| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625615
Identifier: 116625615
GI number: 116625615
Start: 8224759
End: 8225655
Strand: Direct
Name: 116625615
Synonym: Acid_6564
Alternate gene names: NA
Gene position: 8224759-8225655 (Clockwise)
Preceding gene: 116625614
Following gene: 116625618
Centisome position: 82.53
GC content: 55.41
Gene sequence:
>897_bases ATGAAGAAAACAATCTTTTTCGCACAAATAGCCTTCGCTCTGTTGGCTGTCCCGGCATTCGCCGGAAATGATAAGAACTA TACCTATCTGGCCTTGGGAGATTCGATTCCGTTCGGAATGAACATCCTCCTGATTCCGCCGTACGCCTCACAATTTCCCA CCCCGTCTCAATTCGTTGGCTACCCGGAGACGGTTGGCTCGGTGGAACATCTCTTAACCTCCAAGAAATTGGTCAACGCT TCCTGCCCGGGGGAGAGCAGCGGTAGTTTCCTGAATGTAAACCTGCTGGACTACGGCTGCAACAGCCCTCATCCGCTGCC GGACGGGACTTTCCTGCCAGCGTTTAAGCCGAGCTTCGGCCTAAAAGCGGACTATAGTGGCACAACCTCCCAGATGGACT TCGCCGAGGCGCAACTCGCGTCAAACAAGCATATCGACGCGGTTACCCTGAGTATTGGGGCGAACGACGCCTTATTGGTG GTACCACAGCTCCTCCAGTGCGGCCAGGACAAGACTTGTGCGACGAATGTTTTGAAGCCAGTGCTGGATAACTACGCGGG CAACCTCATCCAGATACTCTCGCGCATTCGCGCTAAGTATAACGGGAGATTGGTTCTGTTGACGTATTACTCTCCTGATC CTCGGCTGGACGATGTCGCGGTGGCAGTCAACACAGTGATGACTGCGGTCGCTTCTAATCCGGCATTCGGGCCCGTGCAT TTCGCCGATGGCTTCAACGCGTTTCAAACGGCGTCAGCTTTGTTTGGCGGTGACGCGTGCAAGGCTGGACTTCTCATTCG CCTACCCGCGGGATCGCCGACCCCCTGCGATATTCACCCGTCGCCGATTGGCCGCGATATCCTGGCGGCGATAGTAGAAG TAGCCCTGCACGAGTAA
Upstream 100 bases:
>100_bases AGGAGTATCGTAGAGAACGTACTTTCGGCCTACTTCTAAACAAAGTCGTTAACTTTTTGTGCGGTCGGTGCCAGAATGAG AAAACGAATTGTGCCTTTTT
Downstream 100 bases:
>100_bases CTTATACCTTACGCAGTTTGGTCACGCGGCCGACTTCGACCCACTCGACGACAAAGATGTTGCCTTTGTGGTCGAAGCAG GCACCGTGGGGTGCGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKKTIFFAQIAFALLAVPAFAGNDKNYTYLALGDSIPFGMNILLIPPYASQFPTPSQFVGYPETVGSVEHLLTSKKLVNA SCPGESSGSFLNVNLLDYGCNSPHPLPDGTFLPAFKPSFGLKADYSGTTSQMDFAEAQLASNKHIDAVTLSIGANDALLV VPQLLQCGQDKTCATNVLKPVLDNYAGNLIQILSRIRAKYNGRLVLLTYYSPDPRLDDVAVAVNTVMTAVASNPAFGPVH FADGFNAFQTASALFGGDACKAGLLIRLPAGSPTPCDIHPSPIGRDILAAIVEVALHE
Sequences:
>Translated_298_residues MKKTIFFAQIAFALLAVPAFAGNDKNYTYLALGDSIPFGMNILLIPPYASQFPTPSQFVGYPETVGSVEHLLTSKKLVNA SCPGESSGSFLNVNLLDYGCNSPHPLPDGTFLPAFKPSFGLKADYSGTTSQMDFAEAQLASNKHIDAVTLSIGANDALLV VPQLLQCGQDKTCATNVLKPVLDNYAGNLIQILSRIRAKYNGRLVLLTYYSPDPRLDDVAVAVNTVMTAVASNPAFGPVH FADGFNAFQTASALFGGDACKAGLLIRLPAGSPTPCDIHPSPIGRDILAAIVEVALHE >Mature_298_residues MKKTIFFAQIAFALLAVPAFAGNDKNYTYLALGDSIPFGMNILLIPPYASQFPTPSQFVGYPETVGSVEHLLTSKKLVNA SCPGESSGSFLNVNLLDYGCNSPHPLPDGTFLPAFKPSFGLKADYSGTTSQMDFAEAQLASNKHIDAVTLSIGANDALLV VPQLLQCGQDKTCATNVLKPVLDNYAGNLIQILSRIRAKYNGRLVLLTYYSPDPRLDDVAVAVNTVMTAVASNPAFGPVH FADGFNAFQTASALFGGDACKAGLLIRLPAGSPTPCDIHPSPIGRDILAAIVEVALHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31592; Mature: 31592
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIFFAQIAFALLAVPAFAGNDKNYTYLALGDSIPFGMNILLIPPYASQFPTPSQFVG CCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHCC YPETVGSVEHLLTSKKLVNASCPGESSGSFLNVNLLDYGCNSPHPLPDGTFLPAFKPSFG CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC LKADYSGTTSQMDFAEAQLASNKHIDAVTLSIGANDALLVVPQLLQCGQDKTCATNVLKP CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHHCCCCCHHHHHHHHH VLDNYAGNLIQILSRIRAKYNGRLVLLTYYSPDPRLDDVAVAVNTVMTAVASNPAFGPVH HHHHHCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE FADGFNAFQTASALFGGDACKAGLLIRLPAGSPTPCDIHPSPIGRDILAAIVEVALHE ECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKKTIFFAQIAFALLAVPAFAGNDKNYTYLALGDSIPFGMNILLIPPYASQFPTPSQFVG CCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCHHHCC YPETVGSVEHLLTSKKLVNASCPGESSGSFLNVNLLDYGCNSPHPLPDGTFLPAFKPSFG CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCC LKADYSGTTSQMDFAEAQLASNKHIDAVTLSIGANDALLVVPQLLQCGQDKTCATNVLKP CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHHHHHHCCCCCHHHHHHHHH VLDNYAGNLIQILSRIRAKYNGRLVLLTYYSPDPRLDDVAVAVNTVMTAVASNPAFGPVH HHHHHCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEE FADGFNAFQTASALFGGDACKAGLLIRLPAGSPTPCDIHPSPIGRDILAAIVEVALHE ECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA