| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624488
Identifier: 116624488
GI number: 116624488
Start: 6778680
End: 6779510
Strand: Direct
Name: 116624488
Synonym: Acid_5410
Alternate gene names: NA
Gene position: 6778680-6779510 (Clockwise)
Preceding gene: 116624487
Following gene: 116624489
Centisome position: 68.02
GC content: 63.54
Gene sequence:
>831_bases ATGGCGGTAGAATCCGATTTCATGCGAAGCCTGATTTTCGGACTCGCTTGCGTGTTCCTGCTTGGAACCGCGCAACTCGC GCCTGCCCAGACGCCCAAGATTCAAGTACTCATCATCACCGGCCAGAACGGCCATGACTGGCGGGCCACCACTCCGGTGC TGCGTAAGCTGCTGGAGAACAGCAAACGCTTCGAGGTACGGGTCACCGAGGAGTTTCGCGGGGGCGGACCGGAGACGCTG GCGCCGTACGACCTGGTGGTTCTGAACTACTACGATGGCAACAAGCCCGCGCAGCGCTGGGGCGAACGCGCGGATAAGGC GCTGCTGGATTTCGTGCGCGGCGGCAAGGGCCTGGTGATCTACCATTTCTCGGCGGCGGCCTTCAACGGCTGGAGCGAGT ACGAACAGCTTTGCGCGGGCAACTGGAGGCCGAATAACGGCCACCACTCGGCGCGGCACGATTTCACCGTGACCCTGACC GACCGCGAGCACCCGATCACGCGCGGGCTGCGCGCCACCTTCCCACAGGGCAACGACGAATTGTACGCGAATTTGAAATG GCAACCCGAGGGAACCTATCACGTGCTTGCCACCGCCTACGATGACCATTCCCTGTACAAGGCCGGCGAGAAGCAGCCGA TTCCGGGAGCGGGACTCAATCAGCCGATGCTGTGGACCGTCGAATTCGGCAGCGGCCGCGTGTTCACGACCGCGCTCGGC CACGACCCGGACGCGATGAAGATGGCGGGGTTCGTCGCCACGTTCGTACGTGGCGCGGAGTGGGCGGCCACCGGAAACGT GACCATTCCGGCGCCGGACGAGTTGAAGTAG
Upstream 100 bases:
>100_bases GGCGCTGGGCTTCGCCAAAGGCGTGAAAGTGGCGAAGATCGGGCCGGTTCGCGAGCGCAAAGTCGCGTAACGGATCAAAA AGGGTCCCGCCTAGGCCCGC
Downstream 100 bases:
>100_bases CGTGCTGCGCGGGCTTCGATCCATTTGGCTGTGGGCGGCGAACGTATGGCTGATTCTGCTGTGGACGGCGATCGTGGCGA CGGTTCGGCTATTCGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAVESDFMRSLIFGLACVFLLGTAQLAPAQTPKIQVLIITGQNGHDWRATTPVLRKLLENSKRFEVRVTEEFRGGGPETL APYDLVVLNYYDGNKPAQRWGERADKALLDFVRGGKGLVIYHFSAAAFNGWSEYEQLCAGNWRPNNGHHSARHDFTVTLT DREHPITRGLRATFPQGNDELYANLKWQPEGTYHVLATAYDDHSLYKAGEKQPIPGAGLNQPMLWTVEFGSGRVFTTALG HDPDAMKMAGFVATFVRGAEWAATGNVTIPAPDELK
Sequences:
>Translated_276_residues MAVESDFMRSLIFGLACVFLLGTAQLAPAQTPKIQVLIITGQNGHDWRATTPVLRKLLENSKRFEVRVTEEFRGGGPETL APYDLVVLNYYDGNKPAQRWGERADKALLDFVRGGKGLVIYHFSAAAFNGWSEYEQLCAGNWRPNNGHHSARHDFTVTLT DREHPITRGLRATFPQGNDELYANLKWQPEGTYHVLATAYDDHSLYKAGEKQPIPGAGLNQPMLWTVEFGSGRVFTTALG HDPDAMKMAGFVATFVRGAEWAATGNVTIPAPDELK >Mature_275_residues AVESDFMRSLIFGLACVFLLGTAQLAPAQTPKIQVLIITGQNGHDWRATTPVLRKLLENSKRFEVRVTEEFRGGGPETLA PYDLVVLNYYDGNKPAQRWGERADKALLDFVRGGKGLVIYHFSAAAFNGWSEYEQLCAGNWRPNNGHHSARHDFTVTLTD REHPITRGLRATFPQGNDELYANLKWQPEGTYHVLATAYDDHSLYKAGEKQPIPGAGLNQPMLWTVEFGSGRVFTTALGH DPDAMKMAGFVATFVRGAEWAATGNVTIPAPDELK
Specific function: Unknown
COG id: COG3828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30591; Mature: 30460
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVESDFMRSLIFGLACVFLLGTAQLAPAQTPKIQVLIITGQNGHDWRATTPVLRKLLEN CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCC SKRFEVRVTEEFRGGGPETLAPYDLVVLNYYDGNKPAQRWGERADKALLDFVRGGKGLVI CCEEEEEEEHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE YHFSAAAFNGWSEYEQLCAGNWRPNNGHHSARHDFTVTLTDREHPITRGLRATFPQGNDE EEECCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCEECCCCCCCE LYANLKWQPEGTYHVLATAYDDHSLYKAGEKQPIPGAGLNQPMLWTVEFGSGRVFTTALG EEEEEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECC HDPDAMKMAGFVATFVRGAEWAATGNVTIPAPDELK CCCCHHHHHHHHHHHHCCCCEEECCCEEECCCCCCC >Mature Secondary Structure AVESDFMRSLIFGLACVFLLGTAQLAPAQTPKIQVLIITGQNGHDWRATTPVLRKLLEN CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCC SKRFEVRVTEEFRGGGPETLAPYDLVVLNYYDGNKPAQRWGERADKALLDFVRGGKGLVI CCEEEEEEEHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE YHFSAAAFNGWSEYEQLCAGNWRPNNGHHSARHDFTVTLTDREHPITRGLRATFPQGNDE EEECCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCEECCCCCCCE LYANLKWQPEGTYHVLATAYDDHSLYKAGEKQPIPGAGLNQPMLWTVEFGSGRVFTTALG EEEEEEECCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECC HDPDAMKMAGFVATFVRGAEWAATGNVTIPAPDELK CCCCHHHHHHHHHHHHCCCCEEECCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA