Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

Click here to switch to the map view.

The map label for this gene is ycjU [C]

Identifier: 116625413

GI number: 116625413

Start: 7978406

End: 7979056

Strand: Reverse

Name: ycjU [C]

Synonym: Acid_6358

Alternate gene names: 116625413

Gene position: 7979056-7978406 (Counterclockwise)

Preceding gene: 116625414

Following gene: 116625412

Centisome position: 80.07

GC content: 59.91

Gene sequence:

>651_bases
ATGATCGCCCTGCTTTTCGACATGGATGGGGTGATTGTTGATTCGAACCCGATGCACCGGCAGGCCTGGGAGATTTTCAA
CCGGCGCTACGGCGTGGAAACCACCATGGCGATGCACGAGCGCATGTATGGGAAGCGCAACGACGAGATCGTCCGCGATT
TCTTCGGAGACGCTCTCAGTGACGAGGAGGTCGCCGGGCGCGGCTTCGCCAAGGAGACCCTCTACCGGGAAATGGTGGCG
GGGCGAGTCGAAGAAATGCTGGTACCGGGACTGCGCGACTTTCTGGAGCGGCATCGGGACCTGCCGATGGGGCTGGCGAG
CAATGCCGAGCCTCAGAACGTCGCTCTTTTCCTGGATGGCGCGGGGCTGCGGCCCTATTTCGGCGCGGTGGTCGATGGCC
ATCAGGTGGCCCGTCCCAAGCCTTTCCCGGATATTTATCTGCGCGCCGCAAATATTTTGAATACGGAACCCGAAGACTGC
ATCGTGTTCGAGGACTCTCATTCCGGGGTCGCGGCCGGGCTGGCTGCCGGGATGAGGGTCATCGGTCTTCGTACTACTTT
CGTTAACTTGCCCGGAACGGTGCTAACCGTCGATAATTTTTTGAGCGGTAACTTGGAGACATGGCTGCAAACGCTGGTGC
GATCCGCCTAG

Upstream 100 bases:

>100_bases
ATCCCTATGAAGTGCCGGAGGTGATCGCGCTGCCCATCGTGGCCGGGTCAGAAAATTATCTGAATTGGCTGGGGCATAAT
CTGCGAGCCGGTGAGGCCGA

Downstream 100 bases:

>100_bases
CTGCGCTGCGCGTAACGGCACTGGGAGTGTCTCTGGCCGTGCTTTGCCTGCCCGCCGCGGCCCAGATCCGAATCACCTTA
TCGCAACTCAGCTTCCGCTC

Product: HAD family hydrolase

Products: Beta-D-Glucose 6- Phosphate. [C]

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIALLFDMDGVIVDSNPMHRQAWEIFNRRYGVETTMAMHERMYGKRNDEIVRDFFGDALSDEEVAGRGFAKETLYREMVA
GRVEEMLVPGLRDFLERHRDLPMGLASNAEPQNVALFLDGAGLRPYFGAVVDGHQVARPKPFPDIYLRAANILNTEPEDC
IVFEDSHSGVAAGLAAGMRVIGLRTTFVNLPGTVLTVDNFLSGNLETWLQTLVRSA

Sequences:

>Translated_216_residues
MIALLFDMDGVIVDSNPMHRQAWEIFNRRYGVETTMAMHERMYGKRNDEIVRDFFGDALSDEEVAGRGFAKETLYREMVA
GRVEEMLVPGLRDFLERHRDLPMGLASNAEPQNVALFLDGAGLRPYFGAVVDGHQVARPKPFPDIYLRAANILNTEPEDC
IVFEDSHSGVAAGLAAGMRVIGLRTTFVNLPGTVLTVDNFLSGNLETWLQTLVRSA
>Mature_216_residues
MIALLFDMDGVIVDSNPMHRQAWEIFNRRYGVETTMAMHERMYGKRNDEIVRDFFGDALSDEEVAGRGFAKETLYREMVA
GRVEEMLVPGLRDFLERHRDLPMGLASNAEPQNVALFLDGAGLRPYFGAVVDGHQVARPKPFPDIYLRAANILNTEPEDC
IVFEDSHSGVAAGLAAGMRVIGLRTTFVNLPGTVLTVDNFLSGNLETWLQTLVRSA

Specific function: Reversible Transformation Of Glucose 6-Phosphate And Beta-Glucose 1-Phosphate (By Similarity). [C]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1787576, Length=188, Percent_Identity=31.3829787234043, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1789046, Length=182, Percent_Identity=31.8681318681319, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1788021, Length=190, Percent_Identity=30.5263157894737, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI87082080, Length=185, Percent_Identity=31.8918918918919, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 5.4.2.6 [C]

Molecular weight: Translated: 24091; Mature: 24091

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALLFDMDGVIVDSNPMHRQAWEIFNRRYGVETTMAMHERMYGKRNDEIVRDFFGDALS
CEEEEEECCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCC
DEEVAGRGFAKETLYREMVAGRVEEMLVPGLRDFLERHRDLPMGLASNAEPQNVALFLDG
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
AGLRPYFGAVVDGHQVARPKPFPDIYLRAANILNTEPEDCIVFEDSHSGVAAGLAAGMRV
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH
IGLRTTFVNLPGTVLTVDNFLSGNLETWLQTLVRSA
EEEEEEEEECCCEEEEECHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIALLFDMDGVIVDSNPMHRQAWEIFNRRYGVETTMAMHERMYGKRNDEIVRDFFGDALS
CEEEEEECCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCC
DEEVAGRGFAKETLYREMVAGRVEEMLVPGLRDFLERHRDLPMGLASNAEPQNVALFLDG
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
AGLRPYFGAVVDGHQVARPKPFPDIYLRAANILNTEPEDCIVFEDSHSGVAAGLAAGMRV
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH
IGLRTTFVNLPGTVLTVDNFLSGNLETWLQTLVRSA
EEEEEEEEECCCEEEEECHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Beta-D-Glucose 1-Phosphate [C]

Specific reaction: Beta-D-Glucose 1-Phosphate = Beta-D-Glucose 6- Phosphate. [C]

General reaction: Group transfer (intramolecular phosphate group isomerization [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]