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The map label for this gene is atoS [C]

Identifier: 116623351

GI number: 116623351

Start: 5390793

End: 5393177

Strand: Direct

Name: atoS [C]

Synonym: Acid_4260

Alternate gene names: 116623351

Gene position: 5390793-5393177 (Clockwise)

Preceding gene: 116623350

Following gene: 116623353

Centisome position: 54.09

GC content: 61.72

Gene sequence:

>2385_bases
ATGGCACACCGTATTCAAAGCGAGCATCGCAGTGACGTAAAACTCGGCGCCTTGAATCGCCAGTTGACGCAGATCGCGAG
CCGCGTTTCGGCCGCCATCGGCAGCGATTTCTTCCGCTCAATGACCGAGCATCTCGCCAAGGTGCTCGCCGCCGACTGCG
TCTATATCGGCGAGTTCGTCGGCGGTCACACAGAGCGAGTCAAAACCCTGGCCGCCTGGAGGGAAAACCAGTCCGAAAAC
TTTTCCTTCGAGCTCGCCGGCAGCGCTGCCCTGCCCATCGCTCTCGGAAAGCCTTCGATCTGTAAGTCCCGCGCGCAAGT
CCGCTTTCCGTCGGACTCATTGCTCCAGAAGTGGGACGCCCACGCCTGTGTCGGCATTCCACTGATGAACTCCCGCGATC
TTCCCGCCGGTCTTATCATGACCGTCTATCGCAAACCGCTCCACGATATCAACGCCCCCAGGGAGATCCTGGAGATCTTT
GCGCCGCGCGCCGCCGATGAGCTGGAGCGCAGGCAGCAGGAAGAATTGCTCCGCGGCAGCGAGCAGCGCTATCGCGCCTT
TGTCGAGGACAATTCCGACGGCATGTGGCGGATTGAATTTGAGCCGCCGGTCTCCACCACCCTCAACGAACGCGAACAGC
TGGAAGCCATCTATCGGGATGGACATATCGCCGAATGTAACCTCGCCATGGCCCGGCAGCTCGGGGCGGAAAGCCCCGAG
CACCTCGTCGGAATGCCGCTTAAGGACATTGGTCCGCTGTCGAGCCCGGCAGTCCGCAATGCCACTATCTACGCCATCCG
CGCCGGCTATCGTTTTAACACCGTTGAAACATCGCCTGACGCGTCCGATGGCAAACGGCGCTATATGCTCCGCACCCAAT
GGGGCATCGTCGAGAATAACTTACTCCGCCGGCTGTGGGGCAGTACCCGGGATATAACTGAACTGAAACAATTCGAGAAA
GCCCTGGATGAAGCCGAACAGAAATTTTCGGGCCTGCTTCAAAACCTCCCGCTCATCGTGATGATCGCTCAGCCAAGTGG
CGACGTCGAATTCTGGAACGATCGTCTTTCCCGGCCCACCGGTTGGAAATCCTCCGATGTCGATGGCAGGAACTGGATCG
ACCTCATGATCCCTGCCGCCGAGCGCGCCAGGGTCCGGGCCGCCCTTCAGGCCGCCGTCGTCGAGCCTCCGCGCCCGGTT
CACTTCCAGAGCCCTTTTCTCGGGCCCGATGGCGAGCGCCGCTGGATCGCGTGGGACAGCACCAGCCTGCGCGATGCCGA
GGGGACTACCTTTTCGGTCGCGATCGTGGGCTGTGACATCACCGAATTCAAAGCCCTCGAGGCCCAGTTCCATCAGGCGC
AGAAGCTCGAGCACATTGGCCGCATGACCGGCGGCATCGCGCACGATTTCAATAATCTGCTCACAGTTGTCATGGGCCAC
ACAGGCGTGCTGCTGGATAAGACGCCTGGTTCCGATGCCGCTCGCAGTTTTCTGCTGCAGATCCTGGGCGCCGCCGAAAA
AGGCGCGGCACTCACCGAGCGCCTCTTCACCTTCAGCCGCCACCGCGTTCTCCGTCCCGAGATCCTCGACCCGGGGGGCC
TGATCGCCGACGACTTACACATGATCCGCCATCTCGCCGGAGATCGCATTAACGTAGTAAGTCACCTCGATGACTCGCCC
GCCTTCGTCCATGCCGACGCCGGACAGGTCCATCAAATCCTGCTGAACCTCGTCGTCAATGCGCGCGACGCCATGCAGTC
CGGCGGTACCCTCACCATCTCCACCTCCAACGCCGACTCGCGCTATGTTCAGATCGCCGTCGCCGATACCGGAACCGGCA
TGACCGATGAAGTCCGCAGCCATCTCTTTGAGCCCTTCTACACCACTAAAGCCGAGGGCAAGGGCACCGGGCTCGGCCTC
TCCATGGTCTATGGAATTGTCCAACAGAGCGGCGGGCATATTGAGGTAGATACTAACCCCGGCACCGGCACATCGATCCG
CATTTTCCTGCCCCAGGTTCAGCCGCCGCCCTCATCCGGCTTAGCGGCGGATGCCGCGGACGCCCCGGCCGGAGGCACCG
AAACCATCCTGCTCATTGAAGACCAGCCCGATGTGCGGACGCTCGCCGCCGGTATCCTCCGCGATCTCGGTTATCGGGTT
CTGGAGGCGCAGAATCCCATCCAATCCCTGCAATGGGTTCCTGATCTCGGCGGTGACCCCGTCCACCTGGTGGTGATCGG
ACTCGCGATGCCCAACCCGTCCGTCGAACAACTGGCCCGCACATTCGCGGAGTCCCGTTCCGCAACCAGGGTGCTGTGGC
TGCAGAAGCCCTTCACCCGCGAGTCCCTCGCCACGGCCGTCCGGGAATCTCTGGACCGTCAATAG

Upstream 100 bases:

>100_bases
GCCGGCGCTCACTAGCGGTAGACTCAGGTCACCACCCGAATAATTTCCATCACCTGCGCTCATCCCGGCATCCTTTCAAT
GCATCGTTTCCCCGTGAACT

Downstream 100 bases:

>100_bases
CCAAAAAGACGGCCGGCGGCTCGCTTTCGCGGCCGCCGGCAGAATGTGACCGTCAGGGAGCGGTCGCTAATCGCTCAGTA
ACCGAGCCGCGACCGTAAGG

Product: PAS/PAC sensor hybrid histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 794; Mature: 793

Protein sequence:

>794_residues
MAHRIQSEHRSDVKLGALNRQLTQIASRVSAAIGSDFFRSMTEHLAKVLAADCVYIGEFVGGHTERVKTLAAWRENQSEN
FSFELAGSAALPIALGKPSICKSRAQVRFPSDSLLQKWDAHACVGIPLMNSRDLPAGLIMTVYRKPLHDINAPREILEIF
APRAADELERRQQEELLRGSEQRYRAFVEDNSDGMWRIEFEPPVSTTLNEREQLEAIYRDGHIAECNLAMARQLGAESPE
HLVGMPLKDIGPLSSPAVRNATIYAIRAGYRFNTVETSPDASDGKRRYMLRTQWGIVENNLLRRLWGSTRDITELKQFEK
ALDEAEQKFSGLLQNLPLIVMIAQPSGDVEFWNDRLSRPTGWKSSDVDGRNWIDLMIPAAERARVRAALQAAVVEPPRPV
HFQSPFLGPDGERRWIAWDSTSLRDAEGTTFSVAIVGCDITEFKALEAQFHQAQKLEHIGRMTGGIAHDFNNLLTVVMGH
TGVLLDKTPGSDAARSFLLQILGAAEKGAALTERLFTFSRHRVLRPEILDPGGLIADDLHMIRHLAGDRINVVSHLDDSP
AFVHADAGQVHQILLNLVVNARDAMQSGGTLTISTSNADSRYVQIAVADTGTGMTDEVRSHLFEPFYTTKAEGKGTGLGL
SMVYGIVQQSGGHIEVDTNPGTGTSIRIFLPQVQPPPSSGLAADAADAPAGGTETILLIEDQPDVRTLAAGILRDLGYRV
LEAQNPIQSLQWVPDLGGDPVHLVVIGLAMPNPSVEQLARTFAESRSATRVLWLQKPFTRESLATAVRESLDRQ

Sequences:

>Translated_794_residues
MAHRIQSEHRSDVKLGALNRQLTQIASRVSAAIGSDFFRSMTEHLAKVLAADCVYIGEFVGGHTERVKTLAAWRENQSEN
FSFELAGSAALPIALGKPSICKSRAQVRFPSDSLLQKWDAHACVGIPLMNSRDLPAGLIMTVYRKPLHDINAPREILEIF
APRAADELERRQQEELLRGSEQRYRAFVEDNSDGMWRIEFEPPVSTTLNEREQLEAIYRDGHIAECNLAMARQLGAESPE
HLVGMPLKDIGPLSSPAVRNATIYAIRAGYRFNTVETSPDASDGKRRYMLRTQWGIVENNLLRRLWGSTRDITELKQFEK
ALDEAEQKFSGLLQNLPLIVMIAQPSGDVEFWNDRLSRPTGWKSSDVDGRNWIDLMIPAAERARVRAALQAAVVEPPRPV
HFQSPFLGPDGERRWIAWDSTSLRDAEGTTFSVAIVGCDITEFKALEAQFHQAQKLEHIGRMTGGIAHDFNNLLTVVMGH
TGVLLDKTPGSDAARSFLLQILGAAEKGAALTERLFTFSRHRVLRPEILDPGGLIADDLHMIRHLAGDRINVVSHLDDSP
AFVHADAGQVHQILLNLVVNARDAMQSGGTLTISTSNADSRYVQIAVADTGTGMTDEVRSHLFEPFYTTKAEGKGTGLGL
SMVYGIVQQSGGHIEVDTNPGTGTSIRIFLPQVQPPPSSGLAADAADAPAGGTETILLIEDQPDVRTLAAGILRDLGYRV
LEAQNPIQSLQWVPDLGGDPVHLVVIGLAMPNPSVEQLARTFAESRSATRVLWLQKPFTRESLATAVRESLDRQ
>Mature_793_residues
AHRIQSEHRSDVKLGALNRQLTQIASRVSAAIGSDFFRSMTEHLAKVLAADCVYIGEFVGGHTERVKTLAAWRENQSENF
SFELAGSAALPIALGKPSICKSRAQVRFPSDSLLQKWDAHACVGIPLMNSRDLPAGLIMTVYRKPLHDINAPREILEIFA
PRAADELERRQQEELLRGSEQRYRAFVEDNSDGMWRIEFEPPVSTTLNEREQLEAIYRDGHIAECNLAMARQLGAESPEH
LVGMPLKDIGPLSSPAVRNATIYAIRAGYRFNTVETSPDASDGKRRYMLRTQWGIVENNLLRRLWGSTRDITELKQFEKA
LDEAEQKFSGLLQNLPLIVMIAQPSGDVEFWNDRLSRPTGWKSSDVDGRNWIDLMIPAAERARVRAALQAAVVEPPRPVH
FQSPFLGPDGERRWIAWDSTSLRDAEGTTFSVAIVGCDITEFKALEAQFHQAQKLEHIGRMTGGIAHDFNNLLTVVMGHT
GVLLDKTPGSDAARSFLLQILGAAEKGAALTERLFTFSRHRVLRPEILDPGGLIADDLHMIRHLAGDRINVVSHLDDSPA
FVHADAGQVHQILLNLVVNARDAMQSGGTLTISTSNADSRYVQIAVADTGTGMTDEVRSHLFEPFYTTKAEGKGTGLGLS
MVYGIVQQSGGHIEVDTNPGTGTSIRIFLPQVQPPPSSGLAADAADAPAGGTETILLIEDQPDVRTLAAGILRDLGYRVL
EAQNPIQSLQWVPDLGGDPVHLVVIGLAMPNPSVEQLARTFAESRSATRVLWLQKPFTRESLATAVRESLDRQ

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=266, Percent_Identity=28.9473684210526, Blast_Score=113, Evalue=6e-26,
Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=29.0748898678414, Blast_Score=106, Evalue=7e-24,
Organism=Escherichia coli, GI1788713, Length=254, Percent_Identity=27.1653543307087, Blast_Score=78, Evalue=3e-15,
Organism=Escherichia coli, GI87081816, Length=312, Percent_Identity=23.0769230769231, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI145693157, Length=130, Percent_Identity=31.5384615384615, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790300, Length=260, Percent_Identity=27.6923076923077, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 87389; Mature: 87258

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRIQSEHRSDVKLGALNRQLTQIASRVSAAIGSDFFRSMTEHLAKVLAADCVYIGEFV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGHTERVKTLAAWRENQSENFSFELAGSAALPIALGKPSICKSRAQVRFPSDSLLQKWDA
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCHHHHCCCCEECCCHHHHHHCCC
HACVGIPLMNSRDLPAGLIMTVYRKPLHDINAPREILEIFAPRAADELERRQQEELLRGS
CCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
EQRYRAFVEDNSDGMWRIEFEPPVSTTLNEREQLEAIYRDGHIAECNLAMARQLGAESPE
HHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCH
HLVGMPLKDIGPLSSPAVRNATIYAIRAGYRFNTVETSPDASDGKRRYMLRTQWGIVENN
HHCCCCHHHCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCCCEEEEEECCCHHHHH
LLRRLWGSTRDITELKQFEKALDEAEQKFSGLLQNLPLIVMIAQPSGDVEFWNDRLSRPT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCC
GWKSSDVDGRNWIDLMIPAAERARVRAALQAAVVEPPRPVHFQSPFLGPDGERRWIAWDS
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
TSLRDAEGTTFSVAIVGCDITEFKALEAQFHQAQKLEHIGRMTGGIAHDFNNLLTVVMGH
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TGVLLDKTPGSDAARSFLLQILGAAEKGAALTERLFTFSRHRVLRPEILDPGGLIADDLH
CEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
MIRHLAGDRINVVSHLDDSPAFVHADAGQVHQILLNLVVNARDAMQSGGTLTISTSNADS
HHHHHCCCCEEEHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
RYVQIAVADTGTGMTDEVRSHLFEPFYTTKAEGKGTGLGLSMVYGIVQQSGGHIEVDTNP
EEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
GTGTSIRIFLPQVQPPPSSGLAADAADAPAGGTETILLIEDQPDVRTLAAGILRDLGYRV
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
LEAQNPIQSLQWVPDLGGDPVHLVVIGLAMPNPSVEQLARTFAESRSATRVLWLQKPFTR
HHCCCHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCH
ESLATAVRESLDRQ
HHHHHHHHHHHCCC
>Mature Secondary Structure 
AHRIQSEHRSDVKLGALNRQLTQIASRVSAAIGSDFFRSMTEHLAKVLAADCVYIGEFV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGHTERVKTLAAWRENQSENFSFELAGSAALPIALGKPSICKSRAQVRFPSDSLLQKWDA
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCHHHHCCCCEECCCHHHHHHCCC
HACVGIPLMNSRDLPAGLIMTVYRKPLHDINAPREILEIFAPRAADELERRQQEELLRGS
CCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC
EQRYRAFVEDNSDGMWRIEFEPPVSTTLNEREQLEAIYRDGHIAECNLAMARQLGAESPE
HHHHHHHEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCH
HLVGMPLKDIGPLSSPAVRNATIYAIRAGYRFNTVETSPDASDGKRRYMLRTQWGIVENN
HHCCCCHHHCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCCCEEEEEECCCHHHHH
LLRRLWGSTRDITELKQFEKALDEAEQKFSGLLQNLPLIVMIAQPSGDVEFWNDRLSRPT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCC
GWKSSDVDGRNWIDLMIPAAERARVRAALQAAVVEPPRPVHFQSPFLGPDGERRWIAWDS
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
TSLRDAEGTTFSVAIVGCDITEFKALEAQFHQAQKLEHIGRMTGGIAHDFNNLLTVVMGH
CCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TGVLLDKTPGSDAARSFLLQILGAAEKGAALTERLFTFSRHRVLRPEILDPGGLIADDLH
CEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
MIRHLAGDRINVVSHLDDSPAFVHADAGQVHQILLNLVVNARDAMQSGGTLTISTSNADS
HHHHHCCCCEEEHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
RYVQIAVADTGTGMTDEVRSHLFEPFYTTKAEGKGTGLGLSMVYGIVQQSGGHIEVDTNP
EEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
GTGTSIRIFLPQVQPPPSSGLAADAADAPAGGTETILLIEDQPDVRTLAAGILRDLGYRV
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
LEAQNPIQSLQWVPDLGGDPVHLVVIGLAMPNPSVEQLARTFAESRSATRVLWLQKPFTR
HHCCCHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCH
ESLATAVRESLDRQ
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA