| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is acyII [H]
Identifier: 116624024
GI number: 116624024
Start: 6230685
End: 6232910
Strand: Direct
Name: acyII [H]
Synonym: Acid_4936
Alternate gene names: 116624024
Gene position: 6230685-6232910 (Clockwise)
Preceding gene: 116624019
Following gene: 116624025
Centisome position: 62.52
GC content: 62.71
Gene sequence:
>2226_bases ATGTCTCGCAACCTGGTAGCGCACGCCGTCAAGTATGTGAATTATGCGATCGCCTTCGCGCTGATCATCGCGGCCATCGC GGTGTATTGGTATGTCTGGCGACCTTTGCCGCAGCGCTCGGGCTCCATCGACGCTGCTCTCTCGGCCCCCGCCACCGTCG AGTTCGGCGCTCACGGCGAACCACACATTCGCGCTGCCAGCCTCGACGACGCATTTTTTCTCCAAGGGTATGTCACCGCA CAAGACCGTCTCTTCCAGATGGACGCCCTGCGCCGCTTCGCCGGCGGGACTCTCGCCGAAGTATTCGGACCTTCGCTGGT CGAAAGCGATCGCGAAGCCCGCAAACTCCGTATGCGGCGCATCGCCGAAGACGCCTATGGCCGCCTTCCGGACGCCGACC GCGCCGCCTTCGCAGCCTATACGCGCGGCGTCAATCAATTCATCGCCACCCACCTGAACAACCTGCCCGTGGAGTTCACC CTGCTCCGCTACCAGCCACGCCCCTGGAGCACGGTGGATTGTCTGCTGCTCTGCCTTCATATGTATCGCAACCTCACCAC CACATGGAAGGACGAAATCATCAAGAACAACATGCTCGCCCAGGGAGACCGCGCCAAGGTGGAATTCCTCTTCCCCATGC GCGGACTGGTGGATGGCAACCCCGGCTCCAACGCCTGGGTTCTCTCAGGGAAACATACGGCCTCGGGCAAGCCGCTGCTC TCTAACGACATGCACCTGGAGTATTCCCTGCCCGGCATCTGGTACATGATCTACCTCGACGCTCCCGGCCTCCGCGTCGG CGGTGTTTCGCTGCCCGGCGCGCCCGGTGTCATCGTCGGCCACAATGAGCGCATCGCATGGGGCATCACCAATCTCCACT TCGACGTGCAGGATCTCTACATCGAGAAGTTCGATGACCGCACCGGCCGCTATCTCTTCCGCGGACAGGCGGAGCAGGCG CGCGCCGAACGCGAGATCATCCGCGTCAAGGACAGACCGGCCGTCGAGGTGGATACCTGGATCACCCGCCACGGACCGAT CTTCATCGCCGATGGCACCCAGCGGCTCGCGCTACGCTGGACCGCCGCCGAAACCGGGATGCTCCAGTTCCCTTTTATCG ACGTCGATCGCGCGCAGAATTGGGAACAGTTCACGGCCGCCGTCAAACGCCTTCCCGGCCCCGGCTCGAATTTCGTGTAT GCCGATGTGGATGGCAACATCGGCTATCATGCTGTCGGTATGCTGCCGAGGCGCCGCAATTATCGCGGCGATATCCCGGT GGATGGCTCCTCCGGAAACTTCGAATGGGACGGCTTCATTCCCTTCGAAGAGTTGCCCAGCGTCTACAATCCGCCCGGCG GCATGATCGTCACCGCCAACCAGAATCCCTTCCCGGAGACTTTCCCGTACCCCTTGAACGGCAACTTCGCGCCGCCGCAG CGCTTCATGCAGATCCGCGCCATGCTCTCCGCCCACGAAGGCTGGCGTCCCTCCGACATGCTCACCGTGCAGAAGGATGT GTACTCGGCCTTCAGTCATTTTCTGGCCCGGCAGATCGTGGACGCATACCAGCGGCGCAACGCCCACAATCCGTCGCTCG ACGATTCGGTTGCCATGCTGCGCGAATGGAATGGCCAGATGGATAAGGACCTGCCCGCGCCCTTCCTGATCACGCTCGCT TACCAGCACGTGCGCCGCGCCGTCGCCGAAAACGCCTCCTCCGCCAGCGGCCTCGCCTACGAATTCAACATGGCGCCGGT CGTGGTGCAGCGCCTTCTCACCGAGCGACCCGCCGGCTGGTTCGCCGACTACGACGACATGCTGCTCCGCGCGCTCGCCG ACGCCGTGGAAGAAGCCCGCCGCATCCAGGGCCGGGAACCCAAACGCTGGCGCTACGGCCAGTACCTCTTTATCGCCATC AACAATCCCGTGACTCACCAGATTCCACTGGTCGGCAAGTATTTCGATATCGGCCCCGTGCCCATGAGCGGCTCCACCAC CACCGTCAAACAGACCAGCCGCAGCCTCGCCCCCTCCATGCGCATGACCGCCGACCTCGGCGATTGGGATCGCTCCATAC TTAATATCCCCATCGGGCAATCCGGCCAGATTCTCTCCCGCCACTACAGCGATCAGTGGCTCGACTATTACAACGCTCGC AGCTTCCCCATGCAGTTCAACAAAGTCGAGCCCGCGAGCACGCTGCAATTCCGTCCCACGCGCTGA
Upstream 100 bases:
>100_bases ATGCGCCCCGGGTAAAGCATGGTAAAGCCGCCTGGCCGCCCAATTTACCTCCTCGGCTTAACCTCGCTAGCGGTTATGAT TGAGAATTAACCCCTCGTAA
Downstream 100 bases:
>100_bases CCCGCATGCTGAACTGGCTGCTGATCTTCGTGCCGGTAGCGATCGGGCTCGAGTTTTTCACGCCCGGGCAGCACACGTTG ATCTTCATTACCGCCTGCCT
Product: penicillin amidase
Products: NA
Alternate protein names: Cephalosporin acylase II; Penicillin acylase II; Penicillin amidase II; Penicillin acylase II small subunit; Penicillin acylase II large subunit [H]
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MSRNLVAHAVKYVNYAIAFALIIAAIAVYWYVWRPLPQRSGSIDAALSAPATVEFGAHGEPHIRAASLDDAFFLQGYVTA QDRLFQMDALRRFAGGTLAEVFGPSLVESDREARKLRMRRIAEDAYGRLPDADRAAFAAYTRGVNQFIATHLNNLPVEFT LLRYQPRPWSTVDCLLLCLHMYRNLTTTWKDEIIKNNMLAQGDRAKVEFLFPMRGLVDGNPGSNAWVLSGKHTASGKPLL SNDMHLEYSLPGIWYMIYLDAPGLRVGGVSLPGAPGVIVGHNERIAWGITNLHFDVQDLYIEKFDDRTGRYLFRGQAEQA RAEREIIRVKDRPAVEVDTWITRHGPIFIADGTQRLALRWTAAETGMLQFPFIDVDRAQNWEQFTAAVKRLPGPGSNFVY ADVDGNIGYHAVGMLPRRRNYRGDIPVDGSSGNFEWDGFIPFEELPSVYNPPGGMIVTANQNPFPETFPYPLNGNFAPPQ RFMQIRAMLSAHEGWRPSDMLTVQKDVYSAFSHFLARQIVDAYQRRNAHNPSLDDSVAMLREWNGQMDKDLPAPFLITLA YQHVRRAVAENASSASGLAYEFNMAPVVVQRLLTERPAGWFADYDDMLLRALADAVEEARRIQGREPKRWRYGQYLFIAI NNPVTHQIPLVGKYFDIGPVPMSGSTTTVKQTSRSLAPSMRMTADLGDWDRSILNIPIGQSGQILSRHYSDQWLDYYNAR SFPMQFNKVEPASTLQFRPTR
Sequences:
>Translated_741_residues MSRNLVAHAVKYVNYAIAFALIIAAIAVYWYVWRPLPQRSGSIDAALSAPATVEFGAHGEPHIRAASLDDAFFLQGYVTA QDRLFQMDALRRFAGGTLAEVFGPSLVESDREARKLRMRRIAEDAYGRLPDADRAAFAAYTRGVNQFIATHLNNLPVEFT LLRYQPRPWSTVDCLLLCLHMYRNLTTTWKDEIIKNNMLAQGDRAKVEFLFPMRGLVDGNPGSNAWVLSGKHTASGKPLL SNDMHLEYSLPGIWYMIYLDAPGLRVGGVSLPGAPGVIVGHNERIAWGITNLHFDVQDLYIEKFDDRTGRYLFRGQAEQA RAEREIIRVKDRPAVEVDTWITRHGPIFIADGTQRLALRWTAAETGMLQFPFIDVDRAQNWEQFTAAVKRLPGPGSNFVY ADVDGNIGYHAVGMLPRRRNYRGDIPVDGSSGNFEWDGFIPFEELPSVYNPPGGMIVTANQNPFPETFPYPLNGNFAPPQ RFMQIRAMLSAHEGWRPSDMLTVQKDVYSAFSHFLARQIVDAYQRRNAHNPSLDDSVAMLREWNGQMDKDLPAPFLITLA YQHVRRAVAENASSASGLAYEFNMAPVVVQRLLTERPAGWFADYDDMLLRALADAVEEARRIQGREPKRWRYGQYLFIAI NNPVTHQIPLVGKYFDIGPVPMSGSTTTVKQTSRSLAPSMRMTADLGDWDRSILNIPIGQSGQILSRHYSDQWLDYYNAR SFPMQFNKVEPASTLQFRPTR >Mature_740_residues SRNLVAHAVKYVNYAIAFALIIAAIAVYWYVWRPLPQRSGSIDAALSAPATVEFGAHGEPHIRAASLDDAFFLQGYVTAQ DRLFQMDALRRFAGGTLAEVFGPSLVESDREARKLRMRRIAEDAYGRLPDADRAAFAAYTRGVNQFIATHLNNLPVEFTL LRYQPRPWSTVDCLLLCLHMYRNLTTTWKDEIIKNNMLAQGDRAKVEFLFPMRGLVDGNPGSNAWVLSGKHTASGKPLLS NDMHLEYSLPGIWYMIYLDAPGLRVGGVSLPGAPGVIVGHNERIAWGITNLHFDVQDLYIEKFDDRTGRYLFRGQAEQAR AEREIIRVKDRPAVEVDTWITRHGPIFIADGTQRLALRWTAAETGMLQFPFIDVDRAQNWEQFTAAVKRLPGPGSNFVYA DVDGNIGYHAVGMLPRRRNYRGDIPVDGSSGNFEWDGFIPFEELPSVYNPPGGMIVTANQNPFPETFPYPLNGNFAPPQR FMQIRAMLSAHEGWRPSDMLTVQKDVYSAFSHFLARQIVDAYQRRNAHNPSLDDSVAMLREWNGQMDKDLPAPFLITLAY QHVRRAVAENASSASGLAYEFNMAPVVVQRLLTERPAGWFADYDDMLLRALADAVEEARRIQGREPKRWRYGQYLFIAIN NPVTHQIPLVGKYFDIGPVPMSGSTTTVKQTSRSLAPSMRMTADLGDWDRSILNIPIGQSGQILSRHYSDQWLDYYNARS FPMQFNKVEPASTLQFRPTR
Specific function: Unknown
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.11 [H]
Molecular weight: Translated: 83691; Mature: 83560
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNLVAHAVKYVNYAIAFALIIAAIAVYWYVWRPLPQRSGSIDAALSAPATVEFGAHGE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCC PHIRAASLDDAFFLQGYVTAQDRLFQMDALRRFAGGTLAEVFGPSLVESDREARKLRMRR CCEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCHHHHHHHHHHH IAEDAYGRLPDADRAAFAAYTRGVNQFIATHLNNLPVEFTLLRYQPRPWSTVDCLLLCLH HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHH MYRNLTTTWKDEIIKNNMLAQGDRAKVEFLFPMRGLVDGNPGSNAWVLSGKHTASGKPLL HHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCC SNDMHLEYSLPGIWYMIYLDAPGLRVGGVSLPGAPGVIVGHNERIAWGITNLHFDVQDLY CCCCEEEEECCCEEEEEEECCCCCEECCCCCCCCCEEEEECCCEEEEEEEEEEEEHHHHH IEKFDDRTGRYLFRGQAEQARAEREIIRVKDRPAVEVDTWITRHGPIFIADGTQRLALRW HHHHCCCCCCEEEECCHHHHHHHHHHEEECCCCCEEEHHEEECCCCEEEECCCCEEEEEE TAAETGMLQFPFIDVDRAQNWEQFTAAVKRLPGPGSNFVYADVDGNIGYHAVGMLPRRRN EECCCCEEECCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCC YRGDIPVDGSSGNFEWDGFIPFEELPSVYNPPGGMIVTANQNPFPETFPYPLNGNFAPPQ CCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHH RFMQIRAMLSAHEGWRPSDMLTVQKDVYSAFSHFLARQIVDAYQRRNAHNPSLDDSVAML HHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH REWNGQMDKDLPAPFLITLAYQHVRRAVAENASSASGLAYEFNMAPVVVQRLLTERPAGW HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCC FADYDDMLLRALADAVEEARRIQGREPKRWRYGQYLFIAINNPVTHQIPLVGKYFDIGPV CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCEECCCEECEECCCCC PMSGSTTTVKQTSRSLAPSMRMTADLGDWDRSILNIPIGQSGQILSRHYSDQWLDYYNAR CCCCCCHHHHHHHHHHCCCHHEECCCCCCCCCEEECCCCCCCCHHHHHHCHHHHHHHCCC SFPMQFNKVEPASTLQFRPTR CCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure SRNLVAHAVKYVNYAIAFALIIAAIAVYWYVWRPLPQRSGSIDAALSAPATVEFGAHGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCC PHIRAASLDDAFFLQGYVTAQDRLFQMDALRRFAGGTLAEVFGPSLVESDREARKLRMRR CCEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCHHHHHHHHHHH IAEDAYGRLPDADRAAFAAYTRGVNQFIATHLNNLPVEFTLLRYQPRPWSTVDCLLLCLH HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHH MYRNLTTTWKDEIIKNNMLAQGDRAKVEFLFPMRGLVDGNPGSNAWVLSGKHTASGKPLL HHHCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCC SNDMHLEYSLPGIWYMIYLDAPGLRVGGVSLPGAPGVIVGHNERIAWGITNLHFDVQDLY CCCCEEEEECCCEEEEEEECCCCCEECCCCCCCCCEEEEECCCEEEEEEEEEEEEHHHHH IEKFDDRTGRYLFRGQAEQARAEREIIRVKDRPAVEVDTWITRHGPIFIADGTQRLALRW HHHHCCCCCCEEEECCHHHHHHHHHHEEECCCCCEEEHHEEECCCCEEEECCCCEEEEEE TAAETGMLQFPFIDVDRAQNWEQFTAAVKRLPGPGSNFVYADVDGNIGYHAVGMLPRRRN EECCCCEEECCEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECCCCCCC YRGDIPVDGSSGNFEWDGFIPFEELPSVYNPPGGMIVTANQNPFPETFPYPLNGNFAPPQ CCCCCCCCCCCCCEEECCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHH RFMQIRAMLSAHEGWRPSDMLTVQKDVYSAFSHFLARQIVDAYQRRNAHNPSLDDSVAML HHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH REWNGQMDKDLPAPFLITLAYQHVRRAVAENASSASGLAYEFNMAPVVVQRLLTERPAGW HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCC FADYDDMLLRALADAVEEARRIQGREPKRWRYGQYLFIAINNPVTHQIPLVGKYFDIGPV CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCCCEECCCEECEECCCCC PMSGSTTTVKQTSRSLAPSMRMTADLGDWDRSILNIPIGQSGQILSRHYSDQWLDYYNAR CCCCCCHHHHHHHHHHCCCHHEECCCCCCCCCEEECCCCCCCCHHHHHHCHHHHHHHCCC SFPMQFNKVEPASTLQFRPTR CCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3680178 [H]