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The map label for this gene is 116623252

Identifier: 116623252

GI number: 116623252

Start: 5275721

End: 5276686

Strand: Reverse

Name: 116623252

Synonym: Acid_4159

Alternate gene names: NA

Gene position: 5276686-5275721 (Counterclockwise)

Preceding gene: 116623253

Following gene: 116623251

Centisome position: 52.95

GC content: 66.98

Gene sequence:

>966_bases
ATGCCGGTACTCTTCCTGGTAGCGGCGGCGACCGTGGTTCTCACCTACCGGCTGCTGTGGATGGGCCTGGAGCGGCGCGA
TGCGGCCCTGGCGGTACGGCGGCTTTCGGCGCGGCCGGCCGGCAGGGAAGACGCCGGGCGCGGGCGGCCGCGATTGATCG
AGGGCGCGGGCGAAGCGCGGGGGGTGTTGACTTCGCGGCTGCTGGAAGGGCTGCGCCTGCGCGACGCAGCCGCGCATTTG
CTGGAGACGGCGGCGCTCAAGTGGGGTCCGGCGGGACTGCTGCAGCGCTCCGTGGCGATGTTCCTGGGCGGGTTTGTGGC
GGCGACGGTCGCAACCGCCAACCAGGCGCCGCTCGCCGCGCTGGCGGCCGGTGCGGTGCTCGGCTGCGGTCCTCTGTGGT
ACGTAAGGCGCAAGGCGCGAATGCGGGTGGCGGCCTTCGAAGATCAATTTCCCGACTGCCTGGAGTTTGTGTCGCGCTCC
ATGCGCGCCGGGCATGCGTTTTCGGTGGCGATCGAAATGGCGCATCGCGAATTCAGCGATCCGCTGGCGGGGGAATTGCG
GCGCGCCTTCGAGGAACAAAACCTGGGACAGCCGCTCGAGATCGTGCTGCGCAAACTTTCGCAGCGCGTGCCTTCGATGG
ATGTGCAGTTTTTCGTTTCGGCGGTGCTCCTGCAAAAGCGCACCGGCGGCAACCTGGCGGAGCTGCTGGATAAGCTGGCG
CAACTGATGCGGGAGCGCTTCAAGCTGCGCGCGCGCATCCGGGCGGTGAGCGCCCAGGGGCTGATGTCGGGGCGGATTCT
CTCGGCGATTCCGGCGGGTGTAGCGGTGATGATGTTCCTGGTGAACCCGAAATACGCGCGCTTTTTCATCGACGACCCCG
TGGGGCATGAGTTGATGGCGGCGGGCCTGGGCTTGCAACTCCTGGGATACCTGATCATCAGAAAGATCGTGACGTTCGAC
GTTTAG

Upstream 100 bases:

>100_bases
CCACCGGGATTATGCCCAAGTTCAACGAAAAGCTGGTGGCATCGGGGATGCGGCTGCCCTCGGAGATCTTCAACGAACGA
GTGCAAGCCGGAGGTTTCTG

Downstream 100 bases:

>100_bases
ATATCAAGGTGTAGGTGTCGAGGTGTAGGCATGCTGGAAGCGATGACGGCGGCGATCTTTGTGCTGGTGGCGGGCGGCAC
GGCGTGGGCCGCGCTGCGAG

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Integral Membrane Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Type II Secretion System F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MPVLFLVAAATVVLTYRLLWMGLERRDAALAVRRLSARPAGREDAGRGRPRLIEGAGEARGVLTSRLLEGLRLRDAAAHL
LETAALKWGPAGLLQRSVAMFLGGFVAATVATANQAPLAALAAGAVLGCGPLWYVRRKARMRVAAFEDQFPDCLEFVSRS
MRAGHAFSVAIEMAHREFSDPLAGELRRAFEEQNLGQPLEIVLRKLSQRVPSMDVQFFVSAVLLQKRTGGNLAELLDKLA
QLMRERFKLRARIRAVSAQGLMSGRILSAIPAGVAVMMFLVNPKYARFFIDDPVGHELMAAGLGLQLLGYLIIRKIVTFD
V

Sequences:

>Translated_321_residues
MPVLFLVAAATVVLTYRLLWMGLERRDAALAVRRLSARPAGREDAGRGRPRLIEGAGEARGVLTSRLLEGLRLRDAAAHL
LETAALKWGPAGLLQRSVAMFLGGFVAATVATANQAPLAALAAGAVLGCGPLWYVRRKARMRVAAFEDQFPDCLEFVSRS
MRAGHAFSVAIEMAHREFSDPLAGELRRAFEEQNLGQPLEIVLRKLSQRVPSMDVQFFVSAVLLQKRTGGNLAELLDKLA
QLMRERFKLRARIRAVSAQGLMSGRILSAIPAGVAVMMFLVNPKYARFFIDDPVGHELMAAGLGLQLLGYLIIRKIVTFD
V
>Mature_320_residues
PVLFLVAAATVVLTYRLLWMGLERRDAALAVRRLSARPAGREDAGRGRPRLIEGAGEARGVLTSRLLEGLRLRDAAAHLL
ETAALKWGPAGLLQRSVAMFLGGFVAATVATANQAPLAALAAGAVLGCGPLWYVRRKARMRVAAFEDQFPDCLEFVSRSM
RAGHAFSVAIEMAHREFSDPLAGELRRAFEEQNLGQPLEIVLRKLSQRVPSMDVQFFVSAVLLQKRTGGNLAELLDKLAQ
LMRERFKLRARIRAVSAQGLMSGRILSAIPAGVAVMMFLVNPKYARFFIDDPVGHELMAAGLGLQLLGYLIIRKIVTFDV

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35100; Mature: 34969

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLFLVAAATVVLTYRLLWMGLERRDAALAVRRLSARPAGREDAGRGRPRLIEGAGEAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHH
GVLTSRLLEGLRLRDAAAHLLETAALKWGPAGLLQRSVAMFLGGFVAATVATANQAPLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LAAGAVLGCGPLWYVRRKARMRVAAFEDQFPDCLEFVSRSMRAGHAFSVAIEMAHREFSD
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PLAGELRRAFEEQNLGQPLEIVLRKLSQRVPSMDVQFFVSAVLLQKRTGGNLAELLDKLA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
QLMRERFKLRARIRAVSAQGLMSGRILSAIPAGVAVMMFLVNPKYARFFIDDPVGHELMA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
AGLGLQLLGYLIIRKIVTFDV
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVLFLVAAATVVLTYRLLWMGLERRDAALAVRRLSARPAGREDAGRGRPRLIEGAGEAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCHHH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HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA