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The map label for this gene is yuxH [H]

Identifier: 116624015

GI number: 116624015

Start: 6221891

End: 6223120

Strand: Direct

Name: yuxH [H]

Synonym: Acid_4927

Alternate gene names: 116624015

Gene position: 6221891-6223120 (Clockwise)

Preceding gene: 116624013

Following gene: 116624019

Centisome position: 62.43

GC content: 64.39

Gene sequence:

>1230_bases
ATGCACAGCCCTGTCAAGATCGCGTCGGAAGGGAACGTCTACCTCGGCCGCCAACCGATCTATGGGGCGCGGCGCGAGAT
CCGCGCCTACGAACTGTTGTACCGGCGCCACGCTTCGGACACGACCGCCAGCTTTCAGGATCCCGACCAGGCCAGCGCGG
ACGTGATGCTGAAGGCCTTCCTGGAGATTGGGCTCGCCGCGGTTTCACCCGAACGACCCGTTTTCATCAATCACACGCGC
CACCTGCTGGCGCTCGACCCCATTCTGCCGGCCGACCGTTGTGTGGTCGAAGTGCTCGAAGACGTCACGGCAGATCCGGA
CACTGTGGCCTGCCTGCATCGTCTCAAGAGCCTGAATTACCGGATCGCGCTGGACGATTTCGTCTACGACGATTCACTGC
TGCCGATGATCGAGATCGCCGATTACATCAAGCTCGACCTGCTGGCGCTGGGCGCCGGCGGTTTCCATGAGCAGATGAAC
CTGCTGCACCGCTTCGACGTGCGCATCGTGGCCGAGAAGATCGAATCTGAAGCCGAATTCCGCTGGTGCCGCAAGATCGG
CTGCGACCTCTTCCAGGGCTACTACCTGCGCCGTCCCGAGGTGCTGGTGGGGCGCCGCATTCCCTCGAGCCAGCTTTCCG
TGCTCTCGCTGCTGGCGGAGTGCGCGGACCTGGAGAGCTCGGCCGGCGTGATCGCGGCAATCATCGCGCGCGACGCGCCT
CTGACCTACGGGCTGCTGCGGCTGGCGAATTCTGCGCTCTACCGCCACCGCAGTGAGATCCGCAGCCCGGCGCAGGCGGT
CACGTTGCTCGGGATGGATTTTGTTTTTCGCTGGGCGACGCTGCTGGCGCTATCCGGCAACGACGATTGTCCCGCCGGCT
ACCTGGAAGCCGCGCTGCAGCGTGCACGGATGGCAGAGCTGCTGGGCGTCCACTATCGCTGCTCCTCGCAGGAGGCTTAC
ATCGCCGGCCTGTTGAGCACGCTAGACGCAATCTTCAACGCGCCGCTCGAGGAATTGATCGTGCCGCTGCCCATCGATAT
CCGCTTCAAGCGCGCCATCCTGCAGCGCGAAGGCGCCCTCGGCGGCGTGCTCGATGCGGTTCTGGCGTATGAATCCGGCG
AATTCAGCGGCGTCGATCTTGCCGATGCCGCGATGCAGCGCGCGTTCTGGGAGGCCGCCGAGTATGCCCGTGCGATGATT
TCGCAGATGTCCGCGGCGATGACCGGCTAG

Upstream 100 bases:

>100_bases
AAGACATTTTTACCTGACCTCTAATTCCATGCAGGTAGGCTTCCGGAAAGAGTTCCTGCACATTCAAGAAACGGCAATCC
CGGCCGATTGGTAAGGATGG

Downstream 100 bases:

>100_bases
AGAGGCAGCCGTCCGCGCACGCGGCGCGCCTGGGCCATGTGGCGCCGTTCGTGGGCAGCCGCCTGGGCGAGCGTAGCGCC
GAGGCTTAACTTCAGCAGGG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MHSPVKIASEGNVYLGRQPIYGARREIRAYELLYRRHASDTTASFQDPDQASADVMLKAFLEIGLAAVSPERPVFINHTR
HLLALDPILPADRCVVEVLEDVTADPDTVACLHRLKSLNYRIALDDFVYDDSLLPMIEIADYIKLDLLALGAGGFHEQMN
LLHRFDVRIVAEKIESEAEFRWCRKIGCDLFQGYYLRRPEVLVGRRIPSSQLSVLSLLAECADLESSAGVIAAIIARDAP
LTYGLLRLANSALYRHRSEIRSPAQAVTLLGMDFVFRWATLLALSGNDDCPAGYLEAALQRARMAELLGVHYRCSSQEAY
IAGLLSTLDAIFNAPLEELIVPLPIDIRFKRAILQREGALGGVLDAVLAYESGEFSGVDLADAAMQRAFWEAAEYARAMI
SQMSAAMTG

Sequences:

>Translated_409_residues
MHSPVKIASEGNVYLGRQPIYGARREIRAYELLYRRHASDTTASFQDPDQASADVMLKAFLEIGLAAVSPERPVFINHTR
HLLALDPILPADRCVVEVLEDVTADPDTVACLHRLKSLNYRIALDDFVYDDSLLPMIEIADYIKLDLLALGAGGFHEQMN
LLHRFDVRIVAEKIESEAEFRWCRKIGCDLFQGYYLRRPEVLVGRRIPSSQLSVLSLLAECADLESSAGVIAAIIARDAP
LTYGLLRLANSALYRHRSEIRSPAQAVTLLGMDFVFRWATLLALSGNDDCPAGYLEAALQRARMAELLGVHYRCSSQEAY
IAGLLSTLDAIFNAPLEELIVPLPIDIRFKRAILQREGALGGVLDAVLAYESGEFSGVDLADAAMQRAFWEAAEYARAMI
SQMSAAMTG
>Mature_409_residues
MHSPVKIASEGNVYLGRQPIYGARREIRAYELLYRRHASDTTASFQDPDQASADVMLKAFLEIGLAAVSPERPVFINHTR
HLLALDPILPADRCVVEVLEDVTADPDTVACLHRLKSLNYRIALDDFVYDDSLLPMIEIADYIKLDLLALGAGGFHEQMN
LLHRFDVRIVAEKIESEAEFRWCRKIGCDLFQGYYLRRPEVLVGRRIPSSQLSVLSLLAECADLESSAGVIAAIIARDAP
LTYGLLRLANSALYRHRSEIRSPAQAVTLLGMDFVFRWATLLALSGNDDCPAGYLEAALQRARMAELLGVHYRCSSQEAY
IAGLLSTLDAIFNAPLEELIVPLPIDIRFKRAILQREGALGGVLDAVLAYESGEFSGVDLADAAMQRAFWEAAEYARAMI
SQMSAAMTG

Specific function: Involved In Resistance To Phages N4 And Lambda. [C]

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 45262; Mature: 45262

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSPVKIASEGNVYLGRQPIYGARREIRAYELLYRRHASDTTASFQDPDQASADVMLKAF
CCCCCEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LEIGLAAVSPERPVFINHTRHLLALDPILPADRCVVEVLEDVTADPDTVACLHRLKSLNY
HHHHHHHCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCE
RIALDDFVYDDSLLPMIEIADYIKLDLLALGAGGFHEQMNLLHRFDVRIVAEKIESEAEF
EEEEHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RWCRKIGCDLFQGYYLRRPEVLVGRRIPSSQLSVLSLLAECADLESSAGVIAAIIARDAP
HHHHHHHHHHHHCHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
LTYGLLRLANSALYRHRSEIRSPAQAVTLLGMDFVFRWATLLALSGNDDCPAGYLEAALQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHH
RARMAELLGVHYRCSSQEAYIAGLLSTLDAIFNAPLEELIVPLPIDIRFKRAILQREGAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCH
GGVLDAVLAYESGEFSGVDLADAAMQRAFWEAAEYARAMISQMSAAMTG
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHSPVKIASEGNVYLGRQPIYGARREIRAYELLYRRHASDTTASFQDPDQASADVMLKAF
CCCCCEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LEIGLAAVSPERPVFINHTRHLLALDPILPADRCVVEVLEDVTADPDTVACLHRLKSLNY
HHHHHHHCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCE
RIALDDFVYDDSLLPMIEIADYIKLDLLALGAGGFHEQMNLLHRFDVRIVAEKIESEAEF
EEEEHHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RWCRKIGCDLFQGYYLRRPEVLVGRRIPSSQLSVLSLLAECADLESSAGVIAAIIARDAP
HHHHHHHHHHHHCHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
LTYGLLRLANSALYRHRSEIRSPAQAVTLLGMDFVFRWATLLALSGNDDCPAGYLEAALQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHH
RARMAELLGVHYRCSSQEAYIAGLLSTLDAIFNAPLEELIVPLPIDIRFKRAILQREGAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHCCCH
GGVLDAVLAYESGEFSGVDLADAAMQRAFWEAAEYARAMISQMSAAMTG
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]