| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116624019
Identifier: 116624019
GI number: 116624019
Start: 6225059
End: 6225646
Strand: Direct
Name: 116624019
Synonym: Acid_4931
Alternate gene names: NA
Gene position: 6225059-6225646 (Clockwise)
Preceding gene: 116624015
Following gene: 116624024
Centisome position: 62.47
GC content: 62.93
Gene sequence:
>588_bases TTGAGCCAATTTCTCCACGTCCAAATCAATGTGAAGCGCCAATTGTGGGCCATTTCGCTCTTGTTTGTCGCCGCCGGCCT CGCCGTCGCGGCCGGTGACTATTTCTCCGCCAAACAGAAATTTGACTCCATCGAAAACGGCCGCCTGCATCCTGGCGCCC ATGTAACCCTGAGCTATCCCGAACTCACCGCCTGGGTCGAGAAAGAAGCTCCCCGCGGCGTGCGGAGCCCCAACCTCCGG GTCACCGAGCGCGACCTCGCCACCGGCACCGCTCTCATCGATTTCGCCAAACTCGAGCGTTCCCAGGGACAACGACCCGG CTGGCTTATGTCGAAACTCCTCGAAGGCGAACGACCGGTCAGCGTCACCGCGCGCATCCGGTCGGCGAACGGACACGCCA CCGTAGACCTCCAGCGCGTCGAGATCTCCGGCGTAACAATCGACGGCCGTACGCTGGATTTCCTGGTTCAGAACTTCCTG CTCGCCTTGTACCCCGACGCTGTCATCGGTAAGCCCTTCGAACTCGGCCACCGCATCGACCGGCTCGACGTGGCGCCCGC CGCCGTCGGTGTCGTGATCGGCCGCTAG
Upstream 100 bases:
>100_bases TAGTAAACCGTTGCTTCTAAACGGGAATCACCTACGTACCCGGTTGGACTGTGTGCTCTTTCACGCAGCACCTGAGTCCT ATGGCGCTGACCGGAGCAAC
Downstream 100 bases:
>100_bases TAGACGTTCCGTTCCCCGCCCATCGCCGCCCGCGCGAATCGCGTCACCCGGAGTTCGTCGATGGCGATAGTGTGCGCGCG CCCGTCCAGCACCTCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSQFLHVQINVKRQLWAISLLFVAAGLAVAAGDYFSAKQKFDSIENGRLHPGAHVTLSYPELTAWVEKEAPRGVRSPNLR VTERDLATGTALIDFAKLERSQGQRPGWLMSKLLEGERPVSVTARIRSANGHATVDLQRVEISGVTIDGRTLDFLVQNFL LALYPDAVIGKPFELGHRIDRLDVAPAAVGVVIGR
Sequences:
>Translated_195_residues MSQFLHVQINVKRQLWAISLLFVAAGLAVAAGDYFSAKQKFDSIENGRLHPGAHVTLSYPELTAWVEKEAPRGVRSPNLR VTERDLATGTALIDFAKLERSQGQRPGWLMSKLLEGERPVSVTARIRSANGHATVDLQRVEISGVTIDGRTLDFLVQNFL LALYPDAVIGKPFELGHRIDRLDVAPAAVGVVIGR >Mature_194_residues SQFLHVQINVKRQLWAISLLFVAAGLAVAAGDYFSAKQKFDSIENGRLHPGAHVTLSYPELTAWVEKEAPRGVRSPNLRV TERDLATGTALIDFAKLERSQGQRPGWLMSKLLEGERPVSVTARIRSANGHATVDLQRVEISGVTIDGRTLDFLVQNFLL ALYPDAVIGKPFELGHRIDRLDVAPAAVGVVIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21391; Mature: 21260
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFLHVQINVKRQLWAISLLFVAAGLAVAAGDYFSAKQKFDSIENGRLHPGAHVTLSYP CCCEEEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEECC ELTAWVEKEAPRGVRSPNLRVTERDLATGTALIDFAKLERSQGQRPGWLMSKLLEGERPV HHHHHHHHCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCE SVTARIRSANGHATVDLQRVEISGVTIDGRTLDFLVQNFLLALYPDAVIGKPFELGHRID EEEEEEECCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCHHHCCCCC RLDVAPAAVGVVIGR CCCCCCHHEEEEECC >Mature Secondary Structure SQFLHVQINVKRQLWAISLLFVAAGLAVAAGDYFSAKQKFDSIENGRLHPGAHVTLSYP CCEEEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEECC ELTAWVEKEAPRGVRSPNLRVTERDLATGTALIDFAKLERSQGQRPGWLMSKLLEGERPV HHHHHHHHCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCE SVTARIRSANGHATVDLQRVEISGVTIDGRTLDFLVQNFLLALYPDAVIGKPFELGHRID EEEEEEECCCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHCCHHHCCCCHHHCCCCC RLDVAPAAVGVVIGR CCCCCCHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA