGGATGGCCGTGG
CCGCTATGAAGCAGGGCAAGCACGTTGCCGTGGAAGTGCCCGCTGCCCGCACCATCGACGAGTGCTGGGAGCTCGTCAAC
ACCAGCGAGGCCACCCAGCGCCATTGCATTCAGCTGGAGAACTGCTGCTACGGCTATAACGAAATGATGGTGCTCAACAT
GGTGCGCGCCGGCTTATTCGGCGAACTCACCCATGGCGGCGCCGCCTACAATCACGACCTGCGCAGCATACTCTTTTCCG
CCGAAGGCGAGGGCGAGTGGCGGCGTTTCGAACACCTCAACCGCGACGGCAATCTGTACCCCACGCACGGCCTCGGCCCG
GTCGCCCACTACATGGACGTGAACCGCGGCGACCGCTTCGACACGCTCGTCTCCATGAGTTCCATCTCCGCTTCGCTCCA
GCAATATCGAAAGGAGAAGATCCCCGCCGGCGATCCGCGCCAGAAAGAAGTCTACAAGGAGGGCGATTTCAACGTCAGCC
TGATCCGCACCGTCAAGGGCCGCGTCATCGAGCTCGAGCACAATGTGAGCAGCCCGCAGCCTTACGACCGGATCAACCTG
ATCGCCGGCACCAAGGGCATCTTCCGCGATTATCCGCCGCGCATCTATTTCGACGGCGCCAGGCGTGAAGACTTCGAGAC
GCTCGACCGCTACAAAGAAAAATACGAGCATCCGCTGTGGAAGAAAGTCGGCGAGCTCGCCAAGGAACTCGGCGGCCACG
GCGGCATGGATTTCGTGATGGCCTACCGGCTCATCCAGTGCATGAAGGAAGGCACGCCGCCGGATATAGATGTCTATGAT
GCGGCGGCCTGGAGCGCGCCCGGCCCCCTTAGTGAAGCCAGCGTCGCCAATGGCAGCGCGCCGCAAAAATTCCCCGATTT
CACCCGGGGCAAATGGCAAACCCGCCAGCCTGTTTAA

Upstream 100 bases:

>100_bases
TGGCCGCACCAACTACGCCCTTATACTTGGCGTCATTTTTGTGATCAGCGGCTCCATCGTAATTCAGGTGGTTAAGAAAC
TCTGGAAGTAGGAATAGAGA

Downstream 100 bases:

>100_bases
GGCATGTCAGCGTTTGTTGAAGCTCGTGATTTCCTGATCTCGAACCGCTGCGATTACGCAACGGCATATCGCGACTTCGT
CTTTCCGCGCCTGACGCATT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MDKTSRRDLLKLASLAGIGAGLARSQGSSKSMAGVSFKPNGTVRIGVIGTGGRGGSLIENFSAVEGVQITALCDTVKDKV
LKQQAWLDKAGKASHPIALFHSDDHAFENLVKRDDVDLVVVSTPWVWHTRMAVAAMKQGKHVAVEVPAARTIDECWELVN
TSEATQRHCIQLENCCYGYNEMMVLNMVRAGLFGELTHGGAAYNHDLRSILFSAEGEGEWRRFEHLNRDGNLYPTHGLGP
VAHYMDVNRGDRFDTLVSMSSISASLQQYRKEKIPAGDPRQKEVYKEGDFNVSLIRTVKGRVIELEHNVSSPQPYDRINL
IAGTKGIFRDYPPRIYFDGARREDFETLDRYKEKYEHPLWKKVGELAKELGGHGGMDFVMAYRLIQCMKEGTPPDIDVYD
AAAWSAPGPLSEASVANGSAPQKFPDFTRGKWQTRQPV

Sequences:

>Translated_438_residues
MDKTSRRDLLKLASLAGIGAGLARSQGSSKSMAGVSFKPNGTVRIGVIGTGGRGGSLIENFSAVEGVQITALCDTVKDKV
LKQQAWLDKAGKASHPIALFHSDDHAFENLVKRDDVDLVVVSTPWVWHTRMAVAAMKQGKHVAVEVPAARTIDECWELVN
TSEATQRHCIQLENCCYGYNEMMVLNMVRAGLFGELTHGGAAYNHDLRSILFSAEGEGEWRRFEHLNRDGNLYPTHGLGP
VAHYMDVNRGDRFDTLVSMSSISASLQQYRKEKIPAGDPRQKEVYKEGDFNVSLIRTVKGRVIELEHNVSSPQPYDRINL
IAGTKGIFRDYPPRIYFDGARREDFETLDRYKEKYEHPLWKKVGELAKELGGHGGMDFVMAYRLIQCMKEGTPPDIDVYD
AAAWSAPGPLSEASVANGSAPQKFPDFTRGKWQTRQPV
>Mature_438_residues
MDKTSRRDLLKLASLAGIGAGLARSQGSSKSMAGVSFKPNGTVRIGVIGTGGRGGSLIENFSAVEGVQITALCDTVKDKV
LKQQAWLDKAGKASHPIALFHSDDHAFENLVKRDDVDLVVVSTPWVWHTRMAVAAMKQGKHVAVEVPAARTIDECWELVN
TSEATQRHCIQLENCCYGYNEMMVLNMVRAGLFGELTHGGAAYNHDLRSILFSAEGEGEWRRFEHLNRDGNLYPTHGLGP
VAHYMDVNRGDRFDTLVSMSSISASLQQYRKEKIPAGDPRQKEVYKEGDFNVSLIRTVKGRVIELEHNVSSPQPYDRINL
IAGTKGIFRDYPPRIYFDGARREDFETLDRYKEKYEHPLWKKVGELAKELGGHGGMDFVMAYRLIQCMKEGTPPDIDVYD
AAAWSAPGPLSEASVANGSAPQKFPDFTRGKWQTRQPV

Specific function: Glycosidase

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family. Glycosyl hydrolase 109 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GH109_SOLUE (Q01S58)

Other databases:

- EMBL:   CP000473
- RefSeq:   YP_827797.1
- ProteinModelPortal:   Q01S58
- SMR:   Q01S58
- STRING:   Q01S58
- GeneID:   4431835
- GenomeReviews:   CP000473_GR
- KEGG:   sus:Acid_6590
- NMPDR:   fig|234267.9.peg.6262
- eggNOG:   COG0673
- HOGENOM:   HBG611861
- OMA:   TGSWRTY
- GO:   GO:0005488
- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR006311
- Gene3D:   G3DSA:3.40.50.720
- TIGRFAMs:   TIGR01409

Pfam domain/function: PF01408 GFO_IDH_MocA

EC number: NA

Molecular weight: Translated: 48657; Mature: 48657

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS51318 TAT

Important sites: BINDING 74-74 BINDING 174-174 BINDING 203-203 BINDING 221-221 BINDING 233-233 BINDING 315-315

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTSRRDLLKLASLAGIGAGLARSQGSSKSMAGVSFKPNGTVRIGVIGTGGRGGSLIEN
CCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCEEEEEEEECCCCCCHHHHH
FSAVEGVQITALCDTVKDKVLKQQAWLDKAGKASHPIALFHSDDHAFENLVKRDDVDLVV
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCEEE
VSTPWVWHTRMAVAAMKQGKHVAVEVPAARTIDECWELVNTSEATQRHCIQLENCCYGYN
EECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
EMMVLNMVRAGLFGELTHGGAAYNHDLRSILFSAEGEGEWRRFEHLNRDGNLYPTHGLGP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCH
VAHYMDVNRGDRFDTLVSMSSISASLQQYRKEKIPAGDPRQKEVYKEGDFNVSLIRTVKG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCC
RVIELEHNVSSPQPYDRINLIAGTKGIFRDYPPRIYFDGARREDFETLDRYKEKYEHPLW
EEEEEECCCCCCCCCCCEEEEECCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHH
KKVGELAKELGGHGGMDFVMAYRLIQCMKEGTPPDIDVYDAAAWSAPGPLSEASVANGSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQKFPDFTRGKWQTRQPV
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKTSRRDLLKLASLAGIGAGLARSQGSSKSMAGVSFKPNGTVRIGVIGTGGRGGSLIEN
CCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCEEEEEEEECCCCCCHHHHH
FSAVEGVQITALCDTVKDKVLKQQAWLDKAGKASHPIALFHSDDHAFENLVKRDDVDLVV
HHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCEEE
VSTPWVWHTRMAVAAMKQGKHVAVEVPAARTIDECWELVNTSEATQRHCIQLENCCYGYN
EECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH
EMMVLNMVRAGLFGELTHGGAAYNHDLRSILFSAEGEGEWRRFEHLNRDGNLYPTHGLGP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCH
VAHYMDVNRGDRFDTLVSMSSISASLQQYRKEKIPAGDPRQKEVYKEGDFNVSLIRTVKG
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCC
RVIELEHNVSSPQPYDRINLIAGTKGIFRDYPPRIYFDGARREDFETLDRYKEKYEHPLW
EEEEEECCCCCCCCCCCEEEEECCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHH
KKVGELAKELGGHGGMDFVMAYRLIQCMKEGTPPDIDVYDAAAWSAPGPLSEASVANGSA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PQKFPDFTRGKWQTRQPV
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA