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The map label for this gene is hypA [H]

Identifier: 116625613

GI number: 116625613

Start: 8223745

End: 8223993

Strand: Direct

Name: hypA [H]

Synonym: Acid_6562

Alternate gene names: 116625613

Gene position: 8223745-8223993 (Clockwise)

Preceding gene: 116625612

Following gene: 116625614

Centisome position: 82.52

GC content: 65.46

Gene sequence:

>249_bases
ATGCACGAGCTTTCGATTGCCATGAGCATCGTCGAAGTGGCGTCCGAGGAAGCCCGGCGCCAGGGCGGTGCGCGCGTGGA
TGCGGTGCACCTGAAGTTAGGGGCGCTCTCGGGCGTGGTGAAAGAGGCGCTTCTGTTCTCCTGGGATTTGGCGTGCGAGG
AGTCGCCGGTCGCGGGCGCGAGGCTGGAGATCGAGGAGGCGCGCGGGTCGGAACTGGAAGTGACCGCGTTGGAGATTGAG
GATGGCTAG

Upstream 100 bases:

>100_bases
TCAGTAAAACCTTGGGCAGCATGGTTTTGGGGCTGATCGCTTTGGGTATGATCATGAACGCCAAGGACATCAGACGCTAC
GTGCGCATGTCGATGATGTA

Downstream 100 bases:

>100_bases
GGCGTGACGCCGCGATTGGTGGAGGTTCGCAAGAACGTTCTGAAGCGCAACGACGAACTGGCGCGCGCGCTGCGGATGCG
ATTTGCGGAGGCGGGCGTCT

Product: zinc finger protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MHELSIAMSIVEVASEEARRQGGARVDAVHLKLGALSGVVKEALLFSWDLACEESPVAGARLEIEEARGSELEVTALEIE
DG

Sequences:

>Translated_82_residues
MHELSIAMSIVEVASEEARRQGGARVDAVHLKLGALSGVVKEALLFSWDLACEESPVAGARLEIEEARGSELEVTALEIE
DG
>Mature_82_residues
MHELSIAMSIVEVASEEARRQGGARVDAVHLKLGALSGVVKEALLFSWDLACEESPVAGARLEIEEARGSELEVTALEIE
DG

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 8747; Mature: 8747

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELSIAMSIVEVASEEARRQGGARVDAVHLKLGALSGVVKEALLFSWDLACEESPVAGA
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RLEIEEARGSELEVTALEIEDG
EEEEECCCCCEEEEEEEEEECC
>Mature Secondary Structure
MHELSIAMSIVEVASEEARRQGGARVDAVHLKLGALSGVVKEALLFSWDLACEESPVAGA
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RLEIEEARGSELEVTALEIEDG
EEEEECCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA