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The map label for this gene is 116624487

Identifier: 116624487

GI number: 116624487

Start: 6777798

End: 6778649

Strand: Direct

Name: 116624487

Synonym: Acid_5409

Alternate gene names: NA

Gene position: 6777798-6778649 (Clockwise)

Preceding gene: 116624479

Following gene: 116624488

Centisome position: 68.01

GC content: 62.79

Gene sequence:

>852_bases
ATGGAGATTGAGTTCGCACCGGTAGTCAAACGGGAAGGAATCAACTGGATCACGGTGACGGCGTTCGCTGTGTTTCATCT
GGGCGCGGTGGCCGCACTGTTTTTCTTCAGCTGGCCGGCCTTCTTCGCGGCGGTGTTTCTGTACTGGGCGTCGTTGAGCC
TGGGGATCGGGATGGGCTATCACCGGCTGTTGACGCACCGGTCTTACCAGGTTCCCAAGTGGCTGGAGCACTCGCTGGCC
GTCTGCGGAGCGCTGGCACTGGAGGGCGGTCCGATTTTCTGGGTGGCGACGCACCGCGTGCATCATCAGTTCTCCGACAA
GCACGGCGACCCGCACACGCCGCGCGATGGGAAGTGGTGGTCCCACATCACCTGGATGATGGTGGGCGACGTGACCCATT
GCGATTCGGTGGCGTGCGCCAAGTACGCACCGGACATGGCGGCGGACCCATTCTACGTGTGGCTCTCGAATTACCATTGG
ATTCCGCTGACGGTGGTGGGGATCGCGCTGCTCGCGATCGGCGGACTGCCGTTCCTGCTGTGGGGCGTCTTCTTCCGCGT
CACGTTGGGTTTGCACGCGACCTGGATGGTCAACTCGCTGACTCACCTGTGGGGAGCGCGCCGGTTCGATACGCGGGACG
ACTCGCGCAACAACTGGTTCGTGGCGGCGTTGAGCTTCGGCGAGGGCTGGCACAACAATCACCACGCACACCCGACATCT
GCGCGTCACGGGCTGGCGTGGTACGAAGTGGATATTTCCTGGATGACGATCCGCCTGCTGCAGGCGCTGGGCTTCGCCAA
AGGCGTGAAAGTGGCGAAGATCGGGCCGGTTCGCGAGCGCAAAGTCGCGTAA

Upstream 100 bases:

>100_bases
TATGGTCGGCGGGCGGGGCATACCTATTACACAACTCTTACACGGCCCGCGGGTGGGCGCTGCTATTTTTAGGGTGGGGC
ACACTCGCCCAGAGGGCTGC

Downstream 100 bases:

>100_bases
CGGATCAAAAAGGGTCCCGCCTAGGCCCGCATGGCGGTAGAATCCGATTTCATGCGAAGCCTGATTTTCGGACTCGCTTG
CGTGTTCCTGCTTGGAACCG

Product: Delta-9 acyl-phospholipid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Protein; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MEIEFAPVVKREGINWITVTAFAVFHLGAVAALFFFSWPAFFAAVFLYWASLSLGIGMGYHRLLTHRSYQVPKWLEHSLA
VCGALALEGGPIFWVATHRVHHQFSDKHGDPHTPRDGKWWSHITWMMVGDVTHCDSVACAKYAPDMAADPFYVWLSNYHW
IPLTVVGIALLAIGGLPFLLWGVFFRVTLGLHATWMVNSLTHLWGARRFDTRDDSRNNWFVAALSFGEGWHNNHHAHPTS
ARHGLAWYEVDISWMTIRLLQALGFAKGVKVAKIGPVRERKVA

Sequences:

>Translated_283_residues
MEIEFAPVVKREGINWITVTAFAVFHLGAVAALFFFSWPAFFAAVFLYWASLSLGIGMGYHRLLTHRSYQVPKWLEHSLA
VCGALALEGGPIFWVATHRVHHQFSDKHGDPHTPRDGKWWSHITWMMVGDVTHCDSVACAKYAPDMAADPFYVWLSNYHW
IPLTVVGIALLAIGGLPFLLWGVFFRVTLGLHATWMVNSLTHLWGARRFDTRDDSRNNWFVAALSFGEGWHNNHHAHPTS
ARHGLAWYEVDISWMTIRLLQALGFAKGVKVAKIGPVRERKVA
>Mature_283_residues
MEIEFAPVVKREGINWITVTAFAVFHLGAVAALFFFSWPAFFAAVFLYWASLSLGIGMGYHRLLTHRSYQVPKWLEHSLA
VCGALALEGGPIFWVATHRVHHQFSDKHGDPHTPRDGKWWSHITWMMVGDVTHCDSVACAKYAPDMAADPFYVWLSNYHW
IPLTVVGIALLAIGGLPFLLWGVFFRVTLGLHATWMVNSLTHLWGARRFDTRDDSRNNWFVAALSFGEGWHNNHHAHPTS
ARHGLAWYEVDISWMTIRLLQALGFAKGVKVAKIGPVRERKVA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596961, Length=289, Percent_Identity=31.1418685121107, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI53759151, Length=288, Percent_Identity=29.1666666666667, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI148596938, Length=198, Percent_Identity=31.3131313131313, Blast_Score=82, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17561774, Length=256, Percent_Identity=30.078125, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17561776, Length=256, Percent_Identity=28.90625, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17540878, Length=249, Percent_Identity=28.1124497991968, Blast_Score=103, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6321383, Length=247, Percent_Identity=33.6032388663968, Blast_Score=129, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24646500, Length=281, Percent_Identity=29.8932384341637, Blast_Score=127, Evalue=9e-30,
Organism=Drosophila melanogaster, GI24646303, Length=288, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646299, Length=288, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646305, Length=288, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646301, Length=288, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646297, Length=288, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646295, Length=288, Percent_Identity=29.1666666666667, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21358571, Length=284, Percent_Identity=30.2816901408451, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24662393, Length=281, Percent_Identity=26.3345195729537, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21358573, Length=283, Percent_Identity=30.0353356890459, Blast_Score=107, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32056; Mature: 32056

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEFAPVVKREGINWITVTAFAVFHLGAVAALFFFSWPAFFAAVFLYWASLSLGIGMGY
CCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
HRLLTHRSYQVPKWLEHSLAVCGALALEGGPIFWVATHRVHHQFSDKHGDPHTPRDGKWW
HHHHHCCCCCCHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHH
SHITWMMVGDVTHCDSVACAKYAPDMAADPFYVWLSNYHWIPLTVVGIALLAIGGLPFLL
HHEEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHH
WGVFFRVTLGLHATWMVNSLTHLWGARRFDTRDDSRNNWFVAALSFGEGWHNNHHAHPTS
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
ARHGLAWYEVDISWMTIRLLQALGFAKGVKVAKIGPVRERKVA
CCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCC
>Mature Secondary Structure
MEIEFAPVVKREGINWITVTAFAVFHLGAVAALFFFSWPAFFAAVFLYWASLSLGIGMGY
CCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
HRLLTHRSYQVPKWLEHSLAVCGALALEGGPIFWVATHRVHHQFSDKHGDPHTPRDGKWW
HHHHHCCCCCCHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHH
SHITWMMVGDVTHCDSVACAKYAPDMAADPFYVWLSNYHWIPLTVVGIALLAIGGLPFLL
HHEEEEEECCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHHH
WGVFFRVTLGLHATWMVNSLTHLWGARRFDTRDDSRNNWFVAALSFGEGWHNNHHAHPTS
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
ARHGLAWYEVDISWMTIRLLQALGFAKGVKVAKIGPVRERKVA
CCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA